HMM Seed Alignment: TIGR03069
Download Alignment>RF|NP_564622.1/44-318
PLRQSALRRCYSAEAIKGDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVA
QGGYPEAERCRISIGHPDVLT-SDPDI------VAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQEEKGAQV
LIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNW
ATVTKNGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR
>OMNI|NTL01NS2885/2-257
LPREELLKGVENRD--------------------SVARVIDQAEQAIKTWEVVVTDFLSPPELAEIQRVFSRLTDVQLVA
WGGYPQAERQRLAIARAELP--LDQSQ----VSLLVLEIAGNFLFDSATHRDFLGAMLGTGIVREKTGDIIVLGERGAQA
IVVPELAEFLQIHLNQVRSVPVKTQPIELTELKVREPKK-KELTTVEASLRLDAIASAGFGMSRSKMVDFIDSGDVRVNW
KEVTQASSQVKSGDLIAIRGKGRLEVGEIAVTKKERYRVQLTR
>OMNI|NTL03SE1501/2-257
LPRQDLLAGADNRD--------------------CLARLIDLAEQSIRTWEPAISDFLSPPELAEAQERLGRLTELQLLP
WGGYPQAERQRLAIARSEMP--LDVDQ----IAIAAVEIAGNFLFDPASHRDFLGSLLGTGLVREKVGDILVLGDRGAQA
LVMPELVEFLGLQLTQVRSVPVKVREIPLAELRIPAPRI-KQLTTVEASLRLDAIASAGFGLSRSKMVDLINRGEVRVNW
KAATQPSTQLKTGDLVAVRGKGRLAIGDVQVTKKERYRLELTR
>OMNI|NTL01GV0391/5-260
LPREELLKRAEHRD--------------------ALARVLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEVHAAA
WGGYSQAERQRIAVSRDNIA--IETAA----IPLAAVDIRGNFLFDAASHRDFLGAILGTGIVRGKVGDILVLGDRGAQT
LVAPELVPFLQTSLTSVRTVPVQVVPIGFEELRIRPPQT-KEITSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNW
KTVTQPSKNVQTGDRITLRGRGRLEVGPVDTTKKGRYRVQMIR
>OMNI|NTL01SS01582/2-257
LPREALLKGAPDRE--------------------AIARVIDQAEQALRTWEVVVSDFCAPPLIAEIQTRFDSLTELHFLP
WGGYPQAERQRLAIARAEIP--LETEQ----IPLTALDVAGNFLFDPASHRDFLGALLGTGLVREKVGDIILLGERGAQA
IVVPEVAEFISLHLTQVRTVPVKAKAIALEELKIRPPKT-KEMTTVEASLRLDAIASAGFGLSRSKMADAVTQGNVQVNW
KPVTQSSYALKAGDLVTYRGKGRLEIGEITVTKKERYRIQLTR
>OMNI|NTL03PM1435/3-261
LSRKKLLKGCIYPK--------------------KIEQLLIETEHVLKTWTPIWTSFLSAPVQEEIKNVFKEIADISYSS
NGGYPNAERKRILLQRQQNETFLNDEN----VPIKAIKIEGNFLFDRTEPEDFRQSIAETGVKAEEIGDLWITGDRGAQA
MCTPEALKLLQNNQGFIRDVEIKYKSIDLTDLRIPFQRNPKKITSVEASKRLDAIASAGFGISRAKIISQIREGRVRLNW
HTINNASRALTIGDRVDLEGKGSIEVLNLEITKKDRWRVELIR
>OMNI|NTL05SS0519/3-260
LLKEELLTGADDPA--------------------GLRQLIQLADQVVRTWQPAWSPFLDARLQEEALERLSNLSEIGWHR
