HMM Seed Alignment: TIGR03104

Download Alignment

>OMNI|NTL01TC0595/1-596
MCGICGEIYWDGQMASETKLVPMLAELEKRGPDDGGTWVQNHVGLGHRRLSIIDLSDGGHQPMLDDEI--SLVFNGCIYN
YETLSAELIELGHEFRSHSDTEVILKAYRQWGMECVSRFEGMFAFAIWDDHQHQLLLARDRFGIKPLYYAPVEGGVRFAS
NTQALLASGGINTDIDPVGLHHQFTLHAVVPAPHTILKGIRKLEPGHWMIVNPDGQMYKKSYWHLEAKRPTADNAPQTEK
EWIDAIHESLKQAVHKRLTAADVPVGVLLSGGLDSSLIVALLAEAGVEDIRTFSIGFEDVPE--EKGSEFEYSDLVVEQY
QTAHQKYLIPNETVLPRLTEAVDAMAEPMFGQDAIAFYLLSEKVSEDVKVVMSGQGADEVFAGYFWYPMM---AKAAESL
KDASRPVDAFAPYYFDRSHEEWLEMIEDEFHVY-DVTSELINDRLSDKGADSYLDQVLRLDTTTLIVDDPVKRVDNMTMA
WGLEARVPFLDHHLVELAMSAPTDLKLKDF-KYILKKIARGIVPNEVIDRPKGYFPMPALKYVRGPFYEMMKSILTSPQA
KARGIFKPAYIQKLLDHPEADESFTAIKGSKLWHAALLELWLQRH
>OMNI|NTL03RF3652/1-591
MCGICGELRFDGAAPDLAAIARMSAQLARRGPDDAGTYQNGPLAFGHRRLSIIDLSAAAHQPMVDAALQLALVFNGTIYN
YRELRDELLSMGYTFFSEGDSEVILKAYHAWGDQCVKRFIGMFAFAIWDQRSDQLFLARDRFGIKPLYLNQTGQRLRFAS
SLPALLAGGGVDTTLDAVALHHHFTLHTVVPAPRTVLQGVRKLPPASTLRLEPDGTSTQQVYWTLDATRP---DKALSEA
QWLAATRAQLALSVKRRLLAADVPVGVLLSGGLDSSLLVGLLA-SQVPDLRTFSIGFEGVGAGSEKADEFEYSDQIAQQF
HTRHHQFSIPNHEVMQRLPEAVAQMTEPMVSHDVIAFYLLAERVSKEVKVVMSGQGADEVFGGYFWYPKM----DAAQG-
----SPLARFSQHYFDRDHAEYLQMIAPAFQVG-DVTSKLIAGELSKPQADTFLDQVWRLDATTLIVDDPVKRVDNMPMA
WGLEVRVPFLDHELVELAAHMPPELKLKEGGKFALKAISRGLIPDAVIDRPKGYFPVPALKYVRGPFLELMRGILMSHAC
IERGLYQREYVNKLLADPEAPEHFTRIQGSKLWHLALLEWWLQVH
>OMNI|NTL01TD0060/1-587
MCGIAGELRFDDRAPDAATMTRMLARLARRGPDAEGQHAAGPLRLGHRRLAIIDLSPRSAQPMVDAATGTALVFNGTIYN
YPELRAELIALGHAFHSDGDTEVILRAYLEWGERCVERLHGMFAFAIWHRD--ELFLARDRLGIKPLYYSENAGSLRFAS
TPQALLAAGEVDTGLDAVALHHLFTLHAVVPAPRTILNGVRKLAPGTTLTVNLRGELRHRSYWSLHAQRP---AETRSEA
EWTDAIHDALRRAVQKRIEIADVKVGVLLSGGLDSSLLVALLAELGVSDLMTFSVGFEDHPE--ERGNEFEYSDPVAAMY
GTRHHKYLIPNSEVLRRLPEAVGEMSEPMFAQDAVAFYLLAEQVSRTVKVVQSGQGADEVFGGYFWYPRM---AAEAEG-
----SALDRFRRHYFDRDHAEFLELADPRYHGP-DYTGELIAARLAEPFADEFIDQVLRTDTTMLITDDPVKRVDNMTMA
WGLEARVPFLDHTLVELAATMPPAMKLASEGKHVLKRIARGRVPDAVIDRKKGYFPMPALKYVRGEFLDFMRDILDSQAC
RQRGLYRRAYVEHLLDAPE--QHHTRIQGSKLWHLALLEYWLQTH
>OMNI|NTL01ME6535/1-587
MCGICGEINF-GGIADPNAVRAMMEVLRPRGPDAGGLHGQGGVLFGHCRLKIIDLSEAGQQPMVDAELGLSVVFNGCIYN
YKDLREELVAKGYRFFSTSDTEVVLKAFHAWGRDCVKRFLGMFVFAVHERDTGRVTLARDRLGIKPLYYAETGKRFRFAS
