HMM Seed Alignment: TIGR03185

Download Alignment

>OMNI|GAC_ATCCORF3299/1-652
MTFLEIDLENLGPFRGR---HAIKLAVSSP----RNIVLIGALNGSGKTTLLNAFQLALYGRDSL-PGRSAKNYQQYLRH
LINNQAAL---HESASITLTLILDDLADDCHIRVERRWWRSQNNEVREQLTVWKGS------------EASDDLTQT---
-WDT-FIASILPARVADLFFLDGEKIEALTAPDQAASIIRKGIFTLLDLDRIEELRANLRVVKRRRLNSIEGEE---NSD
EIRVLEGKVAESLEKRSTLAQERASLTNVLDRANMRVLNAERTFREGGGELFERRERWVRRQTELHAASRHTSDQLRQIA
GRE-LPLLACSALVDQGIDAVRRSDE-AQRLSITIEAIRARDKEYVRILRELQLPASIGKEIAAELAH-TVP----TIPS
NTPPTSFGIR-SERLERYSAAQRKRLNKDVSALLKESEKQKNELAEVDQAIEAVPSEEQIAELTWELKDANAELARVQAA
MANLDDQIER--WNRQIEDARKNLDSALGTRLKQGISNAEAERVVRHIE---LVDRSLQEYLVKMVERHSGDISSKILAS
FRLIARKPELLSGLKIDPHTFHMSLTGNSGKHIDPGELSAGERQILAFAILDGLAKSSGRQIPTLIDSPLGRLDGIHRQR
IAQHYLPSASHQTIVFSTDKEVDEQMLRMLNHN--IAASYLLNFNEKAYGTEI-KNG-YF
>OMNI|NTL01HC6739/1-660
MILKSLYLQNFGVFQGSFDDNHVDLEPRVKYNRKRPIILFGGLNGAGKTTTLTAIRLALYGKQSLGRSVSVQIYHQFLVD
AIHKPKGKVLAPNTAGIKLDFNFGRQGEVIDYTVERV-WTVRGKSVFENVEIYQND------------EHLKSLTDH---
-QKQAFLNELIPIGVADLFFFDGEKIADLAEDNNNSA-LADAINRLLGLDIIDRLKADLGVYLRDRKRDKLPSA---IQK
EMEALENSYKSLYSKYQSQLADIEALRIESTELETTKERLNQIINDLGGAWASNRQEAETKEKMLRAKRNELQVQIRNLI
ADA-APLALATNQIAALLKQLTDEQQ-SKRQLVLQVELRKQLNKIQSALIK-SLGKEHKKAIETSIEE-SLPAAT-SIDT
NIIHDISDSE-FNRLNHLITKVVPEQQAKVKALSSELEEVEEELAHVGLNISRAPDERRISNFVSELGEIENSLGQRQVE
IKQRTEAAKAT-LREAMDSLRKL-----REKEKEFGNVTNLDQAVTLAD---RTRGLLESFSSKSRETRINTLEQEFIKS
FAKLARKDDLMITAKIDPETFSVSLIDGTGHIIDKKKLSAGEKQIYAIAMLEALGRTSGRNLPIIIDTPLGRLDSHHREN
LVKNYFPTASHQVLILSTDTEVDEDFYKELSPE--ISHAFEVAYDPEAGSSVY-YEG-YF
>OMNI|NTL02AV2210/1-661
MIFLELVLQNFGPYVGR---QVINLDPRTE-DNPHPIILLGGMNGGGKTTLMDSIRLALYGQRAQCSTRGNLSYGDFLTQ
CVNSQANP---TEKTRVELLFEHIEDDKPIKYRIVRT-WEKNPKDGKDALGILGDD----------DTWPVDSLVNI---
-WDD-YIENLLPLGISNLFLFDGEQVKELAEQDTPPQIVIEAIRGLLGLELADRLAVDLEILVNRKRKELAENK---DLE
ELEEIEKRLKSQQEDYQVIAEKLAAFKNEIEELETIQREALDKFVSEGGKIAAERNQLEQQQKEKSTAAENIRQSMCELA
AEV-LPLALIPNLLSQVQTQGAKEFR-YQQIQLARDVLLERDKRLLQWLNKLAIGSEQVDKIQSFLVEDVDNLYTGYAQK
ELPWLLADEESLSQLDNSIYHLKNAKVLAKQQLAN-LKSIEEELIVLARQVQTAAEPEAYQKLRETVEEAQNQVVQSKAN
YETTRRTLSE--LADSIEQTKKEL----KEYTDKNIDTKNRGHIITSAA---KVQETLKIFREKLTLRKLNKLEEEVKNC
FLYLLHKSDLVYRLTIDTKTFALSLFDFDGKRVPKHRLSAGEKQLLAIAFLWGLAKVSGLRLPVAIDTPLGRLDSSHRQN
LVEKYFPSASHQVILLSTDTEIGKKEVETLRSNEAIAREYLLQYNSKTRQTTV-IENKYF
>OMNI|NTL06SA2932/1-666
MLLRKITLEEFGAYRGK---QSLDLTPKKN----KPIILIGGLNGCGKTTLLDAIQLVLYGNRARCSGRGTKAYETYLRE
SINRKADP---SRGSAITLEFTVMTGGHEHYYRLVRS-WHISGKTLKEFLNVYVDETYGERVKAQRSAEPEGKFNRLLSE
GWAD-HVESLLPLEIASLAFFDGEKIESLANPERAASVIESAVHSLLGVSTVQQLRNDLLALQRRQKLSEEEQH---LLD
NIRAQEAEREAVVSQYDIAHQELAHSRSELGKAQRKLDSLEKAFADEGGDLFTRRVELENDRKQALVRLAQVRTELTQLA
