HMM Seed Alignment: TIGR03389
Download Alignment>GB|AAK37829.1|13661207/24-555
AETRHYKFDIKFKNVTRLCHTEPIVTANGKFPGPTIHAREGDTVTVKVTNHVTYNVSIHWHGIRQLRTGWADGPAYITQC
PIQTGQTFVYNFTITGQRGTLFWHAHILWLRATLYGPIVILPPKG-PYPFPKPHKEVILILGEWWNS-DTETVINQAMNS
GLAPNSSDSHTINGKAGPLFYCPT-KDTFALSVEPDKTYLLRIIKA-LNQEVFFGVANHHLTVVEVDAVYTKPFETKAIV
SAPGQTTNALLHTDKK--A-GRYFMAARVFMDAPIA-VDNKTATAILQYTG-SSNSLNPVM-----PLIPALNDTAFSSN
FSNALKSLNSPQYPAKVPQSIDRNLFFTVGLALNACP-----T-CI--NGARPAASVNNISFTMP-TIALLQSHYFN-IS
GVFTTDFPDNPPATFNYTGTP-PKNLQSSN-GTRLSRIPFNSTVQLVLQDTSALTVE-NHPVHLHGFNFFIVGRGFGNYN
-PKKDPA-KFNLVDPPERNTVGVPTGGWTVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGHGPEQSILPPGKDLPQ
C
>RF|NP_195946.2|22326581/23-557
AAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVQYNMSIHWHGLKQYRNGWADGPAYITQC
PIQTGQSYLYDFNVTGQRGTLWWHAHILWLRATVYGAIVILPAPGKPYPFPQPYQESNIILGEWWNK-DVETAVNQANQL
GAPPPMSDAHTINGKPGPLFPCSE-KHTFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAIL
LGPGQTTNVLVKTDRS--P-NRYFMAASPFMDAPVS-VDNKTVTAILQYKG-VPNTVLPIL-----PKLPLPNDTSFALD
YNGKLKSLNTPNFPALVPLKVDRRLFYTIGLGINACP-----T-CV--NGTNLAASINNITFIMP-KTALLKAHYSN-IS
GVFRTDFPDRPPKAFNYTGVPLTANLGTST-GTRLSRVKFNTTIELVLQDTNLLTVE-SHPFHLHGYNFFVVGTGVGNFD
-PKKDPA-KFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVVENGETPELSVLPPPKDYPS
C
>GB|AAC49536.1|1685087|NTU43542/22-557
CRIRHYKFNVVMKNTTRLCSSKPIVTVNGKFPGPTIYAREGDTVLVKVVNHVKYNLSIHWHGIRQLRTGWADGPAYITQC
PIQPGQNYVYNFTITGQRGTLFWHAHILWLRATVHGAIVILPNLGVPYPFPKPNHEAVVILAEWWKS-DTEAVINEAIKS
GLAPNVSDAHTINGHPGPVSNCAS-QGGYKLNVDPGKTYMLRVINAALNEELFFKIAGHKMTVVEVDATYIKPFKTDTIV
IAPGQTTNVIVTANQG--S-GKYMVAASPFMDAPIA-VDNVTAIATLHYSG-TQGNSHISL-----TSTPPKNATPVANT
FLDSLRSLNSKKYPAKVPKKIDHSLFFTVGLGINPCP-----T-CKQGNGSRVVASVNNVTFVMP-TVALLQAHFFG-TK
GVFTTDFPANPPFAFNYTGTG-PTNLATMN-GTKVYRLRYNDTVQLVLQDTGIIAPE-NHPIHLHGFNFFLVGKGIGNFN
-PKTDPK-NFNLVDPVERNTVGVPAGGWVAIRFRADNPGVWFMHCHLEIHTTWGLKMAWLVDNGKGPNESLLPPPKDLPK
