HMM Seed Alignment: TIGR02868
Download Alignment>GB|AAV77755.1|56128249/4-533
LLPYLTLYKRHKWMLTLGIALAILTLLASIGLLTLSGWFLSASAIAGFAGIYSFNYMLPAAGVRGAAITRTAGRYFERLV
SHDATFRVLQHLRIYTFSKLLP--------------LSPAGLARY-------QQGELLNRIVADVDTLDHLYLRVISPLV
GAFVVIMIVTLGLSVLDVTLAITLGGIMLLTLFIMPPVFYRAGKNTGQNLTHLRGQYRQQLTSWLQGQAELTIFGASKRY
RAQMEATELQWHEAQRRQSELTALSQ-ALMLLIGALAVMLML-WMAS-----GGVGGNTQPGALIALFVFCALAAFEALA
PVTGAFQHLGQVIASALRIT--ELTEQK-----------PEVTFPQAETLAP--------EKVTLTLRDVSFRYPDQPIN
ALNALSLQANPGEHVAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDLPLSSLSESALRRTISVVPQRVHLFSATLRDNL
LLAAPNA----SDEALSDMLRRVGLENLLED---SGLNSWLGEGGRLLSGGELRRLAIARALL--------HDAPLMLLD
EPTEGLDATTESEMLELLA--DVMREKT-----VLMVTHRL
>GB|AAU18490.1|51976940/2-531
SNWIKPYVQQNKGRMTVTIFLGLLGVSSGAMLLFISGYLISKSALRPENVMA---VYVPIVATRAFSIGQAVFHYLERLV
GHDVVLRILEKMRTKLYGIVEP--------------QALFFRSRF-------QTGDMLGVLSEDIEHLQNLYLRTIFPSI
LALVVYSIFVLVIGAFDVVFALIAACMLAIIVFLLPFISLLLMKKHHVTLKQGRNRLYQQLTDAVFGLSDWQASGRKDEF
IDKYVEQNDQLLKIEKRMKRWNHIRD-SIIQLVVGIVVISMIIWTGN-----EA-ASEQIAPTVIAAFILMTLSVTNALI
PLSDAIDRIPSYVESAHRLN--QVEGNG--------VLQDEKELHGDKDYVA-------SKHIDIELKHVSYSYPDSNEF
VLKDVSLQIKAGKKIAILGRSGTGKSTLLKLLTGALSPLHGEVLLNSEHAHT---NLLSKCISVLNQKPHLFDTTIGNNV
RIGKPEV----TDEEIWKALEKAQLASHIAS-LPDGLQTKMHEMGKRFSGGERQRVAFARTLM--------QEAPIIVLD
EPTISLDPKTELSLIETMF--SATEEKT-----VIWITHHL
>GB|AAU25570.1|52005628/5-535
DGWILPYIKKNTRLLIIVVLLGGLTACSAAALMFTSGYLISKAATRPENVLM---IYVPIVAVRTFGILRSVSRYVERLT
GHHIILKILSDMRVRLYRMLEP--------------QALKWRERF-------RTGDMLGILADDVEHLQDMYLRTVFPGL
SALLLYGVFIAAIGFFSWPFAGLMAVYAAVFVFLVPLVSLLVTRAKNVALKRGRSHLYRQLTDAVMGVSDWVFSGRQNDF
VHSYEAAEHEWLAIEKKQVRFSRWRDFAMQCLAAGLVLLMLI-WAGG------QSAEGALAPVFIAAFVLVVFPLTEAFF
PLSDAAASIPEYQDSLERMD--GLQPPK-------RGNGADVQQERAEAVGL--------DDVTLRFEDVSFSYEQGQP-
VLDGVSFILKQGEKTALLGPSGAGKSTILSLIQGALAPSKGNITLNDISVQSL-QGEISRVVSVFNQQPHLFDTTVLNNI
RLGNPDA----SDEDVYWAARQVKLHDYIQS-LPDGYHTSVQETGIRFSGGERQRIALARILL--------QDAPIVVLD
