HMM Seed Alignment: TIGR02094

Download Alignment

>OMNI|NTL01PH01552/112-699
IIYLCMEYGIGKSLPIYSGGLGILAGDHLKTASDLGLPMVAIGLLYKHGYFKQEIDINGRQIERFPEYNVKEMPIRQVLD
NDGSPLLIDVPIED.RMIKARVFLVE.VGRVKLYLLDTDVPENSEADRKICDYLYNAEPDKRIKQEILIGIGGMRLLKAL
E...IDP..GVVHLNEGHAAFANFERIRWFI.EKGLSFEEALEIVRGTSVFTTHTPVPAGHDVFPVEFVREK.......L
RAFFDGLPEDKLLGLGKVN..D.S..DPNFNMTVLAIRTSEFVNAVSKLHAKVTREMWANLWPGVPPDEIPIEPITNGIH
TPTWVNENLAKLYEIYIGKIWR.EHVNLEGIWY.AIERIPDHELWEAHLKAKRELIELIRRKIMKR..NERLGIDEPIPD
...VD......ENALIIGFARRFATYKRAILLFTDLERLKRIVNN.RDRPVYIIFGGKAHPMDEAGKEYLRRVYEVSQMP
EFKGKIILIENYDLGSARILISGVDVWLNTPKRPLEASGTSGMKAGLNGVLNLSTFDGWWVEGYNGRN......GWVIGD
AT.LEPETEEDDYLDAMSLYDLLENVVIPMYYE.NREG.....WIRIMKESIKSIAPRFSTYRMLKEYMTKFYSR
>OMNI|CT1596/96-703
VAYFSAEFGIHESLRLYSGGLGILSGDHIKSASDLGLNFIGISLFYKEGYFRQYLNHDGWQIENYPLQYPESLPIEKVTT
ADGKDLIIEVIIAQ.STVFAQAWSLK.VGRATLYLLDTNIPANEMHYRDICSRVYGGDQNMRINQEILLGIGGIKLLKAL
K...VEP..AVYHMNEGHSAFLTLELLADEL.AEGRSFEEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMLYTFS.....K
YVALCGMEMEEVLRLGAEN.PADTS..GLFTMTVLALRLSRCANGVSKLHGEVSREMWKHLYATDDPKEVPIGHITNGIH
TKSWSSGFTERFWKHHAKSLD..ELFASRESAEAVLSKVSDSELWCLRYQLKRNLIDYIARYLSNQLYHQHQYATPYKPC
DSSKSAKSALSPDVLTIGFARRFATYKRAPLIFQDLDRLNAIVNH.PTMPVQIIFAGKAHPHDDAGKEYIRQIVEHSHRP
QFLGKVVFLENYNIGVAKRLVSGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTN......GWSIGS
GEQ.YENYDEQYRFDANKLYEVLENQIIPTFYE.RNEHNLPVRWLKNIRNAIATIAPVYNTDRMVKEYTMRYYLK
>GP|29338406|gb|AAO76207.1/110-712
IAYFSMEYGLDEVLKIYSGGLGMLAGDYLKEASDSNVDLCAIGLLYRYGYFDQSLSMDGQQTVNYKAQNFGQLPIEKVMQ
PDGKQLVIHVPYADSFVVHANVWKAS.VGRIPLYLLDTDNELNSEFDRPITHHLYGGDWENRLKQEILLGIGGMITLRAL
G...ITK..DVYHCNEGHAALINIQRLCDYI.NGGLNFGQAMELVRASSLYTVHTPVPAGHDYFDEGLFNKYMK.....G
YPGKLGITWDNLMDLGRHN..PGDK.EERFCMSVFACKTCQEVNGVSKLHKSVSQQMFAPIWKGYFPEENHVGYVTNGVH
LPTWCAAEWKKLFKDNFDENFF.CDQSNQKIWE.AVYGIPDEEIWNTRLKQKAKLLDYIKSKCSKDWLRTQIDPALSVSI
FERFN......PDALLIGFGRRFATYKRAHLLFTDIDRLARIVNN.PKYPVQFIFAGKAHPNDGAGQGLIKQIVEISRRP
EFLGKIIFLENYDMDLARHLISGVDIWMNTPTRLAEASGTSGEKALMNGVLNFSVLDGWWYEGYRKDA......GWALTD
KR.TYQNEQYQNQLDAEAIYYLLEHDILPLYYE.HGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNK
>OMNI|NTL01CE1987/114-719
