HMM Seed Alignment: TIGR02392

Download Alignment

>AFE0356/15-281
DGLAGYLRFVNAQPLLRPEEERDLARRLRDHGDVDAAKDLVLSHLRFVVRVARGYRGYGLQEADLIQEGNIGLMKAVKRY
DPDHGVRLVSFAVHWVKAEIHEFILRNWRIVKVATTKAQRKLFFNLRSSRS...HT...GWMSGEESAAMADDLGVTQAQ
VLEMEGRMSGYDYSLNLEPDEEREG.....GRAPDLADP.TGSPIEQLVERDWDQQQHRALHTALSALPQRDRYIIENRW
LS..DD...PKTLQVLGDELGVSAERVRQLEKSSMGKLRQQMLT
>OMNI|BMA3138/1-273
GNIDAYIQAVNRIPLLSAEEERQYATEYREQNNLDAARRLVLSHLRLVVSVARNYLGYGLPHGDLIQEGNIGLMKAVKRF
DPAQNVRLVSYAIHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLRSHKK...GTQ..A.FTPEEIDGLAQELNVKREE
VAEMETRLSGGDIALEGQIDDGEES....YAPIAYLADS.HNEPTAVLAARQRDMLQTDGIARALESLDARSRRIIEARW
LNVDDDGSGGSTLHDLAAEFGVSAERIRQIEASAMKKMRTALAA
>GB|CAE35198.1|33577933/38-306
GTIDAYISAVNRLPILTAEQEGQLARRLRDEGDLEAARELVVSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRF
DPERGVRLVSFAVHWIKAEIHEFIIRNWRLVKVATTKAQRKLFFNLRSMRP...DGQ..T.LDPEQVDHIARELNVRRED
VSEMEVRLSGRDLSLESQDDD.DDS....FAPIAYLSDEGRQEPSRVLDRMAHDDLQGAGLGRALEALDARSRRIIEARW
LQ..DD..GGLTLHELAQEFGVSAERVRQIEAAALKKMRGALTP
>PIR|G81166|G81166/18-285
GSLEQYIHTVNRIPMLTQEEETRLAER.QHKGDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRY
EPGRGARLFSFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRK...NLN..A.LSPKEAQDIADDLGVKLSE
VLEMEQRMTGHDIAIMADNSDDEDS....FAPIDWLADH.DSEPSRQLSKQAHYALQTEGLQNALAQLDDRSRRIVESRW
LQ..DD..GGLTLHQLAAEYGVSAERIRQIEAKAMQKLRGFLTE
>GB|CAD84495.1|30180193/13-280
GDLDSYIRATSSFPVLSREEEASLAKRMREEGDVNAAHQLVLSHLRVVVTIARGYLGYGLPHADLIQEGNIGLMKAVRRF
DPERGVRLISFAIHWIRAEIHEFIMRNWRLVKIATTKQQRKLFFNLRSMKK...GLD..T.MSQAEVASMAEQLGVKAEE
VVEMETRFSGRDISLEPVTDSDEDD....FSPIAWLTDG..SDPSRELEKEQLERLTHARLKNSLDSLDERSRRIIEARW
LR..ED..KAATLHELADELGVSAERVRQIEAKAMKKMRAEIAI
>GB|AAF26609.1|6716381|AF120928/16-287
GSIGSYISWVNRIPLLSAEEEHDLANKFRQSNDLEAARKLVLSHLRFVVRIARGYSGYGLSQADLIQEGNIGLMKAVKRF
DPQVGVRLVSFAVHWIRAEIHEFILKNWRIVKIATTKAQRKLFFNLRKHAK...KR...GWFSDHEAFALAEELNVSTKD
VRQMEERLNSYDEAFDGADEESDSGTPSWGAPAHYLEDK.RYNPALQLERSNWADDQEHRLHNAMQSMDDRSRDILYQRW