EPTVGLDPKTEKELLSTMF--QVLDGKT-----VLWITHHL
>GANORF0487_A.naesl/38-574
LRRAVGLLNLDRSRFALAVVAGTAGMASAVALSGVAAWLIARASQMPD-VVA---LGVAPVAVRLFGISRSVLRYCERLV
SHDTALRGMGALRTRLYESLAS--------------ARTDTVAGL-------RRGDVLARVGSDIDAVGDLVVRAYLPAA
VAAVLGAATSLGIALVYWPAGLILLACLLLSGLVGPLATIRSARIAEQARQRQATELSAEVLAVLEGAPELTVSGRLAGS
MRQVASREESLTRLRDRAAVPAAIAA-AVDVAAMGLAVLGNL-VVGV-----SAVSAGQLAPVWLAVIVLVPLAAFEATS
ALGPASVQLVRSAGAACRIV--ELIEAA---EASAASGSAMSSAPRELPEPS-------AQGPYLKARGLAVGWPGGPV-
VAEGIDLDLRVGRRVAIVGPSGIGKSTLLATLAGLLEPRGGTLTLDGVPPWQAAHSEVAARVCLTAEDAHVFHTSVLENL
RVARGDV----TPAEAGELLSRTGLGRWLEA-LPEGVETIIGTDATTLSGGERRRLLLARALA--------APAPLMLLD
EPGEHLDALTADRLVTDLL-TAGDQGRG-----TLLVTHRL
>GB|AAS03630.1|41395763/20-546
LLAAAGLLSPRLPRLAAAITLGVLSLGSALALAGVSAWLITRAWQMPP-VLD---LSVAAVAVRMFAISRGVLHYCERLV
THDTALRAAGAARVAVYQRLTR--------------GGAAATVRL-------HSGELVARVGADVDELANVLVRALVPMG
VAAVLAVAATAVVAAISPAAGGVLAICLLVAGFVAPRLAGRAAATQEDIARQQHSQRDSAAMLALEHAPELRIAGLLPDV
IAESQRRQRAWGAALDAAGKPAAVAE-AMPTAAIGASVLGAV-VAAI-------GMAHAVAPTTLAVLMLLPLSAFEAMT
PLPAAAVQLTRSRIAARRLL--ELTATE--------PPRPAGSAPRP-------------TGPGRLTADIHSGHDGAAR-
-ESRVTLDLPPGARLTVTGASGCGKTTLLMTLAGLLPPLQGQVVLDGVALSEFDECELARAIVFFAEDAHVFATTVRDNL
LVARGDC----PDDELTDALEAVGLGDWLAG-LPDGLSTVLTGGAQAISAGQRRRLLLARAVI--------SPARIVLLD
EPTEHLDAGDAERLLRDLL--APDSRLLPSPRTVVVATHHL
>GB|BAD55433.1|54014063/16-520
LRRMGELLEPARGRVAVAVTWGVVALGSALGLAALAAWLIARAWQMPP-VLD---LSVAVVSVRALGISRGLARYLERLA
THDVALRSMTNARAAVYRRLARSDVWLRRDRRSGSGAAADSAARL-------RRGDLLVRIGADIDDLGAVIVRALVPIA
VAAVLALAAVGLIATISVPAAIILAASLAVAGVLAPWLSARAARSAEVAVRADRAEFTARALTVLDHAAELRVAGRLAGT
VTAARDAGRRSVAAEDSAAARTAWSA-AATPLALGASVLGAL-LIGVVAYGPGGGLPGGMTPMALTILVLLPLSAFEATA
ALPAAAQSLTTARAALHRIE--GATRAA---------------VATDGDAAP----------------------------
----VRPDLPPGRRIAVVGPSGAGKTTLLMFWAGLFDTPRPDVT-------------------FFAEDAHLFGTSVLENL
RVARGDV----TEAEAERALRSVGLGDWLDA-LPDGLSTDLVGGAAAVSGGQRRRILLARALV--------SPARVLLLD
