HMM Seed Alignment: TIGR03446
Download Alignment>OMNI|MT_1113/4-286
LRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGEILNPAMDLPD-VH--GRIAEIRRDEMTKAAEILGVEH
TWLGFVDSGLPKGDLPPPLPDDCFARVPLEVSTEALVRVVREFRPHVMTTYDENGGYPHPDHIRCHQVSVAAYEAAGDFC
RFPDA--G-----EPWTVSKLYYVHGFLRERMQMLQDEFARHGQRGPFE--Q----WLAYWDPDH--DFLTSRVTTRVEC
SKYFSQRDDALRAHATQIDPNAEFFAAPLAWQERLWPTEEFELARSRIPAR-PPETELFAGI
>OMNI|MSMEG_5261/4-286
LRLMAVHAHPDDESSKGAATTARYAAEGARVMVVTLTGGERGDILNPAMDLPE-VH--GRIAEVRRDEMAKAAEILGVEH
HWLGFVDSGLPEGDPLPPLPDGCFALVPLEEPVKRLVRVIREFRPHVMTTYDENGGYPHPDHIRCHQVSVAAYEAAADHL
LYPDA--G-----EPWAVQKLYYNHGFLRQRMQLLQEEFAKNGQEGPFA--K----WLEHWDPDN--DVFANRVTTRVHC
AEYFHQRDDALRAHATQIDPKGDFFHAPIEWQQRLWPTEEFELARARVPVT-LPEDDLFKGV
>OMNI|NTL05RS5797/4-286
FRLMAVHAHPDDESSKGAATTARYAAEGNEVKVVTLTGGERGDILNPAMDVPG-VR--DRIHEVRIEEMAEAARILGVQH
QWLGFVDSGLPEGDPKPPLPEGCFALVPLEESTEALVRVIREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAYEAAADPE
RFPDA--G-----EPWKVQKVYYSHGFIRKRLLQFQEEYDRRGEEFPMA--E----WLKKWKTEQ--GDLMARVTTQITC
GDYFPQRDDALRAHATQIDPNGSFFAVPLEIQQKIWPTEEFELAKTRVTTS-IPENDLFAGI
>OMNI|NTL02CJ1493/13-298
YRLLAIHAHPDDESSKGAATMARYVDEGHRVKVLTCTGGERGDILNPEMQELA-EQGIGEMIEVRREEMAQAASILGVEH
EWLGYVDSGLPEGDPKPPLPEGCFALEDTDEVTQNVVRVVREFRPHVIITYDEYGGYPHPDHIKVHAVSVRAWEAAGDPN
YHPEL--G-----EPWEVKKLYYTHGFIRERFENLATAMYERGAQLPEQVLQ----HLEMWR-QL--PDIFSRVTTRVNV
ADWFERRDDALRAHRTQIDPKGAFFLADMDLQKQVWPTEEFELAQSRVSSE-LPETELFAGL
>OMNI|NTL02CG0986/7-289
LRLMAIHAHPDDESSKGAATMARYAAEGNQVMVVTCTGGERGDILNPAMDKPG-IL--DNIFAVRQEEMAKAMEILGTEH
RWLGYEDSGLPQGDPLPPLPEGCFALEDSDKVTQDLVKILREFRPHVIITYDENGGYPHPDHLKVHEVSMLAWEKSGDAA
YAPEL--G-----APWEPLKLYYTHGFIRQRMEMFHDLLIEQGKPSPYT--P----MLERWKANE--ADVMARVTTQVPC
ERFFDQRDDALRAHATQIDPAGAFFGTPVEVQRRLWPTEEFELAKTRVKTS-IPEDDLFAGI
>OMNI|NTL01CD0901/8-290
ARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTGGELGDVLNPSLDKTA-VE--GRIAEVRREEMAQAVKELGVQH
RWLGYHDSGFPEGEPHPPVPPGSFALEDSDEVAAKIVEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLAGDPD
YRLDL--G-----QPWAPLKLYYTHGFIRQRMEMFHNLLVEQGKPSPYE--G----ILDRWLEHR--ADIMARVTTQVYA
ADYFDRRDAALKAHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTS-LPEDDLFEGI
>OMNI|NTL01TF0449/5-286
LRLMAVHAHPDDESSKGAATMARYVNEGAEVLVVTLTGGERGSILNPAMDRPE-IR--ENIAEVRRKEMEEARRILGVRQ
VFVGFIDSGLPEGDPPPPLPEGCFALQPLEVAAEPVVRLVREFRPHVMITYDEQGGYPHPDHIMCHKVSVEAFEAAADPE
RYPGT--G-----EPWQTSKLYYHVSFPLERFEAIAKVLSDRGMENPYA--D----WMKRLE-KR--DTRRWEITTRVEC
GEYFEVRDRALLAHATQIDPNSFWFAVPNDIQREAWPTEDYHLARSFVDTE-LPEDDLFAGI
>OMNI|NTL01FS3903/13-300
LRLMAIHAHPDDESSKGAATMARYASEGADVLVVTCTGGEEGSILNPAMDQPG-VA--ARMAEIRRQEMEAARLILGVRQ
EWLGFVDSGLPEGDPPPPVPDGRFATIALGEAARPLVRLIRQFRPQVITTYDESGGYPHPDHIMTHRVSVEAFEAAGDPD
RYPEV--GVDAGLEPWQPLKLYYHLTFHKERVLALHEEMMARGLESPYA--ERLAEWVDR-------AEDTGRLTTQVEC
ADWFETRDRALIAHATQVDPTGWWFRIPLEVQRDAWPTEDYQLARSLIEVGMLPEDDLFNGV
>OMNI|NTL02SC4758/5-289
LRLMAVHAHPDDESSKGAATMAKYVSEGVDVLVVTCTGGERGSILNPKLQGDAYIE--ENIHEVRRKEMDEAREILGVGQ
EWLGFVDSGLPEGDPLPPLPEGCFALEDVDKAAGELVRKIRSFRPQVITTYDENGGYPHPDHIMTHKITMVAFEGAADTE
KYPESEYG-----TAYQPLKVYYNQGFNRPRTEALHHALLDRGLESPYE--D----WLKRWS-EF--ERKERTLTTHVPC
ADFFEIRDKALIAHATQIDPEGGWFRVPMEIQKEVWPTEEYELAKSLVETS-LPEDDLFAGI
>OMNI|NT02AS2937/38-327
LRLLAVHAHPDDESSKGAATMAMYAAAGVDVMVATCTDGSRGDIQNPAMEHEPHPK--RDMAGARRLEMDNAAKVLGIRQ
RWLGFVDSGLPEGDPLPPLPPGSFALQPLEVAAAPLVRLVRDFKPHVIVSYDENGGYPHPDHIMAHRVAVEAFEAAGDPE
RYQGA--G-----EPWAPGKLYYDRAFSPDRFRALHFALEEAGLQSPYA--ERLAAWLEADAEGHTPPPPTHPTTTQIEC
GDYFEARDDALRAHRTQVDPLGFFFAVSPDMQRRAWPWEDYSLIQSRVPVE-LPEKDLFAGL