DGGYPGAERCRFLCQRRDPI--GDADT---CAPVQGLLIEGNFLFDPLSPEDIRNALQELGAAPDQIGDLWVRGDRGGQG
LCTPESAARLHEQRGRVRDVEIRCEALPIEALHLPAQRTPRILQTVEASCRIDAIASAGFGLSRAKIVGHIKAGRLRVNW
HDVRLASRDVGVGDRLQLQDRGALEVLSLTRTKRERWRVELRR
>OMNI|NTL04PM1432/3-262
LPRQELLKGCLDPQ--------------------GMEALLVQADTVLRTWQPSWSAFVSAPLREEALHRFSTLTDLHWHA
DGGHPGAERQRLCCWRSEDHHHPTPSQ---AAPIHGLLLHGNFLFDSPSPTDLRQALEAIDAQPEQLGDLWIRGDRGAQA
LCTPELAVNLDGRSSRVREVEITCEAVAVAQLQPPAHRLTRRLNSVEASCRIDAIASAGFGLSRAKVVNQIKQGHLRLNW
EPVRQTSRELVVGDRLQLQGRGTLKVLALEMTKRQRWRVEMLR
>OMNI|NTL06PM0928/3-261
LPKEKILFKSPFHK--------------------ELETLLHFAEKALSERTAIWSPFLSAQLIEEVKDRFNNLNDISLLF
EGGFPSAERKRICFLRSVEEM-HSPSI---EIPIKGIYIKGNFLFDRAKQSDFRDLIHELHDQADDIGDIWLIRDRGAQA
ICTKKCADSINQKIGKLREVEIIIHALDLNEMEIPFNRPEKVINTVEASTRIDAIASAGFGLSRSKIIKQIKEGCLRLNW
ALNDQPSKSVNIGDLIHLEKKGSLKILNIDKTKKERWRIKLLR
>OMNI|NTL03SC0531/35-290
LPREDLLTKARHPE--------------------GLAALLDLAEQVLRTWQPSWSDFLDAPLQEEALKRLSDLSELAWHR
DGGHQGAERCRLLCHRRDQP--VESTP-----PIQGLLIEGNFLFDPLTPEDLRSALHNMGAQPEDLGDLWVRGDRGGQG
LISPNAAELLQGRRGQLRDVEIHCDVLEITQLQLPAQRNPKRLTTVEASCRIDAIASAGFGLSRSKVVSQIKAGRLRLNW
EPVLQGSRELKVGDRLQLQDRGSLELLSCTLTKRERWRIELMR
>OMNI|NTL06SC2152/2-257
LPREELKAGTQNPE--------------------ELTLLVDLAEQVLRTWQPAWSPFLSAPLREEAMARLGSLSELTWMS
DGGYPGAERQRLLCHRRDDS--PDAEP-----PIQGLLIEGNFLFDPLSPEDLREALQTMGVDADNIGDLWVRGDRGGQG
ICTPSAAKALHGRLGAVREVEIRCESRPLEQLQQPVQRSVRTLQTVEASCRLDAIASAGFGLSRAKIVTHVKAGRLRLNW
GNVRQASRELVVGDRLQLQDRGSVEVLSLTRTKRERWRVELRR
>OMNI|NTL07PM1454/2-262
IDLKEILINSNYKE--------------------ETEELINIANLAYKHWETYWTGFNSTYVCEEISKDFENLNDFKFFV
YGGFSSSQRSRIACFRGDNI--PEEDALKSNFPAQGIKINGNFLFDNATQDDFRSLLIENGVHKVKVGDIWTIGDRGAQG
IIDNLDIEHLNEKIFYLRDVKVKINLVGIDELQIPSGRTKKLVNTVEASTRLDAIASAGFRISRTKIIERIENGMLKLNG
SKVNKPTINLKIGDKLELENKGFIEILNLEITKRERWKVKLLR
>OMNI|NTL02PM1353/2-262
IDLKELLINSNYKK--------------------EIEELINISNLSLKHWQTYWTGFNSTFVCEEILKEFENLNDFKFFV
FGGYNSAQRSKIACFREDNT--PEKNELIKDFPAKGFQMNGNFLFDNATQDDFRSLLVDNGLREERIGDIWTIGDRGAQG
IIDDSKIEFLDEKIFSLRDVKVKIKIVSLDELQIPAGRSKKIINTVEASTRIDAIASAGFRISRNKILERIETGMLKLNG
KTVKKGTISLKVGDKLQLDNKGFIEILDLEITKRERWKIKLLR