AGP-LPLLMVAPLLDDVRQQARIEQE-AQQSAQVLEVLEERDRWLLELMPD-ATRAEVLKRLDDDRAE-RAA----KTQL
AVDLRLPHDA-LAQLTVLDELLQRDTQ-RSAQLLHSAAELAEHLDQLDRQLAGVPAQDKVEALQAARGEQIVEVTRCETT
RDRATAKLED--LKRRREHVTTLLERAHKEFVRTKVKAEEVERVIKYSE---KARDTLERFGSALLERHISRLEVAVLQS
FKVLMRKQGLVRDLRIDTDKFILTLADADGEAIDPARLSAGERQLLAVSLLWGLMRVAGNRLPSVIDTPLGRLDSRHREH
LVDRYFPNASDQVLLLSTDEEIDEYLLGRLEKS--VAHTYTLVHDDTEFTTAV-VEG-YW
>OMNI|NTL02PHA0094/1-652
MIIKQLTLENFGIYQGR---HEVNLSTSAN----KPIILFGGLNGGGKTTFLDALQLVLYGKHAKCSNRGHQSYGNYLIS
TKNRYVGN---DDTVEISLTFTHTTDTTTNEFVIVRS-WKTNTKDVKDKVVVYCNQ------------QEDSHLSQY---
-WDE-FVNEFIPLSLSDLFFFDGEKIENLAHPDRSADLIKTGIENLLGLDLLSQLQIDLNNVERKRKSENLDTT---VVA
KVEALEAEITEQTTIVTGFKTDIANLEKRASDTNLSINKARQKVRSAGAHLIEERDIIKFELGAIEEKLKANLAERVKLD
AGC-GPLGLIPNLISSTKAQIKKEEQ-AVQANVIQSAITEYEATITQTLVNENVPETALSALSNKMAT-LAKE---REEL
ASTECYIASN-IAIFNGLDEKIANDKL-ERSNLLKARVELFEQQALFNKKLESIPDYETVQHLLSELAGLEVELKNSFVL
IKQKQQLLQQAQARDEVLNTRYA-----NLLTQQSKDTFEQKRSIQVADHIGKLKNTMKSFADELIRENVTGLEEHIAAK
FFDLSRKNNLITGVKICPDSFKLTLLDNNKNPMSPSRLSAGERQLLAIAILWGLAEASGKEIPTVIDTPLGRLDGKHRSK
LINNYFPKASSQVILLSTDEEITGQYYTQLKPA--ICREYHISYNEHEQTSTF-TEG-YF
>OMNI|NTL02PF0739/4-655
LSINQISIENLGPFRER---QNFDLSVMPG----RPVILLKALNGSGKTTLLTALQIGLYGYKAINIARRTE-YEQLIAG
LQRTDA-----TGPARIEMHLSVEVGHYIQELTLRRE-WHPKEKGFGEQFRVFAGH------------MEDLALAED---
-WDE-FINGILPVELVHLFFFDGEKIEALANPERLPALLRRATEVFLGLGGIDALAGDLKAVERRANKKVLPTDCAGNHS
QTSEYELELKQLEQRIEMLSQRQAHARTNLDEAQRKLESFSIEAQRSGLDAYQQAAQLRVRLALCEQEYGRARALLVTAL
EDPILPLTWLGPLWESYKAYWQKDHQ-SKHNDLIVEEFAKRDQRILERL---ALDAPHVISIAAELFA-ADLKGLRVDKS
HIPILLSGGD-PTEIEAQFQQAKRRLRDAKEIVATAQRTMEKAQDAVHQ----IPAHEQLSTVFEAMQQHTRGVSAAELQ
LHELSRELEEARNKQAHFELRYQAASA-RARAELKENAFHL-KALEAAD---RAKVVLGLFRERLLASKAQWLSEMITTE
FKQLLRKRNLISRVLVEAETYAVSIEDVNGYTLPMERLSAGERQILAIAVLSALIRERKGRFPVIVDTPLARLDRSHREA
LVHNFFAKISHQVMVLSTDEEVEGTVHMALEQH--MSREYSLMFDDESRRSVVSINTQQF
>OMNI|NTL02BC0817/1-655
MLIEQLELENIGAYTER---NTFDLSISSP---KKKVILIGGENGAGKTTFLNSIKLGLFGCFGYGYKTENNDYYKRVHG
YLNASARK-DETNPFSITITFSEVENYKRHVYTFKRS-WNILNSAIKEKFTVKKDG---------------HYLNDAEKD
IFES-RLRENFPPKLFDLCLFDGEEISKIINENKLSSYLKELSTVIFNLDLFRNLEGDLTNYLQQEIDQEHLSS---IES
EILTLQRQEKEQSLKIEDLEDTIKTAQQQIEESKESYSLLKKDFETHGGLIKEERETLNRQVLEIEAHRKANSEKVREFI
QTL-LPFYLNKNLLLSTKNQLQNEEKLSLANQLTSELTEERALELAKSLPGVSAPNDLAAELRKQIFN-IIKPN--DTDV
EYIHRVSPTQ-RTQFEVAAQQVERESHDTYMQLLQENRENLLQAQELRKKISTNDSTNEFAQMLETMTQTQEKIFKLEKE
VEENLSILET--RQETLEALKNTI----DSKQNIVQQSNKTRNTFLIAQ---SIMKLSTEFQMLQHQKKLQQVQIEATKM
LNKLMRKHQYISSLRIDSSTFEVTLYDNNRDHVAKETLSAGEKEILLLSLIWAMFKCSGRRVPFIFDTLLGRLDQTHKHN
ILVDFIPACGEQVLILSTNSEVDEKHYNLLKNF--VSHGYLLEFDTELRKVNV-TDQ-YF