TAYFSMEFGIHPSLPIYSGGLGVLAGDHMKSASDLGVPLIGVGLLYTHGYFTQSLTADGWQQEKYEYHDPANLPIVAVTD
DKGEQLKVTVAFPEGRQITIALWVAN.VGRVPLLLLDTNIDENPEDMRSVTDRLYGGDSEHRIKQEIVLGVGGIRAVDAY
CEQKGIPRPDVAHLNEGHAGFLTLERIRQRM.AQGMDYAAAFEQVRASNIFTTHTPVPAGIDRFDMSMVRRYLGDGLPED
QQLCPGIPLDKAIELGRE....DDP..SLFNMAHMGLRASQRANGVAKLHGEVSREMFAGLYPGYEPAEVPIGHVTNGVH
LPTWVKPEMLELIERVSGGA....DLAVADTWS.NPDAVPNEKIWEVRNKLRADLVEVARAATFESWATRGHAEAQLGWT
RRVLD......PEVLTIGFARRVSTYKRLTLMLRNPERLRSILLN.EERPVQFVIAGKAHPHDMGGKKLMQEIVQFADQA
GVRDRFLFLPDYDINLASYLVAGTDVWLNNPVRPQEASGTSGMKAVMNGGLTLSISDGWWDEMPQEET......GWTIPT
VE..TPDFEYRDHLESQALYDLLENDVAPLFYD.RDDNGIPQGWLEMIRRSWTTLSPMVTSTRMVRDYTTDYYRP
>GB|CAD84377.1_N.euro/112-712
IAYFSMEYGLGKALPLYAGGLGVLAGDYLKAASDLAVPVIAVGLLYQEGYFRQMLDTSGWQQEIYPYNDSSSLPLHPLRA
HNGTWLSIPIRLPG.RTVQLHVWEAR.VGRVSLYLLDSNNPLNSALDRGITGKLYGGGEEIRLVQEIVLGIGGWQLIEAL
A..LEI...DVCHLNEGHAAFVTLERARCFAQKRQMDFHEALWATRPGNLFTTHTPVAAGFDTFPRALMIKYG.....LP
YARNLGMPLDELMAFGRSN.GQDDD..EPFNMAYLAARTCGMMNGVSRLHGQVSRSIFQKLYPQWPECEVPVTHVTNGVH
VPSWDSPWADEIWTDSCGKGR...WLGSEETLATKIHKLDDAALWNLCGQERADLVRHARQRMRILQGQRGADTEAISQV
DRILD......PNVLTLGFARRFTAYKRPNLLLHDRERLARLLTR.TDRPVQLVVAGKAHPADNEGKRFIQEWAQFSSRP
DVRNHVVFLEDYDIALAQELVQGVDIWINTPRRPWEASGTSGMKVLANGGLNLSELDGWWAEAYTPDA......GWALGD
GR..EHHEPGWDAMEAEQLYRLLEEEIIPMFYD.RDASGIPAAWVARMRTSMAHLAPQFSSNRMVREYVEQLYLP
>OMNI|NTL01NS1270/108-712
YAYFSAEFGLVDCLPVYSGGLGVLAGDHLKSASDLGLPLVGVGLLYQQGYFAQYLNADGWQQERYPINDFYNMTLHLERN
PDGSELQIAVDYPG.RKVYARVWRVQ.VGTVPLYMLDTNIEPNNPYDHDITDQLYGGDIDMRIHQEIMLGIGGVQMLKAL
G..YKVT...AYHMNEGHAAFSALERIRLLIQEEGLSYAEAKQVVSSSNIFTTHTPVPAGIDLFSPDKILYYLG.....Y
YADIFGLPKEQFLGLGRENTG.DLS..GPFSMAVLALKMATFSNGVAQLHGVVSRQMFQGLWKKVPVEEVPIAAITNGVH
ARSCVAKSTQELYDRYLGPN..WSSAPPDNQLWERMDAIPDEELWRNHERCRLDMILYVRDHLVKHLRDRGASASEILQA
QEVLD......PNALTIGFARRFATYKRATLWMRDVERIKRILLSNKDRKVQFVIAGKAHPKDIPGKELIREINHFIREQ
HLEKQIVFVPNYDIHISRLMVAGCDIWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYVRT......GWAIGH
GEN.YDDPNYQDEVEANALYDLLEKEVVPLFYDHRDVDGLPRPWVAKMKDAIRLNCPFFNTARMVREYAQRAYFP
>OMNI|NTL01NS2801/114-722
VAYFCAEFGIHESLPIYSGGLGILAGDHLKSSSDLGVPLVGIGLLYRQGYFRQRLSRQGWQEDYYVDNSFHRMPIELIKN
