HMM Seed Alignment: TIGR01980

Download Alignment

>SP|Q55790|Y074_SYNY3/12-471
QPYKYGFVTNIE.ADAIPRGLSEDVVRLISAKKNEPEFMLDFRLRAYRHWLTMAEP.TWPA.VHYPPIDYQDIIYYSAP.
.....KQSKK...KLESLDEVDPALLETFEKLGIPLSEQ.KRLSNVAVDAIFDSVSIGTTFKEKLAEDGVIFCSISEALQ
EHPDLVQKYLGSV.VPTADNFFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTGQFERTLIIAEEGASVSYLEG
CTAPMYDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSC
VLVGDNSVGEFYSIALTNNKQQADTGTKMIHIGKNTRSIIISKGISAGNSANSYRGLVKMGPKAQGARNYSQCDSMLIGD
RAAANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPMEFAAEADKLL
>OMNI|NTL01WB0406/19-479
TDYKEGFSTILK.TEELEHGINEKVVKDISEKRQEPEWMLRFRLKAYDAWTKMKEP.HWLN.GKFENIDYNKYIYYSAPD
CNEFKK.EKK...NNNNTKYLTKEVKNTFNKLGIPTSEK.NNIA...IDAIFDSVSVSTTYQKFLKKIGIIFCSFSDAIK
KYPKLVKEYLGSV.VPVNDNFFAALNSAVASDGTFIYVPKGVRCPMELSTYFRINSANTNQFERTILIADEFSYISYIEG
CSAPIRNNYQLHAAVVEVILLNNARVKYSTVQNWFPGK.KNKGGILNFVTKRALCKGKESKMSWTQSETGSAITWKYPSV
ILKGDKSVGEFFSIALTKSYQQADTGTKMIHIGKDTKSTIISKTISSGKSNNTYRGLVKILPLAKNSRNFTQCDSMLIGS
NCGAHTFPYIEVFNKKSNIEHEATTSKIEENQIFYCQQRGIKVEDAISMIVNGFCKEIFSKLPLEFAIEAQKLL
>OMNI|NTL01OI2376/9-456
DEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYNRPMP.QWG..GDLSGLDFDEIVYYVKP.
.......SEK...QGRTWDEVPEEIKQTFDKLGIPEAEQ.KYLAG..VSAQYESEVVYHSLKEDLQDLGIIFKDTDTALK
ENEELFKEYFGKV.IPYSDNKFSALNSAVWSGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEG
CTAPVYTTNSLHSAVVEIIVKKDAYCRYTTIQNWANN.......VYNLVTKRATCD.ANATMEWIDGNIGSKLTMKYPAI
LLKGEGARGNTLSIALAGKGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLVHFGRKADGARANIECDTLIMDN
ESTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLI
>OMNI|NTL02SM1177/4-451
RDYAFGFHDDVKPLYSTGKGLTEEVVRDISEIKNEPQWMLDYRLRCLELFYKLPMP.KWG..PDLSGINFNDVIYYQKL.
.......SGQ...PSRSWDDVPDDIKKTFERLGIPNAER.QFLSG..AVAQYESEVVYHNMKEEFEKMGIIFTDTDTALQ
EYPDLVKKYFASV.VSPAEHKFAALNGAVWSGGTFIYVPKGVQCQIPVQTYFRINGENAGQFERSLMIIEEGASIQYIEG
CTAPTYSTNSLHAATVEIIVKRDASFRYTTIQNWSDN.......VYNLVTERGTVE.ENGTLEWIDGNLGSKVNMKYPCS
ILNGRQARTSVLSMSFANYGQHLDAGCKVYHNAPRTSSTLISKSVAKDGGKTDYRGSVTFGKNSAGSKSHIECDTILMDG
ESSSDTIPFNEIHNSDVSLEHEAKVSKVSEEQLYYIMSRGISEEEATAMIINGFMDPITKELPMEYAVELNALI
>OMNI|NTL01BL0818/42-490
GDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEKPMP.DWG..VDLSGFNADDFKYYVKP.
.......IDK...QAKSWDELPDDIRNTYDRLGIPEAEKNRLVSG..VAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVR
EYPELVKKYFGTV.VPPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEG
CTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNWSNN.......VYNLVTQRAYVR.EGGTMEWVDGNIGSKATMKYPAC
ILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDD
FSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLV
>OMNI|NTL01CA3236/13-459
.RGVYDIKNEDRYSYKVNKGLTPEIIEKISKEKHDPKWMLDFRLKCLDVYNKTELP.SWG..PSLDELDMDNIVTYVRP.
