HMM Seed Alignment: TIGR01947
Download Alignment>SP|Q8KA18|RNFG_BUCAP/11-195
ACLMGFFSFFSLSSVIFVKNITNNQIKNIKEKQKNTLIQQVIPRV.....MYH.SFEKKYFLIKD.KLLGDQ......KK
HNLWLLFKNKQAKVAVVESIAPDGYSGSISILVAAYL.NG..KIIGVRVLSH.KETPGIGDKIEISISNWITK......F
QDMN..............VIDLKDKKFLLKKYGGKIEQFTGATITPQSVSNAVKRTVVFIKK
>SP|P44291|RNFG_HAEIN/11-194
GILLGFIALLCTIISAGIFFLTKDKIDAVIAAQQRELLLQVIPQD.....YFNNNLLESAVIPQD.KNFVG........I
QKIYFAKKDGNVSAYAYETTAPDGYSGDIRLLVGLDP.KG..EVLGVRVIEH.HETPGLGDKIERRISNWILG......F
TNQS..............INEHNLSEWAVKKDGGKFDQFSGATITPRAVVNQTKRSALIMLN
>SP|P77285|RNFG_ECOLI/9-193
GITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAE.....RYNNALAQSCYLVTA.PELG.K......GE
HRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADF.NG..TVLGTRVTEH.HETPGLGDKIELRLSDWITH......F
AGKK..............ISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQT
>SP|P97054|RNFG_RHOCA/23-204
GIMLAMFALVTAVLLAVANDSTSAPIAARGAEDLAASLEQVIPHD.....LHDNDLAAAMRPVSDA...EEG......TI
KVYVATKAGAVTG.LAYELSGP.GYSGQIRVLLGIAP.DG..TLLGVRVLSH.TETPGLGDKIEVAKDDWILG......F
AGKS..............LADPEPGHWKVKRDGGVFDQFSGATITPRAVVKTIYRGLMFFDR
>SP|Q9EVN3|RNFG_PSEST/35-216
ALSLGLVCALVAVALLLGNQLTHQRIVDAERQDRLAVLRQVLPQA.....LYDNDPLADAFNVEDA...ELG......LI
EVYPARRAGQLTA.TAFQISTV.GYGGPIVQFIALDS.EG..RILGVRVLSH.KETPGLADKIEVTRSDWIKA......F
DGLS..............LASTPLDQWAVKKDGGQFDQFAGATITPRAIVKGVLRALEFQAR
>OMNI|NT01MC3831/26-208
GLVLMAVGAIATTILATTNAATEGAIAEAVRLDTLKALRSVLPVG......YDNDPVEDTVMLADVGLNKKG......TP
VKFYRSRKGDQAMAAAFVVTAPDGYSGDIDTIMAVSV.DG..TVTGIQVVNH.KETPGLGDKIEASKSDWAES......F
RGKR..............LDT...FKWGVKKDGGGFDQFAGATITPRAVVKSVKYGLEFFVK
>SP|Q9HYB6|RNFG_PSEAE/13-199
ALLLGLFALVGVGLVALVQQFTEARIAEAQREARGRALLELLPPG.....SYDNHPLDSQVPTFAPKLLGLD......AP
RPAYVARLHGQASAVILQASAPDGYSGAIQLLVGVTA.QG..RLLGVRVVAH.KETPGLGDRIELAKSPWVHG......F
DGKS..............LGDPADAGWAVKKDGGTFDQFAGATVTPRAVVRAVHKALRYFDA
>OMNI|PP1094/8-188
VGLLLLTGVLAVSATLAWRQWTGPVIAGAEKQLQSRQRLAVLPDG.....SYDNQPLESPLPRPAAQRP.NS......RI
LAAYRATMAGKPSAIILITQA.QGYAGPIVLSVAITT.DG..RLIGSQVVEQ.QESPGLGDRLGDPRLHWLSQ......F
NNRD..............HGD...H.WALKRDQGDFDQLAGATVTSRAVIAALQDALSYFDE
>OMNI|PG0306/2-184
LLSLTGFCIVVSAALGMMNEITKEPIAKAEVDAKVTAIKQVVNAF......DNNPYEERFEV..DVDGAK.L......T.
..VFPAKKGQEIVGYAVESYTDKGFSGKFTVMYGFDMDG...KIHDFSVLSH.SETPGLGAKMQ..EWFRT........P
AKKE......GLIQDVRGVQMSDTPLTVSKDG.GQVDAITAATISSRAFLDAMDRAYRGFKA
>OMNI|NTL03CP1062/8-182
GIILCLITSFAGVFLGFANEFTKEVIAQNAKLSADDL.KEILP........KANKLED.FTFEKNEDST.........IS
E.VFQAKSDSENEGYIIKVSP.KGFNGPIDMVVAIDKNR...EISGVKVLSQ.AETPGLGAKVE..ESSFSEK......F
KGLT..............IEDNIKIVKTSPSSQGEIQGITGATISSNAVSSGINDAISFYKE
>OMNI|NTL01FN0089/9-173
GIVLGLIAAISAGLLGGVNDFTSKVIAENTLKIVNEARKEVLP........EATSFKE..DEAKEADG..........MQ
Y.IPGFNDAGEVIGYVASVTE.AGYGGDINFVVGIDKDA...KVTGLNVVTS.SETPGLGAKIN..GKEWQEH......W
IGK.......................DSTYEFNKSVDAFAGATISPSAVYRGVIRALNTYQN
>OMNI|NTL02MA0649/11-185
IVTMVVISAVAAALLALTYTPTQAQLKLLQAEQQKEAMKEILP........QAADFEPVTGSEVDDDGNP.V......VL
Y.YKGVDSSGNVVGYVVERNQ.VGAQGMIQLLAGISSDFS..TITGFQVMKH.SETPGLGALIT..TPEFQGQ......F
VDLP..............VAD.....TSLTKNGGQVDAISGATISSQAVVDALHSAVDYVSA
>OMNI|TM0246/8-221
GLILMVFTAISGLFLGLVYVGVKGKIQEADNAAKLSAIKFVLKDPLTGDYLVDEKEIEEIVKKTGIETVVLKEYKEGVVL
GPLYEFVTKDGRNAYVLSGYAP.GFGGNVTVVACFIKTEDGFMLNSVRVIDYSQETPGLGAKIGEESIQRRFFPVPPEGL
KNGLRVDKDAG.......LPKGSPEELKKQGIVKVSDVMTGATITPRAVVTALNLMYRYLEE
>SP|Q9KT90|RNFG_VIBCH/9-194
GLILAVFACVSTGLVALTYALTAEQIQQQEQKQLLQVLNQVIPHK.....YHDNPLAQACTLVND.DKLGTA......KT
MHAYLAQRDGQPTAIAIETIAPDGYNGEIKLIVGIAN.NG..TVLGVRVLAH.QETPGLGDKIDLRISNWVLG......F
NGQQ..............VTADNQDDWKVRKDGGQFDQFTGATITPRAVVLAVKKAVEYVNQ