EHGEPLTIKLEIRQ.RQVTVQIWRVQ.VGRVSLYLLDSDRHDNDPIDRWLTGHLYGGNTETRIAQEVVLGIGGVRALQAL
G...IKP..SVYHLNEGHAAFCTLEIARLEIERTGKSFYDIEASVRNSCVFTTHTPVPAGHDVFSPDLIDSFFA.....H
YWTQLRLSREQFLALGARR..LGDP.WEPFGMTVLALRMSRACNGVSELHGQVSRKMWTVLYPQRSEEKVPIGYITNGVH
APTWTAPLLADLYNQYLGADWR.TQAIDPKMWA.KVDDIPDEELWSRHLILKERLVAYTRYKVRKSREHRGEDQRLIQAS
DSLLD......PKILTIGFARRFSPYKRGDLILRDAERALRIFSN.AERPVQIVFAGKAHPADEEGKRIIQRLMEWCHNS
GIINRVAFIEDYDIYTGQKLVQGVDVWLNNPRRPLEASGTSGQKVCFNGGINCSVLDGWWCEGYQADANGKGLNGWAIGE
DAH.TSDQELQDRIDSQSLYKLLEEEIVPLYYD.QDANGIPHRWVQVMKASIKTNAPLFNTDRMIADYVTQVYVP
>OMNI|DR2195/107-709
VAYFSMEYAFHESLPIYSGGLGVLAGDHCKSASDLGLPFTAVGMLFSQGYFRQLFDKDGWQNEAYDELDLTTLPIQPAQS
AAGEDIRVSVRIAG.REVAVKVWTLQ.VGRVRVLLLDSNVPDNSEDDRKLTARLYGGNQELRVQQYVLLGVAGIRALRAL
D...VPA..SVYHMNEGHAALMALERMREYV.AAGQDFRTAAELAASSTLFTTHTPVAAGNDAFTYELMDKYIG.....E
WPGLLHAGRDELYALARHDQQWDGHTVPAFSMTVFALSMSRAANGVSELHGEVSRGMWNFLYPGAEENEVPIGHVTNGAH
NLTFTSQRMRDLLSTVLPEDWT.ERLEDETMWQ.AVEQLTEEQLSNVQREMKREMITFVRGRVREQLLRNGASAADVAAT
DNLLD......EGTLTIGFARRFATYKRATLLLRDKPRLAAIVNN.PERPVQFVFAGKAHPADNPGKAFIQEIYRTSQEP
EFRGKIVILENYDMNVARHLVQGVDIWLNNPRRPLEASGTSGMKASFNGSPNFSVLDGWWREGYDGTN......GWPIGE
ERE.YADLNVQDDADAFDLYQRLEHEIAPRYYG.HAQG..NASWAHTVRDAIETVSPRFSMQRQVLDYVQQYYLP
>GB|CAD83985.1_N.euro/110-711
VAYFCFEFGFHESLPVYSGGLGILAGDHCKAASDLCLPFVAVGLLYRQGYFFQTIDGQGNQQPVFCDSDFEDLPVKPALH
DDGSEVRISVRFPG.RVVTVKVWRAQ.IGHVGLYLLDTDLPDNSEYDRLITHQLYGGNKTMRIEQEIILGVGGVAALRAM
G...IKP..TIWHSNEGHAAFMMLTRALELV.RQGLDFASATEAVAVNTIFTTHTAVPAGHDHFPEDMMHRYFE.....D
FYHELKISREEFMALGHTPGNHD......FNMTALAIRMSRMHNGVSRIHRDVSANICHDMWPQIEPEENPIDYVTNGVH
VPTFLAQEWTDLFDRRLGSQWR.SKQHAPEFWS.RIHDIPDHIFWSVRQSLKSQMFYGIRARLTEQNLRNHGSEAHLERL
LRFVDPI...NPNILTLGFARRFATYKRATLLFQDLDWLRKLLLD.AARPILLIFAGKAHPADLPGQALIRHIHQVADMP
EFRGRILLVEGYDLRLARRLVSGVDVWLNNPIYPLEASGTSGMKAGINGTLNLSILDGWWGEGYDGKN......GWGIKP
VSE.NMEDSLRDAEESRAFYEILQDQVIPLYYD.HSKFGYSADWVRMAKNSMVSLLPRYGTGRMVGEYVQKFYAP
>OMNI|NTL01TT1680/9-540
VAYFCMEYGLESNFKLYAGGLGILAGDYLKAAKEMGLPVVGIGILWKQGYTEQHIGEDGYPYDAYRNYTRN...YDFLKD
TG...VKVKVKIRN.KDVYCKVWLVDSFDNAPLYLLDTDIPENG..DRWITGQLYGWFGEERVAQEIVLGIGGVRALRAL
G...IDV..DIYHFNEGHAVLAGIELIREKMENQGMSFEEAWEATRKEIVFTTHTPVKEGNESHDLELLMYMG.......
