HMM Seed Alignment: TIGR03466

Download Alignment

>NTL02AB1739_A.bacte/1-328
MKAFVTGATGFVGSHVAELLEAMGAEVRVLTRKTSRSENLEMLKAERIVGDLRDFDSLKKGMAGCEVVFHVAADYRLWTR
NPEEMYASNVEGTRSIIRAAQETGVRRVVYTSSVATMGFGYNGYIVNEA--TPVHAGMMIGHYKKSKFQAEQVALEMAQA
-GADVVIVNPSTPIGERDIKPTPTGQIVVDFLKKKFPAYVDTGLNLVDVRECAQGHINAMER--GRSGERYILGGENLTL
KQILDKLASISGLPSPKVKLPYAVALAAGAVDTVVTGYIRGK--EPRANLDAVRMGRKKMYVSSAKAEADLGYKAGSAND
GLRRAAEWFRAHGYA
>GAC_ATCCORF0841_A.capsu/10-339
VKVLVTGATGFVGSHVAKELAAQGASLRLLVRKTSNLANLEGLNAETVTGDLMEPESLRTAVRGCEALLHVAADYRLWVR
DPKQMYAANVEGTRALLQMAREEGVGRCVYTSSVATMAFREDGTIVDEA--TPVSVDDMVGHYKRSKFLAEQVALEAAAA
-GQAVIVLNPTTPIGPGDIKPTPTGRIVVDFLNRKFPAYMDTGLNLVDVKEVARTHVAALDPAVGRPGERYILGGENLTL
KQILDKMSAITGLPSPTMKVSHGVAMAFAFFDETIQGKLLGR--EPRATVESVRMGRKKMFASSAKAQRELGFRVVPVYE
ALREAIAWFRAHGYA
>GSU_0687_G.sulfu/1-327
MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLDVEICEGDLRDRQALEHGLAGCEVLYHAAADYRLWTR
TPAAMYAANVDGTRNILEAALRRGIARVVYTSSVGTLGNPGNGTPGTET--TPVTFADMVGHYKKSKFLAEREAEAFIAR
-GLPLVIVNPSTPVGPHDVKPTPTGKIIVDFLNRKMPAYLDTGLNIIDVEDCARGHLLAARH--GRIGEKYILGHENLTL
REIFALLARLTGIPAPRVRLPHTPILMAAYVNEALAK-LTGK--EPLIPLAGVQMAKKFMFFESSKATGELGLQRRPAVD
ALRRAVEWFRANGYA
>NT01SU1354_S.usita/65-386
KPALVTGASGFLGWHVARVLVERGLHVRALVRPGSK---VVGIDVECVTGDLRDPASLALAVKGCGLVFHVAADYRLWAK
DPTELYRSNVDGTRNLLEAARQAGVERTVYTSTVGCIGMPRDG-IGDEA--QPVKLAHMAGDYKRSKFLAEKVALEFARA
-GQPVVIVNPTAPLGDHDVKPTPTGKIVLDFLKGDMPAFIDTGLNVVDVRDTAEGHWQACER--GRSGERYILGSENLTL
AQILQKLAAITGRKAPTLQLPYALAYCAGACSTAWAA-VTGR--PPRVPLEAVRMAKKKMWVSHDKAARELGFQPGPAEK
ALRHAVDWFRQTAA-
>NTL03NM2281_N.multi/2-329
TKSLITGANGFVGSAVTRCLLEAGHEVRCLVRPGSDRRNLDKLPVEISEGDLRSASSLKRAVAGCDNLFHVAADYRLWVP
NPDTMYEINVKGTRALVLAAAEAGMKRMVYTSSVATLGTAENGVPADED--TPSSLGSMCGHYKRSKFMAEEIVQQMTRE
HDLPMVIVNPSTPIGPRDIKPTPTGRLVVDTLRNRMPAYVNTGLNIVHADDIAEGHLLAYKH--GKPGERYILGGENMTL
LQILQKIDEIRGRRIRRLGLPVKLMVPAAWLMEKMST-VTKV--EPRATVDSVSMAKKKMFYSSDKAVRELGYRYRPAAA
