HMM Seed Alignment: TIGR02788
Download Alignment>GB|AAV87105.1|56388518/23-329
IFAEDGVNEISINRECEVWV-ENRGDIRCERIES-----LTLSHLKALGRLVAQAT--EQKLSE-ETPLLSASLPNGFRV
QVVFPPACEGD-KVVFSIRKPSTVQLSLDDYEKMGAFSH----VAQQGRKAMDVNKQLSELLDSGDIKSFIELAVLSKKN
IIVSGGTSTGKTTFTNAALRVIPKDERIITVEDSREIALDH-PNRVHLLASKG-GQGRAKVSTQDLIEACLRLRPDRIIV
GELRGAEAFSFLRAINTGHPGSISTLHADTPRMAVEQLKLMVM--QASLGLPPDQIVSYITNIVDVIIQLKR-----ESG
GVRHVAEIMF
>GB|AAK24394.1|13423964/17-320
WLDRADVTDIWVNRPGEVWI-ETTKGV-TSRLAAPD---LTDQALQRLARQIAAAS--HQGVSR-EQPLLSASLPNGARV
QIIAPPATRGD--LALAIRKHTLSDLSLSDLAIGGTL------APPALTGRADADAQLRALLSAGDVEGFLRTAIQRRKT
IVLSGGTSSGKTTLLNALVKEIPAHERLVLIEDAPEIQLRH-ENAIGLIAARS-DTGEAQVDAEDLLQASLRMRPDRILL
GELRGREAFAFLRAVNTGHPGSITTVHADSPQGALDQIALLSL--LAGVDLGWDTVRNYVRQVVDIVVQLNR-----VGG
G-RKVTAVEF
>GB|BAB54641.1|14028049/20-327
WLDDDRVVEICANGPGLVWV-EIVGSTHMEPFDVPE---LDRAAITYLMERIAASS--SQSISE-ENPLLSAALPGGERF
QGVLAPATPTG--GAFAIRKQVVKDMRLDDYRKRGSFDTI---SVQDPGELSETDSALCEYLDAGKIEDFLRLAVRERYS
ILLSGGTSSGKTTFLNAILHEVPSDERILTIEDTREVKPRQ-PNYLPLVVSKG-DQGLAHVTVETLLQAAMRLRPDRIFL
GEIRGAEAYSFLRAVNTGHPGSITTIHADSPTGAFEQLALMVM--QAGLGLRKAEIIDYVRAVLPIVIQQTR-----RGG
W-RGTSAIWF
>GB|AAL04069.1|15625418/20-328
FLQDKSLLEVIVNRPGQVLT-EGPGGW--RTYEMPE---LTFEKLMRLARAVASFS--HQSIDE-TRPILSATLPGNERI
QIVIPPATIND-TVSMTIRKPSSVDFSLDDLEEKGFFQTA---CAATSTSSSAQDEELCETYRAGRFKDFLRQAVIARKN
IIISGATGSAKTTLSKALIKHIPENERVISIEDTPELVISQ-PNHVRLFYSKG-RQGLSRAGPKELLESCLRMRPDRILL
QELRDGTAFYYIRNVNSGHPGSITTVHANSAELAFEQLVLLVKESEGVAGLDRADIVALLKASIDIVAQCRR-----NKG
N-FRLSEVYF
>GB|CAB60061.1|6249472|LPN19029/22-331
FLEDEHVSEILINKPKEVFI-ERHGQL--TRFDIPV---LTSQYLRRLFLLIANEN--KQTLSE-STPVLSGNLADGSRV
QLVIPPASLYE---TLSIRKFSLKQVSFDEYKTKGFFSSARGVGIKEHSECLDKSDELLELYDTKNWQEFIRQAIVSKKN
IIISGGTSSGKTTFLNSCVGQIPLHERLITLEDTYEMDVPH-TNIVRLKALKQVGEQTQKITMQDLVQATLRLRPDRIIM
GEIRGRELFDFVSACSTGHSGALATIHANNPKVAFMRMAQLYKLNQVA-GMDEADIYKVLHEVIDVIVQLQK-----TPD