..ANNGLTIEQLAQIGGV..........PFNMTVAGLRLSKIANGVSKLHGQTANKMWQHIEN.....KAPIISITNGIH
RGTWVDKRITEAYKKGTG.........................LLETHNLLKKELIDFVYKKTGVK..............
...LD......ADKLLIGFSRRAAPYKRSDLIFTNEKAIGEYLRD...RKIQIVFSGKGHPLDDVGKEIVARIVKMTKK.
.YPESVVFLEDYDMTIGKMLTRGADVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWPEACIDGVN.....GWQFGD
GFESD.NFEELDKHDAEALYDVLLNKVVPTYYN.DKKK.....WEEMMKESIRTTFEAFSANRMLQEYYDLMYTK
>GP|27262502|gb|AAN87532.1/48-578
VAYFCMEYGLHEELPIYAGGLGVLAGDYLKAAHDSGLPMVAIGILWNQDYTHQFIGEQGRPYDTYPNIR.....FDSVKD
TG...VTVQVRVRG.ADVVCKVHKVDSYGNVPLYLLDTNFPGSE..HGWMTNRLYGGSGQDRVAAEIILGIGGIRALRAL
G...IEV..DLYHLNEGHATFCGFELIREKMTHYGMTFHQAWEDVRKELIFTTHTPVEAGNEVHGHDLLRLME.......
..AYNGLTYEQVKDIGGD..........PFNMTVAALRLSHIANGVSKLHGQTACKMWSDVHN.....AACIISVTNGVH
NRTWQDHSISDAFEHKGD.........................LWEAHLNNKYRLVDYIERHRNVR..............
...LN......PDNLIVGFARRAAPYKRSDLIFRTAEVIEPLLQE...RKLQLVFSGKAHPNDGIGKDIIQQLVRMSEK.
.YGNSVVFLENYNMEVARYMVRGCDVWLNNPRRPLEASGTSGMKAAMNGVLNLSTVDGWVGEGLQHQVS.....GWLINP
DIEAHLQEWEQDERDLRELYRVLLNEVIPTYYN.NRNY.....WIQMMRASIDMARWQFSSHRMIREYFDLMYEL
>SP|O66932|PHSG_A.aeol/92-686
IVFLSPEYGLHHTLLIYAGGLGFLAGDILKESSDLGFPLIGVGFMYPQGYVKQRIRVDGWQEDLDAQNQKELMPVKKVLD
KEGKWLKCYVYVRD.EKVYFGVWEVN.VGKTKLYLLDTNVEENTPWNREISSRLYVPDKDLRLRQQIVLGFGTVILLEKL
G...IDA..GGFHINEDYPSFVFLAEIFKLL.KKGLTWDKAIEEVRKISLFTTHTPLRVAVNTYPFHMIEEQFL.....F
VKDVYGIDVKKVLELGTNP..E.DP.SEGFNSTIMSLRLAKYVNAVSKRHQEVSSKMWSFLFK...EKENPIDYVTNGVH
FPTWICSDLRRLYEEYLGENFV.ELHDHKSLWE.LIRDIPDEELWEYHIRNKERLIEHIKDRARERWVKEKADPSILMAE
GLFLD......SDVLTVGFARRMTGYKRPDLIFTDVERLKKIVND.SERPVQIIFAGKAHPADIEGKKIIQRIFNFAKDP
EFGGRIAFVEDYDELLAHYMVRGVDVWLNNPLPPLEACGTSGMKASMNGVLHLSILDGWWIEGYNGKN......GWAFGD
YE.VEGD.R..NRADAEAIYNILENEVIPLYYE.RDERGVPVKWISMMKEAIKSITPNFCSRRMLKDYINKFYSK