HMM Seed Alignment: TIGR02776

Download Alignment

>GB|AAG05526.1|9948155|AE004641/228-824
PPRG.E........WAYELKLDGYRLMSRIE.DGHVRLLTRNGHDWTERLP.HLEKALA.....GLGLQRSWLDGELVVL
DEEGRPDFQALQN.........AFEEGRGENILYVLFDLPYHEGEDLRDVALEERRARLEALLEGRDED.....PLRFSA
T...LAEDPR..DLLASACKLGLEGVIGKRLGSAYRSR.RSNDWIKLKCQLRQEFVIVGYTEPKGSRRHIGALLLGLYSP
DEERRLRYAGKVGSGFTAASLKKVRERLEPLAVRSSPLAK.VPPARETGSVQWVRPQQLCEVSYAQMTRGGIIRQAVFHG
LREDKPAREVTGERP.........AGPPPLRGARKA........SAGASR.............AATAGVRISHPQRLIDP
S....IQASKLELAEFHARYADLLLRDLRERPVSLVRGPDGIGGE....LFFQKHAARLKIPGIVQLDP..ALDPGHPPL
LQIRSAEALVGAVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQLSLTLLDELGLRAFLKTSGGKGMH
LLVPLER....RHGWDEVKDFAQAISQHLARLMPERFSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLPVSVP
VFREELDS..LQGANQWNLRSLPQRLDELAGDDPWADYAG
>GB|AAN68867.1|24984896/228-817
PPSG.D........WRYEVKFDGYRILARIE.GQDIRLFTRNGHDWSSKMP.RQVAALR.....ALGIDSAWLDGEMVVA
DENGMADFQALQN.........AFDTEHDERITYYLFDLPFLGGQDLRQLPLQNRRNTLRQLLEHNHCD.....VIKYSA
D...FDEPVQ..SLLDSACRLKLEGLIGKRVDSVYSGR.RSPDWIKLKCKQRQEFVIVGYTDPKGSRSGFGALLLALHD.
NDSGQLRYAGKVGTGFNATTLASIHARLKPLEIARPALPS.PPAGAEARGVHWLRPQLLAEVAFAQMTRDGIVRHSVFHG
LRDDKAATAIDLER..........AMPAKTVSNRNK........QAKAS..............ENLGELRLTHPDRVIDP
T....TGVTKREVAEYYAGISQWILPQLKHRPVALVRAPDGLGGE....LFFQKNAGQLYIPNVLSYEK..AEAG..QAA
MVINRADTLLGAVQMNMLELHTWNATDKDFDKPDRFVLDLDPDPALPWKAMVEATQLTLTLLDELGLKVFLKTSGGKGIH
VVVPLTR....RAGWDEVKDFSHAIVNYLAKLFPERLSAVSGPKNRVGRIFIDYLRNGKGATTACAYSLRARDGLPVSVP
IWREELAQ..IKAANQWNITNLHEHLAEVD..DPWADMGK
>GB|AAY38277.1|63257181/248-849
PPAG.D........WLYEIKFDGYRMLTRIQ.GDDVRLFTRNGHDWTERLP.ELVKALK.....GMKLRDSWFDGEVVVL
DEQGLPDFQGLQN.........AFDAGNSKDILYYLFDMPFLSAEDLREVPLEQRRDALKQVLDAQKSR.....LLRYSD
A...FQAGHQ..DIVASAAAMGLEGVIGKRAGSAYVSK.RNADWIKLKCRLRQEFVVVGYTAPQGSRSAFGALLLAVNAG
EDG..LIYAGRVGTGFTEVSLEQLHKQLKKLQRKDSPLAK.KLSASQARGVQWVAPQLVCEAEFAQWTREGIVRQAAFVG
LRSDKPAKDVVREDAQPAKVA...SQPPTTTAAPKA........RKKAAQG...........KVDVAGTGISHPDRVIDS
K....SGTSKIELAQFYQSIADWILPYLNKRPVALLRCPEGIDGE....QFFQKHAEHLAIPHIRQLDR..ALDPGHAAL
MEIDSVPALVGAAQMGAIELHTWGATRDRIETPDHFVLDLDPDPALPWRSMIEATQMVLAVLEELGLEAFLKTSGGKGMH
IIVPLAR....QADWDTVKAFAKAIAEFASRQLPERFTATMGPKNRVGKIFIDYLRNSRGGSTVTAYSVRARPGLPVSVP
IALDELAG..LKSSAQWDITNLEQRLKRLK.DDPWAGYSN
>GB|CAI09926.1|56315281/123-711
.......................................TDNGQDWTHRMP.QLVTALA.....ALQLDDSWLDGEIVVN
GDDGLPDFQALQN.........AFAQGASGRIVYYLFDAPWLSGDELAALPLVERKHRLAAALAGGEGG.....ASVYSE
H...FAGDVG..AALEQACHLGLEGLIGKRGDARYGSG.RSCSWIKLKCRPRQEFVIGGYTEPGGAREGFGALLVGLYD.