EPTEHLEAGAGADLLRALL--DADSGLVEPDRVVVVVTHQL
>GB|BAC18060.1|23493089/1-521
---MIPVQLIRTRDLVSPVLAGTLTLVASIALTVVSAWLITRAWQMPP-VMD---LTVAVTAVRALGITRAVFRYIERLV
SHDVALSSAARARSVAYERLA---------------GSGASVGAM-------SRGSLLTRLGSDIDAVADVIVRAIVPVG
VAAVTGVLSVSFAALLSWEVALVLAVGLVLAAVVPSGLSARAVRQAEALRARSVEAYTAAVDRVLADAVALRVGGGMEPA
LAQADSAARSYARAGESGASADAVGA-ASSLWIHGLTITGVL-LVAG-----TAYLDGGHSPQWLAVLVLLSLAAFEAVS
VLPNAAVAWTRGAGARARLE--EVLRGS----------GALGVVPAAGAVVS--------DEPRLVARDLSYGRDTD---
-LGVINLDLPFGARHEIIAPSGSGKTTLLMTLAGILPPRGGEVSVDGYSPASVSGT----VVLFSAEDAHVFATTVRDNL
ALGAADA----SDEEMMEVLEAVGLADWVAE-LPGGLDTVLGSGAASLSGGQRRRLLLARVLL--------TDAPILLLD
EPVEHLDAGGAAEMLEMLN-RDALPGRR--ARRTVVVVRHP
>GSCORF2762_S.clavu/588-1121
LTRVRDAAGTQRGRYALALLLGSLALGSAVGLMAVSGYLISRASEQPP-VLY---LMMAVTATRAFGIGRAVFRYAERLV
SHDAVLRTLGELRVAVYSRLER--------------ISPAGLRRS-------RRGDLLSRLVTDVDALQDYWLRWLLPAG
AALLVSAASVGFTAWLLPEAGALLAAGLLCAGVGVPLISGAVARRAEPRLAPARGELAARLVDLLRGTAELTVAGAMPAR
RDGVREADRRLTRIAARTAAATALGS-GLTSLACGLTVVLTT-LAGI-----RAVSDGRLDGVALAVVVLTPLAAFEAVN
ALPLAVQYRQRVRRSAERVY--EVLDAP--------VPVAEPEHPAAAPASV----------FPVEVRGLRARHAGAARD
AVDGIDLTLTEGSRIAVVGASGSGKTTLAQVLLRFLDAREGSYTLGGVPAAALDGDEVRARVGLCAQDAHLFDSSVRENL
RIARPDA----TGEELRRALAGARLLEWVDA-LPEGMDTLVGEHGARLSGGQRQRLALARALL--------ADFPVLVLD
EPAEHLDLETADALTADLL--AAGESRTARGGATVLITHRL
>GB|AAZ54673.1|71914771/13-542
LLRMIALARPRTTRFVLGVLLGALATGAGVGLLSVSAWLLATAATHPP-ITA---LGVAVVATRALGVTRGVARYLERLV
THDAAFRTLAEVRVRVYERLAR--------------SEP--VRRF-------RSGDLVSRLVNDTDATQDLLVRGLTPPL
SALAVGSAVVLLSTVLFVPGGLLLAAGLLLGGLAVPLFAAALGRTSGRHQAAARGELSSALVDTLYGAPDLVAYGAMEQA
VRRVERADAELTRLARRDAAVLGLGT-GASALVAGLTVWATL-LLGV-----AAVAGGTLDAIAFAVVVLTALAAFEIVA
PLPAVAAKLEAIRTAGARLF--DVLDTE--------PEVKAAAAPEQSGLPD--------QAATLRVRDLRVRYGPDEPW
ALDGVDLDLAPGKRIAVLGPSGSGKSTLASVLFRFRDPDAGTVTLDGADITDYPVDEVRRLISGVPQDPHIFASTLRENL
RLARPGA----DDAELWAALERARLADDIRATMPDGLDTEVGAHGARLSGGMRQRLALARALL--------AQPRILVLD
EPTAHLDPDTRDAVLDDLL--AASAGYA-----TLLITHDL
