HMM Seed Alignment: TIGR03588
Download Alignment>NTL01CJ01236_C.jejun/1-367
MLTYSHQNIDQSDIDTLTKALKDEILTGGKKVNEFEEALCEYMGVKHACVLNSATSALHLAYTAL---------------
--GVQEKI-----VLTTPLTFAATANAALMAGAKVEFIDI-KNDGNIDEKKLEARLLKES---ENIGAISVVDFAGNSVE
MDEISNLTKKYNIPLIDDASHALG--ALY-KS--EKVGK--KADLSIFSFHPVKPITTFEGGAVVSDNEELIDKIKLLRS
HGIVKKR-----------------LWDSDMVELGYNYRLSDVACALGINQLKKLDHNLEKREEIANFYDKEFEKNP--YF
STIKIKDYKKSSRHLYPILLFPE-FYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKK--LLGEIK--LQNADNFYKAEL
SIPCHQEMNLKDAKFVKDTLFSIL
>NTL01WS1000_W.succi/1-365
MLPYSRQSISPEDIQVVIEALNSSFLTQGPRVEAFEEALADCTGAKYALALNSATSALYCAYAAA---------------
--GIKEGDE----VITTPISFVATSNMLLALGAKPIFCDV-KEDGNIDESLIPSLIT------PKTRAIVSVDYSGNPVA
FDRIASIAKTHGLAFISDSSHAIG--AEF-GG--KRVGV--WADATVFSFHAIKPITTGEGGALVTDDEAIYERAKLLRS
HGVEKKR-----------------LWNSDVHSWGFNFRMSDFAAALGTSQLKRLSSFIKRREEIALFYDDSFKESP--YF
TTLSRSKEGKSSHHLYPIFLKQE-FWCPKEEIFTALQEHGLGVQVHYKPIHTFSLYDT--PRDSLF--LPKAESFYLSEI
SIPCHQEMGLKEAKEVVETLSKVF
>NTL02HP0197_H.hepat/1-391
MIPYSTQYIEQDDIEAVNFALESSHLTQGALTQEFEATLASKIGVQYAISFNSATSALFALYGAFMYKYFPHLAHFYNTL
DSKISKQDKEEIYFITTPISFVATTNMMLQWGITPLFCDV-KDDGNIDEKALEHILSTHPKR-AHIKAIVSVDYGGKSVE
ISSLRSLAQKHNLLLFSDSSHSFG--GSY-NG--QAIGS--LADATIFSFHALKSITTAEGGALLTNDEELAHYARLLLS
HGVEKKS-----------------LWNYDCLLGGMNFRLSEVGAALGLSQLKKLDTFITHRHNIATLYDEAFKNNA-NFG
IIAIPS-HIRSSHHLYPILLYPH-LWCQKEHIFQQLQAQDLGVQVHYKPIYQFSLYKR--LFGDIS--LPNADRFYLSEI
SIPCHQSLSTQQAQNIIEIITKTC
>NTL03HA0472_H.acino/3-369
PFAYSEPCLDEEDKKAVLEVLNSKQLTQGKHSLLFEEALCEFLGVKHALVFNSATSALLTLYRNF---------------
--SDFNADCNE--IITTPISFVATANMLLESGYKPIFAEV-KNDGNIDELALEKLIS------KKTKAIVSVDYAGKSVE
VESIQRLCKKHSLSFLSDSSHALG--SEY-RN--KKVGG--FALASVFSFHAIKPITTAEGGAVVTNDSELYERMKLFRS
HGMLKKD-----------------FFEGEVESVGYNFRLNEIQSALGLSQLKKVSLLMQKREEIALVYDRIFKDNP--YF
TPLHLSLKHKSSNHLYPILIHQK-FFTNKRFILENLHKLGILAQVHYKPIYQYQLYQQ--LFNTAP--LKSAENFYGAEI
SLPCHANLDLESVKSIAHGVLKTF
>NTL06MH3093_M.hunga/7-380
PLPYGRQWIDDDDITAVIAALKGDWLTQGPLVESFEQKIAEYVGSEYAVAFNSGTSALHGAYYAA---------------
--GVRTGDE----VITSPITFVATANAGVYLGARPVFVDIDKKTWCIDTDKINEAIS------NRTKVIAPVDFAGYPVD
MTSIREIAQDHSCIVVEDAAHALG--AIR-GD--VKVGT--EADMTMFSFHPVKHITTGEGGIVTTNNREFAAAMKRFRS