LS..EK...KSTLHELAAQYAVSAERIRQLEKNAMQKIRTAMAD
>MCA0136/14-284
GSIDDYFAAVNRLPRLDADEERELAIRFRDEQDLEAARRLVLANLRFVAYIARGYLGYGLPLADLIQEGNIGLMKAVKRY
DPDVGVRLVSFAVHWIRAEIHEFIIQNWRIVKIATTKAQRKLFFNLRKMKN...RL...GWLTPEEAAAVAAELGVDVED
VYKMENRLNNPDMALEAHGEDDGDDRESH.APIHYLQQE.GGDPALLIEHSEWENRQQEKLQEAIGQLDERSRDIVASRW
LS..ED...KLTLHDLAARYNVSAERIRQLESSAMKKLRNALAD
>GB|AAM38666.1|21110222/21-291
GSLDAYIGAVHQIPVLSVDEEQDLARRFRDELDLDAARELVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRF
DPDMGVRLVSFAVHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKT...RL...GWLNASEVTAVAKDLNVSERE
VMEMESRLSGRDIGFDASSDEDDDHGPP..SPVSYLVAN.EEDPSQAYERHDSEDNQLQLLREGMAGLDARSRDIVKRRW
LD.SDS...KVTLQELADEYGVSAERIRQIEANALKKMKALFVA
>SP|P44404|RP32_HAEIN/13-281
GSIEGYIRAANEYPMLTAEEEKELAERLYYHEDLDAAKKLILSHLRFVIHVARGYSGYGLPQADLIQEGNIGLMKAVKRF
NPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQ...RL...GWFNENEVDMVANELGVSKED
VIEMESRMSGADVGFDLPTDDAETETYS...PALYLEDK.SSNFAAELENENFESQATEQLGAALQSLDARSQDIIKARW
LD..DN...KATLHDLAAKYNVSAERIRQLETNALKKLKSAVNF
>GB|AAN57543.1|24351072/17-285
SSLEAYIHSVTSMNMLDAETEYELAKRLQETGDLQAAKQLIMSHLRFVVHVAKGYAGYGLPQADLIQEGNIGLMKAVKRF
DPDVGVRLVSFAVHWIKAEIHEYVLKNWRIVKVATTKAQRKLFFNIRKAKT...RL...GWFSDDEVTMVAENLGVSKAD
VTEMESRMAAQDPAFDLSSDNDD...EHDFAPVHYLEDH.SSDLAENIENDNWESNAQGRLLSAIKTLDERSQHILRARW
LD..DD...KTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
>SP|O05385|RP32_BUCAI/14-284
GNLDAYIRIANLWPMLSIEEEKKLTKRLRYNGDLDAAKTLILSHLRFVIHISRNYSGYGLLQSDLIQEGNIGLMKAVRRF
NPEIGVRLVSFAVHWIKSEIHEYVLRNWRIVKVATTKSQRKLFFNLRKTKK...RL...GWFNEEEIQIVARELGVSSRD
VREMESRMSAQDVAFNPSPEEHC.DSKT.NSSIQYLQDK.TSNFANGVEQDNWEEHAANKLSSALLRLDERSRHIIHARW
LD.KNK...KNTLQNIANNYGISAERVRQLEKNAMKKLKLAIEA
>GB|BAC24218.1|25166027/13-281
SSLESYIKKANSYSMLSIEEEKILTERLHYNGDLLAAKKLILSHLRFVVHISRNYSGYGLQRADLIQEGNVGLMKAVKRF
NPAIGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKK...KL...GWFNQYEVDMLAKSLGVTSKD
VREMESRMSAKDMAFDFNSEE...DKHK.NNAILYLKDK.TSDFADTIEEDNWDIHATDKLSAALSNLDLRSQEIIRSRW