.DAGALNYAGKVGTGFDRETLERLARQLAALERKDSPFAR.KPRGAG...QHWVRPALVAEVEYAGWTRDNLLRQAAFAG
LREDKPANTVQDEIPLSPQVAAEMEQPPSQAKSPRRQKKKPSTERGGPAKPRA....SSESGEVRVAGIVITHPERVVWP
D....AGLTKADLARYYEDIAPWLLPHVASRPLSLLRCPDGSEAE....CFFQRHMGQERPDGVESFIWE.ASSKDRRSY
LYVTSLEGVIGMVQRGVVEFHTWGSTMPRADRPDRITIDLDPGPELAWARVVEAAQLVRGLLGELGIASFVKTTGGKGLH
VVVPLRR....GPQWADVKRFAKAVATHLARILPDRFTANMARNQRAGRIFVDYLRNDAGASAICAYAARARPGAPVSTP
LAWDELGP.ELKPGAFTVLTVADRLARLRE..DPWRDYAK
>GB|CAE33337.1|33576258/212-804
PPHGPG........WSYEVKYDGYRILAACS.AGGVRLVSRGNEDWQARMA.PLARALG.....ALKLGRGWLDGEVVVL
DERGVADFQLLQN.........ALDGQAEG.LVFVAFDLPFWNGEDLRALPLQARQERLEDLLREVPED.....APLMLT
QRLPVADDTEGKAAWNEACRLSLEGLICKRLDAPYRSG.RSQGWLKLKCRPRQEFVIGGYTEPAGARRHLGALLVGLRQ.
.GR.QLRYAGRVGTGFGAATLRTLGQRLAALRQDAKPFSGDVPRGRGDAAIHWVSPELVAEVNYAGITRDGLLRQASFAG
LRADKPASEVRGEVAARP........PAAKAATPSR........RAG.............DGRAEVAGVRISHPDRLAYR
E....PDYTKLQLAEYYAAIGPHILPHLRQRRVALLRCPDGAGTT....CFFQKHLSQSLPAGVR.........RDG.GH
LVIESLPGLIALVQYGAIEFHTWGADTRHPDTPDRITLDLDPGPGVAWPAIVEGAQMARLLMQEVGLEPFLKTTGGKGLH
LVAPLRP....TQPWDTVKDFARALARQLAVALPDRFTANMAKARRERRIFVDYLRNGNGATAVAAFSARARDGAPVSMP
LSWDALDAGDDLRGARWNIANALEQARRKP..DPWADYAA
>OMNI|NTL01SMB01392||16265140/1-584
PPEAEKDSKKP.ERWLHEIKFDGYRTMAHVA.DGKVRLVTRGGLDWTKRYG.DLPEVFR.....RLPCRDVIIDGEIVVL
DETGVSRFALLQD.........ALSTGAGNSLVFYAFDLLHLNGWNLFDVPLEKRKALLKQLLAGQVS..SRS.AIQFSD
H...VLGEGR..ALYDRASEMGLEGIVSKRISAPYRSG.RSKTWTKTKALKAEDFVIVGYTVSEAAEG.IASLALGEWA.
..DGELEYRGKVGTGFDAQMLKELLARLEPLRAGAAKLEG..APREII....WVRPLLRAHIHYGNRTTDNVLRHAVFKG
LR......DVELSTP..............VSMSRKR.......................LISDADLAGISITNPTRRLFG
K....SGPTKLDLAVYYAMIGDFMLPHILGRPVSLVRCPTGRTQD....CFFQRHPFTGMPPSVATFQATNS.EGEAKTY
LSVEDARGYLALAQFGVVEFHNWGTTRKLLGKPDRVVFDLDPGEGIAWREVVEAAIHIKAELEALALVPFVKTSGGRGVH
VVVPVVP....KLDWKKFHQATSALATRLAATAPATFTTTMGKDNRIRRIFIDFHRNARSHTWAAPYSLRARTNLPASTP
LSWADLETIDAPADLNY..SSLPGLLATSG..DPWADIDD
>GB|BAB49297.1|14022688/234-821
PPGGEGPAENTNELWLHEIKFDGYRTMAHLS.DGQVRLITRGGIDWTKRYG.DLPHAFA.....KLPCREAIIDGEIVVL
DAKGISRFALLQD.........ALAEGAGSKLHFYAFDLLHLDGWDLLKAPLIRRKALLAELLGG.LG..ANS.AIQFSD
H...VEGSGQ..GLYDQATELGLEGVISKRASAIYQSG.RTKSWTKCKALQKDDFVIAGYTISDAAEG.LAALGMAEWE.