ALEDAMNWFQANGYC
>NTL01BXA3004_B.xenov/7-334
DLVLVTGASGFVGSSVARIAQQKGFKVRVLVRATSPRQNVESLDAEIVVGDMRDEASMRNALRGVRYLLHVAADYRLWAP
DPSEIERSNLEGTEATMRAALKEGVERIVYTSSVATLKVTSSGQSADET--SPLKADQAIGVYKRSKVLAERAVERMIAE
DNLPAVIVNPSTPIGPRDVKPTPTGRIIVEAALGKIPAFVDTGLNLVHVDDVAAGHFLALER--GKIGERYILGGENLPL
QQMLADIAALTGRKAPTLSLPRWPLYPLAMGAEAIAK-ITKR--EPFVTVDGLKMSKNKMYFTSAKAERELGYRARPYRE
GLGDALEWFRQAGYL
>NTL01NO0999_N.ocean/1-329
MTSFVTGATGFVGSAVVKQLLDAGETVRVLARSNSNRRNLEGLPVEIFEGDLKDQRRLEKALHGCQALFHVAADYRLWAP
RSQDFYDTNVQGSQNIMHAAAEAGVNRIVYTSSVATLGLSPDGTPAHEE--TPSSLETMIGHYKRSKFLAEESIKDLGHR
LKLNIVIVNPSTPIGPRDIKPTPTGRVIVMAASGGMPAYMNTGLNVVHVDDVAAGHLLAFEK--GRIGERYILGGENLTL
RDILEAIAQLTHRRPPRFRLSPHAVLPIAHLAQGWARLTSGK--EPMTTVDGVRMAKKYMFFSSTKAEQLLGYQSRPAQE
AIHDAISWFQANDYL
>NTL02RR0058_R.rubru/1-330
MTVLVTGASGFVGAAVVRALLARGQNVRALVRDTSPRRNLEGLPLETVIGDLTDTASLRAAARGVDALYHVAADYRLWTL
DPPAMFRANVEGSVAVIRAAAEAGAKRIVYTSSVAVIKPKADGTPADET--TPTLASDMIGPYKLSKFEAERAVQRLITN
EGAPVVIVNPSTPIGPRDIKPTPTGRMIVEAALGKMPAYVDTGLNVAHVEDVAEGHLLAFDR--GEIGERYILGGEDMSL
RDILFTIARLTGGKPPRVSLPHGLIVPLAWAVETLAR-LRRSETEPFVTLDGLRMARKHMFFSSAKARTALGYAPRPAEQ
ALADALVWFRANGFL
>NTL01NS4263_N.sp./1-326
MRVFVTGATGFVGANLVRLLLQQGYTVKTLVRPQSNLGNLRGLDVEIVEGDF-DNQFLWQQMSGCRYLFHVAAQYSLWQK
DRDLLYQNNVLGTFQVLEAAQKAGIERTVYTSSVAAIGVNPSGEIADET--YQSPVDKLIGHYKKSKFLAEQEAVQAAAK
-GQDIVIVNPSTPIGPWDIKPTPTGDIILRFLRRQMPAYVNTGLNLIDVRDVAWGHLLALEK--GKSGDRYILGHQNLSL
QQLLEKLAEITGLPAPQWTVPGWLPLSVAWMEEKILA-PLGK--TPSVPIDGVRMAQQTMYYDASKAVKELGLPQSPVDI
ALKDAVNWFVSQGYV
>NTL01GO2188_G.oxyda/11-338
DVTLVTGATGFVGSAVARVLEERGHRLRLLVRPTSDRSNIAELNAELAVGDLSDPDTLAPALKGVKILFHVAADYRLWVP
DPETMMKANVEGTRNLMLAALEAGVEKIIYCSSVAALGLRSDGVPADET--TPVSESQVIGIYKLSKYRAEQEVLRLIRE
KNLPAIIVNPSTPVGPRDIKPTPTGQMILDCASGNMPAYVETGLNIVHVDDVAEGHALALER--GKIGEKYILGGENIML
GDLFRMVSQIAGVKPPAVKLKQSWLYPVALVSEWLAR-GFGI--EPRVTRETLAMSKKLMFFSSDKAKKELGYAPRPARD