LR.YDN...KSTLKELAKKYGISAERIRQLEKNAMKKIRFAVES
>GB|CAD83301.1|33504408/15-283
GTLEAYIRAANLYPMLTVEEEQKLAKNLYYNGDLNAAKKLIVSHLRFVIHVARNYSGYGLSQADLIQEGNIGLMKSIRRF
NPELDVRLVSFAVHWIKSEIHEYVLKNWRIVKIATTKAQRKLFFNLRKTKQ...RL...GWFNEGEIEMVAKTLHVTCKD
VREMESRMAAQDMTLEQPYLDEDDKNIL.SIPMLYLQDK.ITIIDD...EEEWIDQVSNKLNIALNTLDKRSQHIIRARW
LN.ADN...KTTLQELANQYGISAERIRQLEKNAMKKMKLILNN
>GB|AAN30552.1|23348506/14-286
GGLTRYLEEIRRFPMLEPQEEYMLAKRYHEHADPKAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRF
EPERGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKMKSKIQALDD.GDLNPDQVKQIATKLNVSEDE
VVSMNRRLSG.DASLNAPLRASEGESG...EWQDWLVDDSN.SQEQVLIEQDELESRRSMLEQAMETLNDRERRIFEARR
LA..EE...PMTLEDLSGEFGISRERVRQIEVRAFEKVQAAVKA
>GB|AAC44755.1|1613784|BJU55047/14-285
AGLSKYLVEIRKFPLLTPEQELAYARRWREHRDRDAAYHLVTSHLRLVAKIAMRYRGYGLPIAEIVSEGNIGLMQAVRRF
DPDRGVRLATYAMWWIRASIQEYILRSWSLVKIAASASQKKLFFKLRRAKSAISALQD.GDLRPEQVRLIAERLKVAERD
VVAMDRRLRG.DASLNVPIHD.EDEGG...QTLDWLVDPAP.TCEITLAEEQEAKQRRLALANALANLNARERNIFTARW
LN..EE...STTLEELAAEYGVSRERVRQIEERAFQKVKAAMLT
>PIR|G97750|G97750/14-287
SGFYSYLQKINKIPSLTQEEELLLAKSYLEGNDLQAAHKLVTSHLKLVAKIASGYRTYGLPITELVSEGNIGLMQAVKKF
NPELGFRLSTYAMWWIKAAIQEYILKSWSLVKMGTTAAQKKLFFSLNKVKHKITNLYS.RAITTDDFVQIADELGVSVNE
VSEMNTRISGPDLSLNNSINSDDAESG...ELIELLPETRP.TPEAMAINKQNSTSKRQLLSNAMKILNDRELRILTERK
LT..DT...PKTLDILSNEYNISKERIRQIENTAFEKIKKFILN
>GB|CAA70861.1|1834377|BJY09666/23-294
PFLSAYSAAIRRYELLEPGQEQQLARRWHETRDRGAADALVTSHLRLAAKLARGYKGYGLPMVDLIAEANLGLVIAASRF
EPGRGARFSTYAIWWIKAAIHEYILRSWSLVKIGTTAAQKKLFFKLRSEIRKATGSVM.SGLTPDVAELIAGKLDVTARE
VIEMDARLNG.DMSLNARVGG.EESGT...ELEALLVDGAV.DAETMLADHEQTERRAKALRVALGGLAARERHVFEARR
LT..EC...PVTLDQLARELSISSERVRQIEIRAFAKVKRAVML
>GB|AAR33985.1|39982525/10-276
DSLTVYLREIRKFPVLTPEEEYRFAVKFYEDKDLEAAHSLITSNLRFVVKIAAEYRSYGLKMLDLIQEGNVGLMMAVRKF
NPYKGIRLISYAVWWIRAYIQNHIISAWSLLKIGTTQAQKKLFFKLNQAKN...AIKGLTGTDD..IEATATSLHVKESE
VLEMDQRMRG.DFYLDAEIKNG..DGL...TILETLADER.QNQEDTLAELQESELLKQHIAGALGKLNEKERFIVEQRV
TA..DT...PLTLQEIADRFSISRERVRQIEEAALRKIKSYLIP