..EGELHYRGKVGTGFDAATAADLLARLEPLTSGATAPEG..VPREIMREMHWVKPLFSARIHYANRTADNALRHGVFRG
LR......DVGLSTP..............VSAKRKR.......................LISEADLATIWVTNPERRLFG
K....TGPTKLDIAVYYALVGDFMLPHILGRPVSLVRCPTGLPKD....CFFQRHAFTGMPPSVVTFQATNS.EGETKSY
LSVEGAKGYLALAQFGVVEFHTWGTHRTSLDKPDQIVFDLDPGAGISWREVVEAAVHIKGELEGLGLVPFAKTSGGSGIH
ITVPVTS....KQNWKKLHQATSAISTHLAATAPDTFTTTMGKENRKKRIFIDYHRNARGHTSAAPYSLRARTNLPASTP
VSWSDLEAIDAPQDLNY..SSLPGLLETSG..DPWADIED
>GB|BAC52038.1|27355053/273-875
PPAGDG........WCHEIKFDGYRVQLRIE.DGKATLKTRKGLDWTDKFA.SIAKEAN.....SLP..EAMIDGEIVAL
DHNGAPNFSSLQA.........ALSDGKTEDLIFFAFDLLFAEGRDYRRLPLRERKSRLKELLEAQK..RKSN.QIRYVE
H...FESGGD..AVLQSACKLELEGVVSKKLDAPYRSG.RTESWTKAKCRAGHEVVIGGWKTTN..GK.FRSLMAGVHR.
..GDHLVFVGMVGTGFGADTVKRIMPSLKAMEAKDSPFSG.KNAPKKTRDVHWLKPELVAEIEFAGFTADGNIRQAAFKG
LRQDKPAEEVEAETPADT......ELARPSAGKRVP.......AKSGK.........KKDAGAAEVMGVVISKPDKELWP
DGGDGEGVTKLDLARYFEAVGGWMIEHLKGRPCSILRAPDGIGGE....TFFQRHAMQGTSNLLELAKVS....GDRKPY
LQIDRVEGLAAVAQIGGLELHPWNCAPDAYDTPGRLVFDLDPAPDVGFADVVEAAKQMRQRLTDVGMESFCKTTGGKGLH
VVVPLLHGARDKVSWKEAKAFAQGICRWMADDEPERYLLNMSKKLRNGKIFLDYLRNDRLATAVAPLSPRARDGATVSMP
VTWAQVKGDLDPKRYTV..RTVPGLLARS...KAWEGYDD
>GB|CAE29091.1|39650568/284-897
PPGGEG........WGHEIKFDGYRMQLRVE.HGEARLLTRKGLDWTAKFG.AIADEAA.....SLP..DAIIDTEVVAL
DSHGQPDFASLQA.........ALSDGHTENLICFAFDLLYVDGEDLRGLPLAERKARLAALLKAARGRRKEG.LIRYVE
H...FDTGGD..AILQSACKLSLEGIVSKKLDAAYRSG.RSDGWTKAKCRAGHEVVIGGWKTTN..GK.FRSLLVGVHR.
..GDDLAYVGIVGTGFGQDVVKRILPELKAHKADTSPFSG.ANAPKKTREVHWVTPDLVAEIEFAGFTGAGMVRQASFKG
LRADKPAEEVEAEEPQRV......ELAEPAPMRRIAK.....ASKSGKPAAKRAAPRRADAARSEVMGVAISKPDKELWP
ASEIGAAITKRDLADYFAEVGDWLIPHIKGRPCSILRAPDGIDGE....HFFQRHAMPGMSNLIGLAKVS....GDRKPY
VQIDRVEGLIAAAQIGGVELHPWNCAPNRYDVPGRLVFDLDPAPEVGFDEVITAAKEMKQRLEALGLKTFCKTTGGKGLH
VVVPLKP..DDGIDWKAAKTFAQTVCAQMAEDSPEQYLLNMSKRKRIGKIFLDYLRNDRMSTAVAVLSPRARTGATVSMP
LTWSQVKAGLDPKRYTI..ESVPALIKRS...KAWTDYDD
>GB|BAB51222.1|14024619/233-821
APPGKD........WLHEVKFDGYRMQAHIA.GTDVRLLTRTGLDWTEKFGGEIIAELA.....GLKCSDAIIDGEIVVL
ADSGVSSFALLQQ.........DLSAKRANRFLYYVFDLMRLDGKDLRAEPLVERKQALQELLGKQA...ENP.AVRFSD
H...FFEPGK..IMLEHACRMGLEGVVSKRADAPYRSG.RGPTWVKSKCTARQEFVIGGYLPSDKTGRGLRSLLVGYYE.
