HMM Seed Alignment: TIGR03388
Download Alignment>GB|AAY47050.1/35-572
IRHYQWEVKYEYKSPDCFKKPSISINGKTPGPTIVAQQGDTVVVEVKNSLLTENLAIHWHGIRQIGTPWADGTEGVTQCP
IVPGDTFIYKFVVDRAGTYLYHAHYGMQRQAGLQGMMRVSLP-----DGVLEPFSYDHDRSILLTDWYHKSTYEQATGLA
SLPFSWVGEPQSILIHGRGRF-NCSI-----PTIDPTLCNAT-NPQCTPYSMTVVPGKTYRLRIGSLTALSALSFEIEGH
NMTVVEADGHYVEPFVVKNLFIYSGETYSVLIKA-DQDPTRNYWASTKVVSRNNTTPNGLGIFNYYP---NHPRRYPPTV
PP--SGPRWDDVAPRMAQSVAIKSHRDFIHAPPLTSDRVIVMLNTQNRVN-GYVRWSVNNVSFNMPHTPYLIALKHNLLH
AFEQTP-PPDNY-DQKNYDIFNIAPNVNATTSNSIYRLKFNTTVDIILQNANTMNLNNSETHPWHLHGHDFWVMGYGNGK
FNQSI-DPKNYNFVNPIMKNTIPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEEGIEKVGK--LPTSIMGCG
ES
>GB|BAB86897.1/25-561
IRHHKWEVKYEFRSPDCFKKLVITINGKTPGPTIQAQEGDTIVVQVNNSLVTENLSIHWHGIRQIGTPWFDGTEGVTQCP
ILPGDTFIYQFVVDRPGTYLYHAHYGMQREAGLYGMIRVAPR-------DPEPFAYDLDRSIILNDWYHKSTYEQAAGLS
SIPFQWVGEPQSLLIHGKGRF-NCSKS----PSVSTDVCDTS-NPQCSPFVQTVIPGKTYRLRIASLTALSALSFEIEGH
NMTVVEADGHYVEPFEVKNLFIYSGETYSVLVKT-DQDPSRNYWITSNVVSRNRTTPPGLGMFNYYP---NHPKRSPPTV
PP--SPPAWDDVEPRLAQSLSIKARQGYILKPPTTSDRVIVLLNTQNNIS-EYRHWSVNNVSFTLPHTPYLISLKENITG
AFDPTP-PPDGY-DFANYDIFSVASNANATSSSGIYRLKFNTTVDIILQNANTMNKNNSETHPWHLHGHDFWVLGYGKGK
FDVNN-DTKKYNLENPIMKNTVPVHPFGWTALRFRTDNPGVWAFHCHIESHFYMGMGVVFEEGIERVGK--LPSSIMGCG
QT
>RF|NP_195693.1/35-580
IRRFKWEVKYEFKSPDCFEKLVITINGKFPGPTIKAQQGDTIVVELKNSFMTENVAVHWHGIRQIGTPWFDGVEGVTQCP
ILPGEVFIYQFVVDRPGTYMYHSHYGMQRESGLIGMIQVSPP-----ATEPEPFTYDYDRNFLLTDWYHKSMSEKATGLA
SIPFKWVGEPQSLMIQGRGRF-NCSNNLTTPPSLVSGVCNVS-NADCSRFILTVIPGKTYRLRIGSLTALSALSFQIEGH
NLTVVEADGHYVEPFTVKNLFVYSGETYSVLLKA-DQNPRRNYWITSSIVSRPATTPPATAVLNYYP---NHPRRRPPTS
ESSNIVPEWNDTRSRLAQSLAIKARRGFIHALPENSDKVIVLLNTQNEVN-GYRRWSVNNVSYHHPKTPYLIALKQNLTN
AFDWRFTAPENY-DSRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVLGYGEGK
FNESE-DPKRYNRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSS--LPSSIMGCG
QT
>GB|BAD33459.1/25-572
TRRHDWDISYQFTSPDCVRKLAVTINGHTPGPTIRAVQGDTIVVNVKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCP
ILPGDTFAYTFVVDRPGTYMYHAHYGMQRSAGLNGMIVVEVAPGAAGDGEREPFRYDGEHTVLLNDWWHRSTYEQAAGLA
SVPMVWVGEPQSLLINGRGRFVNCSS-----SPATAASCNVS-HPDCAPAVFAVVPGKTYRFRVASVTSLSALNFEIEGH
EMTVVEADGHYVKPFVVKNLNIYSGETYSVLITA-DQDPNRNYWLASNVVSRKPATPTGTAVLAYYGGRRNSPRARPPTP
PP--AGPAWNDTAYRVRQSLATVAHPAHAVPPPPTSDRTILLLNTQNKIG-GQIKWALNNVSFTLPHTPYLVAMKRGLLG
AFDQRP-PPETYAGAAAFDVYAVQGNPNATTSDAPYRLRFGSVVDVVLQNANMLAANSSETHPWHLHGHDFWVLGHGAGR
FDPAV-HPAAYNLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGE--LPPEIMGCG
KT
>SP|P24792/33-571
IRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCA
INPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPP-----QGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLS
SKPIRWIGEPQTILLNGRGQF-DCSIAAKY--DSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNH
PLLVVEADGNYVQPFYTSDIDIYSGESYSVLITT-DQNPSENYWVSVGTRGRHPNTPPGLTLLNYLP---NSVSKLPTSP
PP--ETPAWDDFDRSKNFTYRITAAMG-SPKPPVKSNRRIFLLNTQNVIN-GYVKWAINDVSLALPPTPYLGAMKFNLLH
AFDQNP-PPEVF--PEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGK
FTAE--EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGR--IPTKALACG
GT