HGITKDPELLHK-NEG--------QWYYEMQDLGYNYRITDIQCALGLSQLEKLERFVKRRNEIARMYDEAFRGNE-KLV
NPPKPPQNSRHAYHLYPVCF----TGVDRKKIFMDLREIGIFCQVHYIPVHLQPYYRERFGYHDGD--FPVAENFYQSEI
SLPMFPAMSDEDVERVIVGVQEMF
>NTL04SD1287_S.denit/1-381
MIPYGKQHISQQDIDLVVQVLKSDYLTQGPKVPEFERVLCSYTDAKYSVVFNSATSALHIACLAL---------------
--NVGPGDL----VWTSPITFVASANCALYAGADIDFVDVDFATGNMSVDALATKLIKAKEAGRLPKVIIPVHLAGHSCD
MAAIHALASQYSIKIIEDASHGIG--GHF-GS--KKIGACQYSDICIFSFHPVKIVTSAEGGAAMTNSHEIAEKMRLLRS
HGIVKDTQHLLRPDEG--------DWYYEQQDLGFNYRMTELSAALGISQMSNIDAFVAKRNELASDYCSQLADLPLMTV
TPIE---NSHSAYHLQIVLFDKD---IDRKQVFNSMRAANIMVHVHYFPVHLQPYYLS-LGFKEHD--FPQAEAYYRQCL
TLPLFPDLTSEQQRFVIDELKRCL
>NTL05PA0654_P.arcti/1-384
MIPYGRQDINQQDIDAVVEVLKSDFLTQGPKVPAFEQAVKDACDAKYALAVNSATSALHIACLAL---------------
--GLKKGDW----LWTTPNTFVASANCGLYCGAQVDFVDIDPKTYNLCAKELEKKLVIAEKAGKLPKVVIPVHFSGQPCD
MEAIYSLSKQYGFKIIEDASHAIG--GKY-KG--EPIGNCRYSDITVFSFHPVKIITTAEGGMATTNSPELAQKLDLLRS
HGITRDTDLMTKPTDG--------PWYYQQVDLGFNYRMTELQAALGVSQMQRLEAFVAKRHELAQRYDTLLKDLP--VT
LPWQHK-NSYSGLHLYVIRLQLDKIKKTHLEVFEGMREAGILVNLHYIPVHMQPYYQS-MGFKAGQ--FPQAEQYYKEAI
SIPMFPTMTNQQQEKIVNTLQQLL
>NTL04PM0096_P.marin/6-388
PLPYGKQSITPDDVAAVTEVLQSPFLTQGPVLPVFEQALSNYTKSQYSIAVNSATSALHIACLAL---------------
--GVEPGDR----IWTSPITFVASANCGRYCGAKVEFVDIDPRTALLDTDLLKKKLIAADRDGALPKVIIPVHLTGTSCD
MALIGELADLFGVHIIEDASHAIG--AYY-MD--MPVGNCRFSSISVFSFHPVKIITTAEGGLATTNDPILAERMYLLRS
HGIERNPEKFELQSPG--------PWYYEQHGLGFNYRLTELQAALGLSQLKRLDLIVDERNRLLDNYKCLLKDLP---I
TFLEIPSSCRSSVHLAVILLETI-NPLNHRRVFEGLRSASIGVQLHYSPVHLQPYYRS-LGWKMDD--FPFAESYASRAI
SLPLFPGLTEDDQQRVADALRTLL
>PFL_1622_P.fluor/5-388
RIPYGRQSISQADIDAVVQVLESPWLTQGPTIERFERGLAEYCQAEHAVAVCNATAALHIACLAA---------------
--GLGQGDL----LWTSPNTFVASANCARYCGARVDFVDIDPHTWNMDANLLAQKLEVAERNGTLPKVVVVVAFAGQSAD
MQAIAELSRRYGFVLIEDAAHAVG--ASY-LG--RPVGCGAHAAMTIFSFHPVKIITSAEGGMVLTNNPEYAERMRRLRS
HGITSDPGLMQVPDNG--------LWYYQQLELGFNYRMTDLHAALGLSQMARLDEFVARRRELAARYQVLLADLP--VT
LPTVQE-GADSAWHLYVVRLDLSRISLSQKQVFDALRAAGLGVNLHYIPVHLQPYYQE-QGFAEGD--FPQAERYFLEAL
SLPLFPELTDALQDEVVAHMRRIL
>NTL01NW0642_N.winog/1-383
MIPYGRQDISSADVEAVVDVLRSDFLTQGPMVPRFEETLARTVDAPEAVAFSSATAALHIACLAL---------------
--GLGPSDR----LWTVPNTFVASANCGLYCGATVDFVDINAKTRNMDVEALASKLEAAERDGTLPKVVAPVDFAGTSAD