AVTDAIAWFRQHGRM
>AFE_0973_A.ferro/1-329
MKALLTGASGFVGGAVLRRLLAEGLEIRVLHRTGADPANWEGLDVELVVGDLTDGPALDSAVAGCQAVFHVAADYRLWVP
DPRAMYAANVGGSERLVRAALDAGVERIVYTSSVAVLGHYADGREADED--TTAQLEDMIGHYKRSKYLAEEALRALCRE
EGAPIVIVNPSTPIGPADRKPTPTGRMVRDAAAGRMPAYVDTGLNVVHVDDVAMGHWQAFTD--GEVGERYILGGDNLPL
AAILTRIAGLTGHRSPWLRIPRRLLYPLAWGAERVVR-LRGRG-TPLVTVDELRMAAHKMYFSSAKAERVLHYTHRPAEE
ALRDAVRWFAEHHYL
>NTL06MM1364_M.magne/3-329
GPVLVTGATGFVGAAIVRALLARGEAVRVLARPASDRRNVANLHVEVAEGRLEDAASLRKAMAGCRVLIHTAADYRIWVP
DPAAMMKANVEGTRTLMEAALAEKVERVVYTSSVATLG-HVEGGVADED--TPSDISDKVGPYKQSKFLAEEVVRRMVAE
QGLPAVICSPSTPIGPGDVKPTPTGRMIVEAASGRMPAYVDTGLNIVHVDDVAAGHLLALDK--GRIGERYILGGENLTL
ADILNRIAKITGGRPPLMKLPRWPLYPLALGAETWAR-FFGG--EPFVTVDGLKMSRWHMFFSSAKAERELGYRHRPADE
ALDAAVEWFKSIGEV
>NTL01GV1747_G.viola/3-327
LRVFVTGGTGFVGANLVRLLLTEGYSVRALVREPAKAQDLAALGAEVVAGDLGSRA-LAGQMAGCRALFHVAAHYSLLQA
DRERLWQSNVLGTRNVLAAAREAGVERTVYTSSVAAIGVKSP--RADEN--HQSPPDKLVGVYKQSKYWAEQEARRAAAR
-GQDVVIVNPTAPVGPFDSKPTPTGDIVLRFLRRQMPFYLETGLNFVHVRDVVQGHLAALER--GRSGERYILGHRDLSF
KALLDTLAEVTGIPAPQMAVPDWLPLGVAWIDEQLLSPLLGR--PPSVPIDGVRMAAQPMYYDASKAVRELGLPQTPVRE
ALVDAVDWFRKNGYI
>NTL01ZM0867_Z.mobil/19-345
KPVLVTGVSGFVGSAVARSLAQQGYKVRGMVRATSPKTNIRDFPGEIVFGDLDDPPSLREPLSGCGALIHVAADYRLWAA
DPNEIIRHNRLHTQAIMTAALYLGIERVIYTSSVATLA-PGHGKPSDEN--SPLMPENAIGAYKRSKVEAERLVEKMIAE
QGLPAVIVNPSTPIGPRDVKPTPTGRIIIEAATGKMPAYVNTGLNLAHVDDVADGHVKALEK--GVIGERYILGGADVPL
SVMLAEIARQVGRKPPKVALPRWPLFPLAWGAEAFAK-ITKK--EPFITSDALRMAGYHMYFSSEKAKRDLGYKSRPWQH
AISDAIEWFRAEGML
>NTL01NE1170_N.europ/6-331
GCSLVTGGGGFIGTHLVRLLLEQGERVRVLELDDVPVLD----GAEVIRGSVADEAVVHRAVKGVRRVYHLAAHTDLWAP
DKRIFRQINYESTRTVLREAMYADVEVVVHTSTEAILTGRGDPDQSDRTLSSSSRKRKTLGPYCQAKLMAEQAALEASRN
-GLSVVVVSPTLPVGPGDRHITPPTRMIVDFLNRKIPAYLDCRLNLVDVRDVAEGHILAAQR--GRSGERYLLGHENIML
SRLLLMLKEITGVVMPEHKIPYWLALVVGILQEFVADHVTHK--APMAPLTGVRLAGRGNDFDSDKAVRELGFRQTPIRQ
ALIDEIIWLVETGHI