G-RRLVEVYY
>GB|AAW88285.1|59482676/19-331
WLEDEDITEIAINQPNEVWI-EKHDQW--TSYSCNA---LSFDHLNSMATAVASFC--DNNISV-SQPILSATLPKGERI
QFVIPPACSPN-TVSITIRKPNIAQRTLKDYVRDGFFNH----VIPTQQTMSPIDKQLLDLKDT-DLSTFLKLAINAQKT
IVIAGGTGSGKTTFMKMLVDLIPKAQRIITIEDVSELFLPNTPNKVHLFYPSE-ATQSDPVTSAKLLKSCLRMKPDRILL
AELRGAETFDFVNIAASGHGGSITSCHAGSVALTFERLAAMMMKNPEAISLPYEAIVKLLHQVIDIVIHIENDVHSDNPI
G-RHITEVWF
>GB|AAM37467.1|21108894/28-337
YLNSPDVTEICINRPGELYL-ETIHGW--QRVDVPS---LTYDRARQFCTAVVNESNTGQRITD-ADPVVSLTFPTGQRA
QFVMPPACDAG-KVSITIRLPSKHTKSLEQYKHDGFFDE----VLEQSADVSDHDQELLELRRKRDYAEFFKKCVLYKKN
VVVAGATGSGKTTFMKALVNHIPNEERLVTIEDARELFISQ-PNAVHLLYSKG-GQSASNVTAKSCMEACLRMKPDRIIL
AELRGDESFYFIRNCASGHPGSITSCHAGSVEQTWDQLALMVKASNEGSGLEFEVIKRLLRMTIDIVVHIKA-----HAG
R-RFITGIDF
>GB|AAF85584.1|9112253|AE003851/32-337
FLDDTSLNEICVNRPSEVWT-EGRNGW--QRFDVPC---LTFSHCCKLATLIASYN--GKSITA-NKPVLSAALPGGARV
QVVIPPACETR-TVSITIRKPSMVDKTLDELEAEGAFDQVE--NVDASGTLHPYEVELLALKKSNRIKEFLKLAMQHGLT
LVIVGKTGSGKTTIGKSITNCIPTDERLVTVEDVHEMFLNHHPNKVHLFYSRD-GEGSLSINPKQAIASCLRMKPDRILL
TEMRGDEAWEFVKAVGSGHPG-ISTAHAGGALEAFDQIVALIKDSATGAHLDAAYIKKRVFETVDIVLYYVH--------
--HKLREIYY
>GB|AAR03917.1|37811849/39-326
FLKMENITEICYNGNKVVWVLKNNGEW--QPFDVRDRKAFSLSRLMHFARCCASFK--KKTIDNYENPILSSNLANGERV
QIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYN------------LLDNKEQAISAIKDG---------IAIGKN
VIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGN-------ITSADCLKSCLRMRPDRIIL
GELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINH--------
--HKQCDEFY
>GB|AAZ38090.1|71558881/25-326
RLNRPGTKDVAINRPYELWV-DGPKGW--QYEEAPW---LTYSLCWRLANALCALN--YRVLAP-HSPIHTVELPGGERG
QIVMAPACEKG-TLSTTFRKPSLDRFTHMDYVNSGRYDRARAIASPVLT-LKAWQRDMQEAHAAGHWHQFMEIAIANRQN
IIIFGGPGSGKTTYGKSLIDMFPVNRRMITIQEILEDPMPFHPNHVHLLYGHV-------VSPKALVASALRMKPDHLFL
AELTGDEVWHFIEILNTGTKGTVTTAHANDSEAGYARVCGLVKQSEVGKGLDYDYIERLVRTSFDVVVYMEN--------
--TYIEEVHY