C
>GB|CAA74103.1|3805960|Y13771/22-555
CKVRLYNFRVVLTNTTKLCSSKSIPTINGKFPGPTIYAREGDNVNIRLTNQVQYNVTVHWHGVSSCFTGWADGPAYITQC
PIQPGQSYLYNFTLTGQRGTLLWHAHISWLRATIHGAIVIFPKKGVPYPFPKPDKEKIIILSEWWKA-DVEAVVNQATMT
GLPPNISDAHTVNGHTGAVPGCTS-PG-FTLHVESGKTYLLRIINAALNDELFFKIAGHNITVVEVDATFTKPFSTDTIF
IGPGQTTNALLTADKS--I-GKYLIAVSPFMDTVVA-VDNVTAIAFLRYNE-PLHSPHLSL-----TTTPAINATPATST
FMDKLRSLNSKKYPANVPLTVDHDLYFTIGVGIDPCA-----T-CT--NGSKAVADINNVSFIMP-TTALLQAHYYN-IS
GVFTDDFPAKPPISFNYTGNNTAMNLKTTN-GTRAYRLAFNSAVQVVLQGTTIIAPE-SHPFHLHGFNFFVVGKGIGNFD
-PDNDPK-KFNLADPVERNTVSVPTAGWIAIRFKADNPGVWFLHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPT
C
>GB|AAB17191.1|1621461|LTU73103/24-570
GSTWHYKFDVQLKSVKRLCNRKSILTVNGRFPGPKLVAREGDRVVVEVVNNVQNNVTVHWHGIRQLQNGWADGPSYITQC
PIQTGQTYVYNFTIVGQRGTLFWHAHFSWLRATLYGPLIVLPMQNATYPFGKPDKEVPIIFGEWWNA-NTEAVINQSLQT
GAGPNVSDAYTINGMPGPLYNCSA-KDTFKLKVKPGKTYLLRLINAALNDELFFGIASHTITVVEVDATYVKPFNMKILL
IGPGQTTNVLLKAKPYY-PNATFFMSARPYATGLGT-FDNTTTVGLLEYQR-PNSSLSSTKLQIFKASLPALNDTAYAAK
YSQRLRSLANAQFPANVPQTVDKHFFFTIGLSADPCPK--NQT-CQGPNGTKFSASMNNISFVLP-TTALLQAHFFGQSN
GVYNTTFPNNPLFPFNYTGTP-PNNTFVSH-GTKVVVIPFNTSVEVVLQNTSILGME-SHLLHLHGYNFFVVGQGFGNFD
-PDKDPA-KFNLVDPIERNTVGVPSGGWAAIRFRADNPGVWFMHCHFDVHLSWGLKMAWVVLDGKLPNQKLLPPPSDLPK
C
>GB|CAJ30498.1|84618777/33-582
ARTRRYTFNVTMATVTRLCVTKSVPTVNGQFPGPRLVVREGDRLVVQVHNNINSNVTFHWHGVRQLRSGWADGPSYITQC
PIRPGQSYAYDFRIVGQRGTLWWHAHFSWLRATLYGPLVILPPRGVPYPFPKPDRQVTLMLGEWFNA-DPEAVIKQALQT
GGAPNVSDAYTFNGLPGPTYNCSSGDDTFRLRVRPGRTYLLRLVNAALNDELFFAVANHTLTVVQADASYVKPFAAATLV
ISPGQTMDVLLTASASAAPSSAFAIAVAPYTNTVGT-FDNTTAVAVVEYGP-HQSAAALRSLPL--PALPRYNDTAAVAN
FSAMFRSLASARYPARVPRTVDRRFFFTVGLGADPCRSRVNGT-CQGPNGTRFAASMNNVSFAMPRTTSLLQAHYQRRYS
GVLAANFPAVPPTRFDYTGAP-PNNTFVTH-GTRVVPLSFNTTVEVVLQDTSVLGAE-SHPLHLHGYDFFVVGTGFGNYD
-ATNDTA-RYNLVDPVQRNTVSVPTAGWVAIRFVADNPGVWIMHCHLDVHLTWGLAMAWLVNDGPLPNQKLPPPPSDIPR