>GB|AAT89080.1|50951379/16-555
IRRILRLALPPGRRLAVAIAFGALSGGSAVALLAVSAWLIARAAEQPA-LMY---LSAAAVGVRAFALGRAFFRYLERLA
GHDAAFRRLGGVRADMFARLVP--------------LAPDGLGRAGHGLGEAGGGDLLARFADDVDDLQDYTLRVVQPLI
TAVLVVLLSVAAAFWLLSGAGLALVATLAAAFLVGALVNRWAAGSAERRIALLRASLADSILDLVRSLDTLIAYGALPAA
QKRVSIASAELIRVVRRRATGLGLTA-GAVSLFAGVATALGL-AAGV-----PALSAGRLDGPTLAVLALLPLAVFEAFG
ALPLALGAWRRVRTSAERIA--ATAPDA--------LPAGIPVDAADAVSLV------CRGVPQLCLSRASAHWPGASAP
VLRGVELTLEPGERVLLSGATGAGKTALAHALTRLID-LDGQYTIDGVDVCSVRQDDVRAIVGLCEQRPHLFDADLRQNL
LFARETA----TDEELLAVLERVRLGEWARE--RGGLGTPMGERGALVSGGQAQRIALARALL--------ADFPVLIVD
EPTANVDAAVGSQIVHDILSTAAEDGRT-----VLLISHSE
>GB|AAT81930.1|50839263/9-521
LKTLLRDVPRGRWLLVLSTLLAACASGASVALMGVSAWLLSRAAEMPP-VLY---LEAAAVGVRFFGISRGVFRYAERLV
GHDLALRMQGALRMRVYDRLSR--------------TTLLGRRR----------GDLLVRVTADVDAVLDMVVRVIVPAC
ASSLVIIGTTVLLARFSLTSAAVLLLSALLAAVVMPAITQRLSRAADSSLVPLRGQLADRTRELAHCAPDLVAYGAQDAI
LADVLEVDSRLRTAEQRAAWGRGLGT-AGQILAAGLAVVSAL-WIGG-----NAVADGRIGGRILAVLVLTPLALHEVFG
AFTGAAQTHTRAKAALQRVV--EVLDAP---------QVGVGDSPTAAASEE---------KPSLVIEGLTVGWPGNQP-
VLSNVNLHVVAGESVAIVGRSGIGKTTLAATIMGLIPPLTGTVTTTG-------------RVRYLAQNAHVFATSISENV
RIGCKEA----TEDEVLTALSRAGLAIPPRR--------VVTEDGSSLSGGEAQRLALARVLVNHGTPADPATHDLLILD
EPSEHLDVETSEALMSDLW--ATTSGTA-----KVVITHDP
>NT02AS3471_A.sp./624-1162
PARIFRLLQPESLKFGSAGIMGVLAALFAVALAGLSGWLIIRASEQPP-ILY---LLTAIVGVRFFGIGRAVLRYTERLL
LHDAVFASLTRLRGRLWDSLSR--------------RALSLRRLL-------QGGNVLGAVIDDVDTVRDLLPRVVLPPV
TAVAVGASAVAASALLLPAALPAAIAAALVSLAAAPAAALLADRMSAQAEQRLRSGVLRDVAAALDARAELHANGVAGPV
LAAIGDADKDATAASQRSAWAEGLGQ-ALTVLACGSAALASA-VLAG-----PAVMDGSVAPATAAVVVLLQLALVDPYA
AITTAVRQYPALRQVLDRISEAGVLDAPAAADPGANGPRQDASGPAAGTGGLEPVASRPGGLPGLELQALSAAWPGSPE-
VFTGVSATAEPGRWLAVTGASGSGKSTLLAVMLGFLPPHSGRLAVSG-------------RAAWCPQEAHLFDSTIRGNL
MLGRPEGAAGDAGQDMAAALAAVGLEPLLRR-LEHGADTRIGPGGAFLSGGERQRLAVARTLM--------TGADVILLD
EPTAHLDAEAGREMLADLR--KGLTGRT-----VVLVTHNP