..GGKLQYAGRVGTGFSVKGATELKTRLDALQAKASPFD...KAVPKGKGLVWVKPELVGEVEFRSWTSDRIVRHASFQG
LREDKPAEDVVQEKP............KAATGKAKP.....................ASSGAGTMTTSVKLSHPDKLLWP
D....EKISKQGLLDHYAEVWPRMEQFVVNRPLSLVRAPDGIGGP....RFFQKHASAGMSDRIARMKDP....TDGEEI
LFVRDFDGVAALVQYGVVEIHIWGCTIDKLEQPDQIIFDLDPDEGVDVKAVREAALDIRGKLDELSLPNFVKTSGGKGYH
VLVPLKP....SADWEAVKTFAHDFAKALEQGAPDRYTATLSKKARTGKIFVDYLRNGRGSTTVAPYSSRAKKGATVSMP
VTWAEIEAGLAPNAFPIGDKTTLAKLAEA...DPWMDFFK
>GB|BAB05928.1|10174828/12-595
LPTGDN........WRYEVKYDGFRTILFWTKET.IRLESRNERLLTDQFP.EIHDFCQRISNKVEAWLPITIDGELVHL
VSPYRAHFAPIQTRSFMRKHETIAASSIKTPATLLAFDILELKGKTLVDLPYDERKKQLKALLKAIDVPLEPTIQSNACL
Q..MIPAQTDGQALWQAVELHHGEGVVAKDRFSDWTEGKRTNRWLKKKNFRQVTVFLTAYDPVN......GYFHFAVYR.
..DGTSVEVGNVTHGFEDHERETLIAFMKQNGMK............KGKR.YVLEPSVCFDVDCIDFDGK.HLREPMFHR
FRLDVKPAQCTWKSLQRQ...........................................LAPLPPQVEITHPDKPLWP
R....QMIQKIDYLYYLQEVAPAMLPFLIDRPLTVIRYPHGVRSNTEREAFYQKNCPDYAPSFVKTVRL......DEIRY
IVCNDIQTLVWLGNQLALEFHIPYHPVPYT.KPSEIVFDLDPPSISQFSLAVKAAQLMKNMFDALKLQSFVKTSGGKGLQ
LYLPLPD...NTFTYDDTRLFSKTVCELLCSQFPEDFTTERLKKHRGQRLYLDYLQHDEGKTIVAPFSPRGNEGGFIATP
LRWEEVTN..TLSPDQFPMKAVLERYRNGI..QPFATFAE
>GB|BAD64136.1|56909609/12-585
FPQSTG........WVAEPKYDGYRCLVSITDTS.IELISRNGRLLNHAFP.EVVSAFEERRTKLSNELPLVLDGELVCL
LNGYASHFPAVQTRSRMSNVHVIEKEMVSRPCQWIAFDILNQP.....NVPYRERRKQLLSFCKRADIPALTPLGGVPTL
G..VVESTSAIQALLTTVKRYNGEGIVLKKQLSPYNQNIRSKDWLKLKHYRLVPVLVTFFDATN......GYFHGSVYHQ
..QGALNEVAIFKHGLLPDDAKTLANFFRTKGTA............EKNG.FRLAPSIVVELACIGLSGG.QLREVSFVR
FLHHADPNDITMTTLFHG...........................................LYPLPDIVETTSLDKPLW.