C
>RF|NP_196158.1|15239103/24-565
AKVQHHDFVIQETPVKRLCKTRNAITVNGMFPGPTLEVNNGDTLEVKVHNRARYNITIHWHGVRQIRTGWADGPEFVTQC
PIRPGKSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNA-NPVDVINQATRT
GAAPNISDAYTINGQPGDLYNCST-KETVVVPINSGETSLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLM
LGPGQTTDVLLTADQP--P-KRYYIAARAYQSAQNAPFDNTTTTAILQYKK-TTTTSKPIM-----PVLPAFNDTNTVTS
FSRKFKSLR----NVVVPKTIDDNLFFTIGLGLDNCPKKFPKSRCQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNG-IP
GVFTTDFPSKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSE-NHPIHLHGYDFYIVGEGFGNFN
-PKKDTS-KFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHIKWGLAMAFLVDNGVGELETLEAPPHDLPI
C
>GB|ABE66147.1|91806840/33-569
AEIHHHTFKIKSKAYTRLCNTNKILTVNGEFPGPTLKAYRGDKLIVNVINNANYNITLHWHGARQIRNPWSDGPEYVTQC
PIRPGESYVYRIDLKVEEGTIWWHAHSQWARATVHGAFIVYPKRGSSYPFPKPHREIPLILGEWWKKENIMHIPGKANKT
GGEPAISDSYTINGQPGYLYPCSK-PETFKITVVRGRRYLLRIINAVMDEELFFAIANHTLTVVAKDGFYLKHFKSDYLM
ITPGQSMDVLLHANQR--P-NHYFVAARAYSSAFGAGFDKTTTTAILQYKGDTLNRIKPIL-----PYLPPYNRTEASTR
FTNQFRSQR----PVNVPVKINTRLLYAISVNLMNCS---DDRPCTGPFGKRFSSSINNISFVNP-SVDILRAYYRH-IG
GVFQEDFPRNPPTKFNYTGENLP---FPTRFGTKVVVLDYNSSVELILQGTNVLASD-NHPIHLHGYNFYVVGSGFGNFD
-RRKDPL-RYNLVDPPEETTVGVPRNGWTAVRFVANNPGVWLLHCHIERHATWGMNTVFIVKDGPTKSSRMVKPPPDLPS
C
>RF|NP_199621.2|30695378/19-563
CIAHHYTFTVREVPYTKLCSTKAILTVNSQFPGPIIKVHKGDTIYVNVQNRASENITMHWHGVEQPRNPWSDGPEYITQC
PIRPGSDFLYKVIFSIEDTTVWWHAHSSWTRATVHGLIFVYPRPPQILPFPKADHEVPIILGEWWKR-DVREVVEEFVRT
GGAPNVSDALTINGHPGFLYPCSK-SDTFHLTVEKGKTYRIRMVNAAMNLPLFFAIANHSLTVVSADGHYIKPIKATYIT
ISPGETLDMLLHADQD--PERTYYMAARAYQSGNID-FNNSTTIGILSYT--SSCKAKTSSFSGYYPTLPFYNDTSAAFG
FFTKIKCL----FSGQVPVQISRRIITTVSINLRMCP---QNS-CEGPNGSRLAASMNNISFVTPSHVDILKAYYYH-IK
GVYGTRFPEFPPLIFNFTAENQPLFLETPRLATEVKVIEFGQVVELVIQGTSLVGGGLDHPMHLHGFSFYVVGVGFGNYN
ISEEDPSSRYNLYDPPYKNTMTVPRNGWIAIRFVADNPGVWFMHCHLDRHQTWGMNVVFIVKNGREPNQQILPPPDDLPP
C