SLPALLAAGDVDTTIDKVALHHYMSWHAGVPAPLTILKGVRKVHPATTLTFEPDGSRREETYWSLVVGPR-EEDRHRTEA
DWRAAVLDSLTRAVARRQ-IADVPTGVLLSGGLDSSVIVALLAKSGQSGLKTFSVGFDAVNG--VEGDEFKYSDIIAERF
ETDHAKLIVDGSRTLEALPAAIHAMAEPQMSHDAVAFLLLSQEVAKHVKVIQSGQGADEVFGGYHWYPKL-----MGST-
----DPTTDYANAYFDRDHAEMREALTPDFVDE-DYSRDFIARFFADSQSASAIDKTLDLDQRIMLVDDPVKRVDNMTMA
WGLEARVPFLDHELVELAARIPAELKVRDGGKYILKEAARAVVPAEVIDRPKGYFPVPALKHIRGPFMEFVRDVLDRPAA
RERGIFNRTYVDRLLADPD--GTLTPKGNSKLWQVALLEAWLQSH
>OMNI|NTL03PA03459/1-587
MCGISGEFRFDNQAADLAAVERITHHLAPRGPDAWGFHAQGPIALGHRRLKIMDLAEASGQPMIDPDLGLAMVFNGAIYN
YPELRGELESLGYRFFSGGDTEVLLKGYHAWGADLLPRLNGMFAFAVWERDRQRLFLARDRLGIKPLYYSLDRSRLRFAS
SLPALLKGGDIASDLDPQALNFYLNFHAVVPAPHTLLEGVKKLPPATWMSVDLDGSCEQRTWWTLDYGPR-PDERELTLD
DWQERVLDGLREAVAIRQ-RAAREVGVLLSGGVDSSLLVGLLHEAGVDNLLTFSIGFEDAGG--ERGDEFQYSDLIAERY
HTRHHRLRIGEHEVIEQLPAAFRAMSEPMVSHDCIAFYLLAREVSKHCKVVQSGQGADELFAGYHWYPKV-----DGAD-
----DAFAAYRAAFFDRDHEEYLATVGERFRVE-DVAGRFVRDHFASPGAEAAVDKALRLDSTIMLVDDPVKRVDNMTMA
WGLEARVPFLDYRLAELSARIPARFKLGDGGKQVLKGAARKVIPSEVIDRPKGYFPVPGLKHLQGRTREWVRELLLDPS-
QDRGLFQPAIFDRLLSDPD--GDLTPLRGSKLWQLAALNLWLSEQ
>OMNI|NTL01HC1586/1-588
MCGICGEIRFDNHSPDLNFIRLANDIQTPRGPDAEGVFAQNNIAFGHRRLKIMDLSDASQQPLYDPALGLAVVFNGAIYN
HRELRSELEGQGYKFYSDGDTEVVLKAYHAWGRECLSRFNGMFALAVWERDSGKTLLARDRLGIKPLYFQHDAKALRFAS
FMPALAKAPGFSAKINPKALNMYLNFHSVTPAPDTIFEGIYKVQPGTWMELDKSGNINTGSYWSLTFGMQ-PGDEAMTAE
DWRDRLLEALFASVRRRN-NAAVEVGVLLSGGVDSSLLVGLLAEVVPDGFQTFSIGFEAVGG--EEGDEFHYSDIIANHF
NTRHHKIQIASDRMFSALPKAIDAMSEPMVSHDCVAFYLLSQEVSKYCRVVQSGQGADEVFGGYHWYPPL-----VGAQ-
----DPYACYREAFFDRSYEEYRQTVQPRWIAP-DYAGEFVKQHFLRPGADDPVDKALRLDMSVMLVDDPVKRVDNMTMS
AGLEARVPFLDHELVELAARIPSPLKVRDEGKWILKEAARRVIPHQVIDRPKGYFPVPALKYLRGTILEWVKEALSTQSA
RERGLFDQAYVDNLLLSPD--MHITPLRGSKLWQLGLLELWLQRH
>OMNI|NTL03MA1421/1-594
MCGVTGEVRLDGRAPDVAAVSAMAAVLTPRGPDAGGAWSQGRVALGHRRLKIIDLTEAGAQPMVDSELGLSIAWNGCIYN
YKELRSELSGYGYRFFSHSDTEVLIKAYHRWGDDFVSHLFGMFAFAIVERDSGRVLLGRDRLGIKPLYLTEDSHRVRFAS
TLPALLAGGGVDTRIDPVALHHYMSFHSVVPAPATILRGVRKVPPASLVAIEPDGKRTVTTYWAPDFTRH-ADRADWSER
DWEDAVLSTLRLAVKRRL-VADVPVGCLLSGGVDSSLIVGLLAEAGQHGLSTFSIGFESAGG--VKGDEFQYSDIVAQRF
ETNHHQIRIDSDRMLPALDGAIGAMSEPMVSHDCVAFYLLSQEVARHVKVVQSGQGADEVFAGYHWYPPMGEPAAATLD-