.....EQVTKADYLHYLQAVMPFMLPFLYQRALTVIRFPHGTFAN...ERFYQKHIPNYAPAYVNSAWL......EDICY
ILCNNPETLIWLGNQLALELHIPFQTIESS.KPDEIVFDLDPPSQDQFGLAQEAALDMKQIFNRFQLPFFCKTTGGKGLQ
VHIPLEK...QTLTYEETGRFMKFVADFLCQQKPGKYTTERLKKKRRNRLYIDYVQHAYNKTVIAPYSMR..ETGFAAVP
LREDELASP.TLSPQQFSYVDVLRRIQQFE..NPFIGYER
>GB|CAB13197.1|2633694|BSUB0007/13-593
PPIGAE........WRYEVKYDGYRCILRIHSSG.VTLTSRNGVELSSTFP.EITQFAKTAFQHLEKELPLTLDGEIVCL
VNPCRADFEHLQVRGRLKRPDKIQESANARPCCFLAFDLLERSGEDVTLLSYLDRKKSLRELISAAKLPASPDPYAKETI
Q..SIPCYDHFDQLWEMVIKYDGEGIVAKKTNSKWLEKKRSSDWLKYKNFKQAYVCITGFNPNN......GFLTVSVLK.
..NGIMTPIASVSHGMRDEEKSAIREIMEQHGHQ............TPSGEFTLEPSICAAVQYLTILQG.TLREVSFIG
FEFQMDWTECTYAQVIRH...........................................SKPVHPKLQFTSLDKIIFE
K....NKKTKEDFIQYMIEVSDYLLPFLKNRAVTVIRYPHGSRSE....SFFQKNKPDYAPDFVQSFYD......GSHEH
IVCEDMSTLLWLCNQLALEFHVPFQTIKSR.RPAEIVIDLDPPSRDDFLMAVQAANELKRLLDSFGITSYPKLSGNKGIQ
LYIPLSP...EAFTYEETRQFTQLIAEYCTNAFPELFTTERLIKNRHCKLYLDYLQHAEGKTIICPYSTRGNELGTVAAP
LYWHEVQS..SLTPALFTIDTVIDRIKKQG..CPFFDFYR
>GB|AAU23040.1|52003098/13-594
APSGGN........WRYEVKYDGYRGLLKIAATGEVSLISRNSQPLENTFP.EISEFAKSMIETLKEHLPITIDGEIVSL
TNRFRSRFEYVQKRGLSKKAELIAQAAAKKPCQYLAFDLLVFNGESLTSLPYTERKRMLFDLMKELGLPMAPDPMAHARI
Q..YIPDTSDFHDLWKAVKRFDGEGIVAKKKDSRWAENKKTAEWLKLKNYKKAAVFMTGYNMAN......RYLTIAVYD.
..RGQIKEVGSVSHGLGEQERNAILSIVKQYGTE............TKPGEYTIDPSICMTVHYLTIHYG.TLREVSFVS
FEFDMAWENCTYNRLLLH...........................................SRNVHPDLQLTSLDKVIFP
K....SDKTKADYIGYLNEIGDFLLPFLDNRALTVIRYPHGSGGE....SFFQKNKPDYAPEFITSIRD......DEHEH
IICSDYSVLLWLANQLALEFHIPFQTVDTA.HPTEIVFDLDPPSKSEFPLAVRAAKELHRLFDQLGLLSFPKLSGNKGIQ
IYIPISK...NAFTYEETRLFTSFAASYCVSLFPDLFTTERLIKNRGGKLYIDYVQHAPGKTIICPYSTRGNELGTVAAP
LFWDEVHS..DLSPLNFTMEAVVKRTKELG..CPFESFFR
>GB|BAC14990.1|22778722/9-579
IPVGDE........WIYEVKYDGFRCKLIWSVANKITLISKNKHNITKKFP.EIIQWCENNYEFFKTALPLEFDGELVIL
NHRYQANFAQIQIRGRLQSTDRIEKKANLRPATLMVFDLTKLKGKKLYQSNLSLRKKYLDQLMQDIR........GDGRI
R..CVESFTSVSKINEIVYAAKSEGVVAKRKKSIYQKGKQHQSWFKIKNWRLIHGILTAYNPSN......GYFTVSVLE.
..NNQPVHIGKCKHGLEKDASQTVQKLFQEQGE.............FKDGIYYLPPAITSTIHTLDLYDE.ELREPEFKH
ITSSIAYSECTLDKLQLD...........................................MAQLPHSIDISNTDKYLWP
.....NNYTKQDLLVYIREISPWMLPFLRQKALTIIRCPDGITKE....SFFQKNLPDYAPDFLSSTSA......QEN.Y
IVCNHLRSIVWLANHGSIEYHIPFQRIGHV.TPLEIVFDLDPPDREHFKLAVHAANLLKHILDELELVSFVKTSGNKGLQ
VYIPIRE...GSMTYDETFLFTEAIAKTLEKSYPNDFTTERMKKNRHNRLYIDYVQHGKDKTLIAPYSPRMTKEGTVSTP
LYWNEVNN..ELDPTHFTIGNVINRVREIG..CPFANYHD