HMM Seed Alignment: TIGR02393
Download Alignment>SP|P52323|RPOD_BORBU/391-628
AKDQLIKANLRLVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWWIRQAITRSISDQARTIRVPV
HMIEQINRLNRETRYLIQVLGKDPTDEELSDRLG............WELKKVKTVKSVSREPVSLETPIGE..EEDSVLS
DFIEDKAIKNPANHTSFVVLQDQIRAILG.TLPEREQEVVKMRFGLEDG......YSLTLEEVGLHFNVTRERIRQIESK
ALRRLK.NPKKTQKLK.DYLE
>SP|P59117|RPOD_LEPIN/347-584
AKKELVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFSTYATWWIRQAITRAISDQARTIRVPV
HMIEQVNKVIRETRLFIQEFGRDPNNEEIAERLG............WPVQKVKMVKNVAREPISLEIPVGS..EEDSELG
DFIPDTEVETPVNAAASSILAEQIRQVLH.TLPAREQKVIRMRFGLDDG......YPQTLEEVGYQFKVTRERIRQIEAK
ALRRLR.HPSRSKKLK.DYID
>OMNI|DR0916/120-360
ARQGLIEANLRLVVSIAKKYTGRGLGFLDLIQEGNQGLIRAVEKFEYRRRYKFSTYATWWIRQAINRAIADQARTIRIPV
HMVETINKLTRTARQLQQELSREATHEEIAEAMGP..........GWDAAKVEEVQKVSQEPVSLETPIGD..EKDSFYG
DFIPDENLDSPVDNAAKTLLSEELEKALG.KLTEREAMVLKFRKGLVDG......REHTLEEVGQRFSVTRERIRQIENK
ALRKLKYHESRTRKLR.DFLD
>GB|AAS43273.1|42739347/138-375
AKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPV
HMVETINKLIRVQRQLLQDLGREPSPEEIGEEMD............LAPEKVREILKIAQEPVSLETPIGE..EDDSHLG
DFIEDQEATSPADHAAYELLKEQLEDVLD.TLTDREENVLRLRFGLDDG......RTRTLEEVGKVFGVTRERIRQIEAK
ALRKLR.HPSRSKRLK.DFLE
>SP|P43766|RPOD_HAEIN/391-628
AKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPV
HMIETINKLNRISRQLLQEMGREATPEELAERMG............MPEDKIRKVLKIAKEPISMETPIGD..DDDSHLG
DFIEDSTLELPLDSATAQSLKVATHEVLE.GLTPREAKVLRMRFGIDMN......TDHTLEEVGKQFDVTRERIRQIEAK
ALRKLR.HPSRSETLR.SFLD
>SP|Q9Z7F0|RPOD_CHLPN/317-554
AKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPV
HMIETINKVLRGAKKLMMETGKEPTPEELAEELG............LTPDRVREIYKIAQHPISLQAEVGE..GSESSFG
DFLEDTAVESPAEATGYSMLKDKMKEVLK.TLTDRERFVLIHRFGLLDG......KPKTLEEVGSAFNVTRERIRQIEAK
ALRKMR.HPIRSKQLR.AFLD
>GB|AAL95514.1|19714957/93-330
ASKKLIESNLRLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITRAIADQGRTIRIPV
HMIETINKIKKESRIYLQETGKDASPEILAERLG............MEVDKIKAIQEMNQEPISLETPVGS..EEDSELG
DFVEDQKTTSPYEATNRAILREELDAVLK.TLSPREEKVLRYRYGLDDS......SPKTLEEVGKIFNVTRERIRQIEVK
ALRKLR.HPSRKKKLE.DFKV
>GTN1638/148-385
AKEKLITSNLRLVVSIAKRYMGRGLSFQDLIQEGNIGLLKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMVETINKLNRLRREYYQKYGEEPSVEELAKMMG............KPPEKIKEILEAAKETISLESPIGE..DEDSSIE
DFVADESVPSPKKEAMRMLMREELEKVLK.TLSPREAMVLRMRYGLLDG......KPKTLEEVGQYFNVTRERIRQIEVK
ALRKLR.HPSRSKYLK.SLLS
>PIR|F70429|F70429/338-575
AKQVMIQSNLRLVVSIAKKYVNRGLHFLDLIQEGNIGLMKAVDKYDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMIETINKIIKASKKLFQENGREPTPEEIAEYLD............IPVEKVKKVMKFSQEPISLETPIGD..DDDTFLK