----GAVAQYRRAFFDRDTAGVAQLVGPGILAPGDPSLRFVTEHFAQAGAETGIDRALRLDTTVMLIDDPVKRVDNMTMA
WGLEGRVPFLDHELVELAATCPPEYKIAHEGKGVLKQAARRVIPSEVIDRPKGYFPVPALTHLEGPYLDMDRDALYAPTA
KERGLFNTDAVDALLANPN--GKLTPLRGNELWQIALLELWLQRH
>OMNI|NTL01FS2910/1-591
MCGLSGELRFDGRGANVDAVVRMTATMVPRGPDGVGVWSAGPVAFGHRRLKIIDLSECGAQPMVDNELGLTTVFNGCIYN
YQELRDELIAAGYRFFSTSDTEVIGKAYHRWGRRCVDHFAGMFAFAIAERDSGRLILARDRLGIKPLYLTGNSERLRFAS
TLPALLAGGGVSSDIDLVAFHHYLSFHSVVPAPHTILAGVRKLPAATVRVVEPDGTSTDDLYWRPSFTRD-PAHADWTAR
DWQDAIAERLRLAVRRRM-VADVPVGVLLSGGLDSSLIVALLAEAGQKDLATFSVGFEAVGG--EPGDEFVYSDVIARYF
DTDHHQIRVPGTRLLPAVDAAVAAMSEPMVSHDCVAFYLLSQEVSRHVKVVQSGQGADEVFAGYSWYPPL---AGVGRT-
----DAVDAYLRVFADRPHRDLPAMVEPHHLIEADASRHFVASHFARPGAETAVDAALRIDSTIMLVDDPVKRVDNMTMA
AGLEARTPFLDHELVELAAACPPELKLASGGKGVLKNIGRPLMPVDVIDRPKGYFPVPAIRHLDGPFLDRVREALTDPAA
KARGLFRPVWVQTMLAAPN--DNRTALGANALWQAALLEMWLQTH
>OMNI|NTL01SMB00463/1-589
MCGICGEVRFDGGSPSVTAVSIMADVLAPRGPDASGVVVRGNVGLGHRRLRILDLSDKSQQPMVDSDLGLSLVFNGCIYN
FRELRLELEEKGYRFFSSGDTEVILKAWHAWGEECVSRFHGMFAFVIHERDSGRVVMARDRFGIKPLYIAEVQGALRFAS
ALPALVKAGGVDTSIDVAALHNYMTFHAVVPPPRTILNGVRKLPPATLRVYERDGSFEDRRYWDPPYRRQ-AGDAAISRE
EWQEQLLDALRIAVKRRM-VADVPVGVLLSGGVDSSLIVGLLAEAGQRGLMSFSVGFEEANG--EKGDEFVYSDLIAGHF
GTDHRKIFVPSADLMGALPGTIAAMSEPMVSYDNVGFYLLSKEVSKHVKVVQSGQGADEVFGGYHWYPPL-----MNSN-
----DVVADYGKAFRDRSHAVLTTQLSDAWIADHDVSGDLLNEHLLREGAATPVDQALRLDSNVMLVDDPVKRVDNMTMA
WGLEARVPFLDHELVELAARMPPEEKLRDGGKGILKDVARRVIPSEVIDRKKGYFPVPQLKYIAGPYLDLIRDTLRSQKA
RERGLFQDAYLDRLFQEPS--DHITPLRGSELWQVGLLEMWLEAQ
>OMNI|NTL01AE2992/1-588
MCGIAGEIRFDGQSPDVGALERMNARQRVRGPDSGGVFVQGALGFGHRRLKIIDLSESAQQPMFDPALGLGIVFNGAIYN
HAALRRELETLGYRFYSRGDTEVLLKAYHAWGQDFVQRLNGMFAFAIWERDSGRVVLGRDRLGIKPLYYSAQPGLLRFAS
SLPALVAAGGVDTTVDAVALNHYLSFHAVVPAPHTILAGVRKLPPATLMTIHTDGRRSERSYWSLAYAHE-PGDAARSFE
EWTEILLEGLRSAVGRRL-VADVPVGALLSGGVDSSLIVGLMAQAGVQGLRTYNVGFEDVGG--EKGNEFEYADIVAERF
ATIHERIFVPEAQLLARLPEAVAAMSEPMVSHDCIGFFLLSEAVSRHSKVVQSGQGADEVFGGYHWYPKL-----AGSV-
----DPVGDYLAAFRDRDYDEYCRMVGAANRAD-DCSGAFVAAHFDLPGAIDPVDKALRLDTTVMLVDDPVKRVDNMTMA
FGLEARVPFLDHELVELAARIPARHKLAHGGKGVLKEAARQVIPSAVIDRPKGYFPVPGLKYLQGQVLERVRDALTNRAA
RERGLFRREYVDTLLADPG--AHMTPLRGSKLWQLGLLEWWLQTH