>SP|Q40588/30-568
TRHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIRQIGTPWADGTAAISQCA
INPGETFLYRFKVDKAGTYFYHGHYGMQRSAGLYGSLIVEVG-----EGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDLS
SNPLRWIGEPQTLLLNGRGQY-NCSLAARF-SKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGH
KMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKT-DQDPTKNYWISINVRGREPKTPQGLTLLNYLP---NSASKFPTLP
PP--IAPLWNDYNHSKSFSNKIFALMG-SPKPPPQNHRRIILLNTQNKID-GYTKWAINNVSLVLPTQLYLGSIRYGI-N
AFDTKP-PPDNF--PKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGK
FSEK--DVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKK--IPKEALACG
LT
>GB|CAA75577.1/25-565
KSHYKFDVEYIYKKPDCKEHVVMGINGQFPGPTIRAEVGDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCA
INPGETFQYKFKVDRPGTYFYHGHYGMQRAAGLYGSLIVDLP-----KSQREPFHYDGEFNLLLSDLWHTSSHEQEVGLS
SAPMRWIGEPQNLLINGRRQF-HCSLASKY-GSTNLPQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNH
KLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTT-DQDPKKNYWLSIGVRGRKPSTPQALTILNYKP---LSASVFPTSP
PP--VTPLWNDTDHSKAFTKQIISKMG-NPQPPKSSHRSIHFLNTQNKIG-SFTKWAINNVSLTLPTTPYLGSIKFNLKN
TFDKNP-PPERF--PMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGR
FRPGV-DERSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRN--IPKEALKCV
LQ
>RF|NP_001057898.1/26-569
ARHFRWEVSNMFWSPDCEEKVVIGINGQFPGPTIRAKAGDTIVVHLKNGLHTEGVVIHWHGIRQIGTPWADGTASISQCA
INPEETFTYRFVVDKPGTYFYHGHYGMQRAAGLYGSLIVDVA-----DGDEEPFKYDGEINLLLSDWYHESIYTQMVGLS
SNPFRWIGEPQSLLINGRGQF-NCSLAAA--HTPGAKQCAAAGNRHCAPVILPVLPNKTYRLRVASTTSLASLNLAVGNH
KLTVVEADGNYVEPFAVDDIDIYSGDSYSVLLTT-DQDTSANYWVSVGVRGRQPRTAPALAVLNYRP---NRASRLPAAA
PP--ATPAWDDFARSKAFTYRILGRAGVTPPPPATSDRRIELLNTQNRMGGGHVKWSINNVSMVLPATPYLGSLKMGLRS
ALPSAARPSDTF--GRGYDVMRPPANPNTTVGDNVYVLAHNATVDVVLQNANALARNVSEVHPWHLHGHDFWVLGYGDGA
FRGDAGDAAALNLRNPPLRNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDRVSE--LPKAAVSCG
AT
>GB|BAA20519.1/16-557
VREYHWEVEYKYWSPDCKEGAVMTVNGEFPGPTIKAFAGDTIVVNLTNKLTTEGLVIHWHGIRQFGSPWADGAAGVTQCA
INPGETFTYNFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVA-----KGKSERLRYDGEFNLLLSDWWHEAIPSQELGLS
SKPMRWIGEAQSILINGRGQF-NCSLAAQFSNNTSLPMCTFKEGDQCAPQILHVEPNKTYRIRLSSTTALASLNLAVQGH
KLVVVEADGNYITPFTTDDIDIYSGESYSVLLTT-DQDPSHNYYISVGVRGRKPNTTQALTILNYVT---APASKLPSSP
PP--VTPRWDDFERSKNFSKKIFSAMG-SPSPPKKYRKRLILLNTQNLID-GYTKWAINNVSLVTPATPYLGSVKYNLKL
GFNRKS-PPRSY--RMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFWVLGYGDGK
FKPGI-DEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGK--VPDEALGCG
LT
>GB|AAF20931.1/24-564
VVELNWEVEYKLGWPDCKEGIVIAINGEFPGPTINAVAGDTVIVHVTNKLSTEGVVIHWHGIRQNGTPWADGAAGVTQCP
INPGETLTYNFIVDKAGTHFYHGHYGMQRSAGLYGMMIVRSP--------KETLQYDGEFNLLLSDWWHQSSHAQELYLS
SRPMRWIGEPQSLLINGRGQF-NCSLAAYF-NKGGLKECKFKENDECAPSILRVEPNKVYRLRIASTTALASLNFAVEGH
QLEVVEADGNYIAPFTVDDIDLYSGETYSVLLRTHNPTPSRNYWISVGVRGRKPNTTQALTVLHYAG---APEFEHLPHP
PP--VTPRWDDYDRSKSFTNKIFAAKG-YPPPPEKSDEQLFLLNTQNLMD-KYTKWAINNVSLSVPATPYIGTIRYGLKT
LNYQKP-PGKEI--MRDYDITKPPVNPNTTKGSGIYNLQSGRVVDVILQNANVLKGRGSEIHPWHLHGHDFWVLGYGEGK
FRLGV-DEKTYNLKNPPLRNTVALYPYGWTALRFLTDNPGVWFFHCHIEPHLHMGMGVVFAEGVDKIAKMNIPDQVLGCG
ST