DFIEDKSIPNPEEQVTRKLLREQLQKVLS.TLSEKEREILMYRYGLVDG......TEYTLEQVGKMFNVTRERIRQIENK
ALRKLR.HPARAKYLK.DFEF
>OMNI|NTL01TE0616|BAC08169.1/182-418
AKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPV
HLYETISRIKKTTKLLSQEMGRKPTEEEIADRME............MTIEKLRFIAKSAQLPISLETPIGK..EEDSRLG
DFIES.DGETPEDQVSKHLLREDLETVLC.TLSPRERDVLKLRYGLDDG......RMKTLEEIGQLFNVTRERIRQIEAK
ALRKLR.HPNRNSVLK.EYIR
>GB|BAD04713.1|39722223/217-457
AKDILVESNYRLVVSIAKRYIGRGILFLDLIQEGNMGLMRAVDKFDYQKGFKFSTYATWWIRQAITRAIADQARTIRIPV
HIVETINKMALCTRKLTQKLKKKPTVEELADKMN............ISAEKIRSIQYIEKKPISLEAPARENEEDETSLG
DFISDPNILSPHEYMMKEVTQKLLDEVLENTLTDREEKVLKMRYGLLDG......KTHTLEEVGTLFGVTRERIRQIESK
ALRRLR.TPAKQSKLK.SLYH
>GB|AAP77142.1|32262093/384-622
AKAKMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKKGFKFSTYATWWIRQAISRAIADQARTIRIPI
HMIETINRIHKIMRKHVQETGKEPDIDFIAKEVG............LPIDKVKNVIKITKEPVSLDAPIGS..DDDGKFG
DFVEDKSSVGPMDYILKEDLKVQIDEVLE.QLNDREKAVIRMRFGLLDDE.....SDRTLEEIGKELNVTRERVRQIESS
AIKKLK.HPKVGRKLK.NYIE
>SP|P47491|RPOD_MYCGE/246-491
AINQLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAISKFNWSLGNKFSTYATWWIKQAITRAIADQARTVRIPV
HMVETINRLAKAERALYQELGREPTDEELAEKMG..GQAEG.....FNVKKIAEIKRLSLDPVSLDKTVGH..DEESQFG
DFVKDTDAQTPDEFTESRSNSEKIDELLNNNLSEQEELIVRMRIGMPPYN.....EPKTLDEVGQKILIPREKIRQIENK
AIRKLR.HAVRNNPISMSFLR
>GB|AAP56739.1|31541438/395-639
AINQLVTSNLRLVTSIAKKYLNRGLDFVDLIQEGSIGLMKAISKFNYKLGNKFSTYATWWIRQAITRAIADQARTVRIPV
HMVETINKLIKTERMLTQQLGRDPTLEELTEAMG..GQVNG.....FTPKKVADIKKLNQEPVSLDKPIGH..DEESQFV
DFVKDRDILKPDEYTEKLIVTEHINELFINTLTKKEEQIIRMRYGLHPWH.....QQMTLEEVGQKFNVTRERIRQIESK
ALRKLK.HPSKNARLR.SFLK
>PIR|E82901|E82901/193-444
GKNQLYTSNMRLVTSIAKKYLNRGLDLEDLIQEGSSGLLKAIDKFDHEKGHKFSTYATWWIRQSITRAIADQARQIRIPV
HMVETINKLTKAERNLIQELGRDPTAEEIAQAMNKVSQAKNQKEQLITAQKVVEIKKLNVDPVSLDKQIGH..DEESQFS
DFISDDEIISPEKYTEKKALNDQINEMFEKVLNDNEQRVIKMRYGLLPFE.....RPYTLEEVGEYLGVTRERARQIESK
AIRKLK.HPSKTAKLR.SFIG
>NT02CA2883/159-396
ARQQMAAANLRLVVSIAKRYRDRGLPLLDLIQEGSLGLLRAIEKFDYTKGYKFSTYATWWIKQALSRALADQSRLVRLPV
HLGETLNRIQSARRQLTQSLGREPTDTELANHLG............MSEEKLRELRRTAQDPVSLATPVGE..EADSTLA
DFIPDPHALDADDAAASGMLRQQITAALD.QLSERERRVLELRYGLVDG......QPRTLEEVGKAFGVTRERVRQIEVK
ALRKLR.HPRLGKLLK.DYLD
>PIR|F90568|F90568/214-460
AKDKLINRNLRLVINNAKKYKNRGLSFIDLISEGNAGIIKAVQKFDESKGFKFSTYATWWIRQSITRAVADQARTIRIPV
HMVETINKIIKIERELQQELGVNPTDEQIAERYG..........NDYDAKKVRYIRKMNIDPISLDKTVGK..ENDSFFS
DFVKDESVISPIDHAAKEDLNEHLLELLNEQLTEEERVLIMKRYGIGEDENGVPYQVHTFDQLATEKNTSKEKIRQWENK
ILRRLK.ATKKRKILK.EYLV