.......DTE...MKGSWNEVPDDIKDTFEKLGIPKAER.ESLAG..VGAQYDSEVVYHSIKEDLVKQGVIYTDMETAIN
KYEDIVKEYFMKL.VPPSDHKFVALHGAVWSGGSFVYVPEGVNVDIPLQSYFRLNSPGAGQFEHTLIIVEKGATLHFIEG
CSAPKYNVTNLHAGCVELYVKEDATLRYSTIENWSKN.......MLNLNTKRAVVE.KNGTIEWVSGSFGSKISMLYPMS
ILKGEGAKSEYTGVTFAGEGQHLDTGTKVVHAAPYTSSTISAKSISKGGGTCIYRGSVKVTENAHHCKSSVSCDSLMLDD
ISQSDTIPALDLANDEVDIGHEAKIGRISDDAIFYLMSRGVSEDEARAMIVRGFVNPISKALPLEYAVEMNNLI
>OMNI|NTL01TT2474/11-458
.FSIYNIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYEKMPMP.TWG..VDLSQLDINSIVAYIRP.
.......SAR...KKTSWEEVPEEIRRTFERLGIPEAEK.KALAG..VGAQYDSEVIYHNMKESLARQGVIFEDMDTALK
KYPDIIREYFMTKNVLPTDHKFAALHAAVWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIEG
CSAPLYSVSNLHAGCVELFVKEGARIIYSTIENWSKN.......TYNLNTKRAIVE.RDGMVEWISGSFGSKKTMLYPAS
VLVGKGAKAEYTSITFAAKGQHLDTGAKMIHLAPYTSSKILAKSISKDGGISTYRGLLKVGPEAEGVKASVTCEGLMLDD
ISKSDTIPVIDIENDNVDIGHEAKVGRISEEQIYYLMSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLI
>OMNI|NTL01HS00408/11-465
TEARFEFKKEENSAFESEKGLTEETIRVISEDKDEPDWMLDRRLRALEQYTKMPMPTDWPGQPDLTELDIEEIVPYIRP.
.......DVDKRSGADEWEDLPDEIQDTFEQLGIPEAER.NALSG..VGAQYESEVVYQNMQERWEEKGVVFCNMDEAVQ
EYPELVKEHFMTSCVPPSDNKFAALHGAVWSGGSFVYVPEDVTVNMPVQAYFRMNSEGMGQFEHTLIIAEEGSEVHYIEG
CSAPKYGSHNLHSGGVEVFVGEDAHVQYSTVQNWSKN.......TFNLNTKRAVVE.GNGTMEWVSGSMGSKATMLYPST
ILKGRGATDNHITIAFAGDGQDIDTGAKVYHNAPDTSSTIESKSIAKDGGRTNYRGLVHIADGAEDSKTNVECDALMFDN
DSTSDTMPYMEINESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELNRLI
>OMNI|NTL04PA1256/18-463
.EEVLGIEKKFSYQVELKGRITKDMVEEISRLKGEPDWMRRLRLRMLELFEKLPTP.KWVR.A.VQEIDLEALVHYAKP.
.......QTET..VS.SWDQLPKEIREYYEKLGLPEIEA.KALLG..LGAQFDSEIIYFNLKKKLQEKGVIMLPMEEAVR
KYPDLVQRYFMRV.FPP.EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKDAYVHWIEG
CSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNWSRN.......VVNFNNKRAIAE.ARAKVHWVEGSIGSKTTYTFPST
VLKGEGASTEIVGITAAKGTYWKENGAKVWHLAPRTSSRVVNKSISAEGGVAVYRGIVHVQRGAKYAKSHVQCDSLVLDK
DSATLTVPHDQVFEETAVVTHEATASTISEEKLAYLRARGFTEDDAKAAIVLGFVGDILKDLPFEYAVVLGRVI
>OMNI|NTL01TA00201/23-470
GSLDYGFHDNINPVYSTGKGLSRQVVEEISEIKKEPDWMRRIRLHAYEIFMSKPVP.TWG..PDLSGIDWENMTYYSRP.
.......DEV...KATNWDEVPKEIKDTFEKLGVPEMER.KYLAG..SIAQYDSEGIYNSIKKEWEEKGVVFMDLDSALK
RYPDLVKEYFAKA.VPPSDNKFAALNVAVWSGGAFLYVPRGVHVDMPLQTYFRINGEATGQFEHTIVVADEGSSVHYLEG
CTAPVYSKDSLHAAIVEYYVMKNAHGRYTSVQNWSNS.......VYNMPTKRAWVE.ENGNMEWVGGSLGSKVTMIYPSS
YLRGRNATTSNLNIALAGPGTVKDTGAKAIHMAPNTSSKIIAKSVSLGDGKSIYRGLVRINKDAVNAKSHVQCDALLIND
ESVSYTMPHDEIYEPTANFTHEATVGKIGTEELTYLRSRGLSEDEASSLIVLGFLDDVMKEIPMEFAVEMNRLV