LAAIRRLADRHGFRILEDASHAVG--GYY-QN--RPIGSCEFADVTVFSFHPVKIVTTGEGGAATTRSAEIAHRMRLLRN
HGISRDPADMTAVPEG--------AWYYEQVMLGFNYRMTDIQAALGVRQFDRLAEFVARRQTIAARYHEGLAGLP--VI
RQFVPE-GTLSALHLYVIELDQT-VRRTRAEVFAAMRASGIGVNVHYIPVHLQPWYRA-LGFSRGD--FPAAEKYYDFAL
TLPIHPNLSVDQQDYVMERLSYAL
>AHA_4151_A.hydro/1-377
MIPYGRQSISEADIEAVVEVLKSDFLTQGPVVPRFEQAVADYCGARFGVAVNSGTAALHIACLAL---------------
--GVGPGDW----VWTSPISFVASANCALYCGAQVDFVDIEPDTGNMCAMELERKLVAAKAQGCLPKVVIPVHFAGLPCD
MQEIHRLGQEYGFRIIEDACHALG--ARY-HD--EPTGNCRYSDITVFSFHPVKIITTGEGGMAMTNDPALAKTMSMLRS
HGITRDPADFINEPDG--------PWYYEQQMLGFNYRMTDIQAALGLSQMARLEEFLVKRRKIAARYQAELPRPG--LK
ILAHRN-GRISAWHLFVIKVPAE----HRKTLFVQLKEAGIVANVHYMPISAQPAHRR---KSPAD--TDSAHQFYQAIT
SIPLYPMLSGDQQNKVIEVLRRA-
>NTL06PA3077_P.atlan/1-377
MLPYGCHTIDQDDIDAVVDVLQNQFLTQGSTVPAFERALCQYTQASYALAVNSGTSGLHVACLAA---------------
--GVDSSDV----VWTVPNSFVASANCARYCGADVDFVDIDPLTRNISIEGLKNKLANCS---KFPKVLIVVHFAGESCD
MQAISALTSIHNITLIEDAAHALG--ATY-QD--KPVGCCQYSDMTVLSFHPVKSITSAEGGAITTNDEELLKRLTLFAK
HGITRELSTFETQDQG--------AWYYEQQALGYNYRMSDIHGALGLSQLNKLDAFIQHRREKAAVYLTALRPLP--IK
LPSEET-LATSAWHLFMIELTTH----DRKAVFDALRSRGIGVNVHYIPIHLQPYYQK-LGFQKGD--FPLSEAFYKHAI
TLPLFPTMSASQQQHVIDTLIDVL
>CC_0234_C.cresc/21-401
FLPYGRQTIEEDDIAAVAEALRGDFLTTGPTVEAFETAFAAKVGADHAIAVSNGTATLHLAMMAL---------------
--GIGEGDV----CVAPSVTFLATANCARYVGAEVVFADVDPDSGLMTPDTLARALAGARD--KRVKAVLPVHLRGDVCD
LPALKAMASASGAVLVEDAPHALGSIATF-DGVAHPVGDGAYSSFASFSFHPVKTLATGEGGMLTTNDPALAAKARLLRS
HGMVRQPGGD--------------PWWYEMPELGFNYRIPDVLCALGLSQLAKLDRFVARRRDLTALYARLLAERA-PRA
RLATSPDHSDAALHLLTVLIDFEAEGISRRTVVESLKTQGVGTQVHYIPVHRQPYYAQ--RYGVAD--LPGADAWYARCL
TLPLYPAMTNGDVERVVGALATVL
>NTL06MM0717_M.magne/6-396
FLPYCRHVVDEDDIAAVAAVMRGDILTTGPAVAAFEDALAKVVGARHAVVCANGTAALHLAVLAL---------------
--EIGPGDA----VLVPAQTFAATGNCARYAGAEVVLTDVDPDSGLMRVGDLEAAMAAHPG--KRFKAVLPVHLNGQSAD
MPGLAAVARRHGLKIIEDCCHALG--TVAADG--TVIGDCRHGEMNVFSFHPAKTIAMGEGGAITTNDEALATRLRLLRG
HGITRDSAVFVDQEGGFDDSGAPNPWYYEMQALGFNYRACDIQCALGTSQLAKLPRFAEARRRLVRHYRDRLAPLA-PKV
KPITLS-GGEAVWHLSVALIDYQACGTTRAQVMNALRARGIGTQVNYIPMHKLPYYRG--LLGDIS--LPGAEEYYRRCL
SLPLSAAMTEADVDRVVETLREVL
>GCAORF0115_C.arsen/1-392
MLPYGRQWIDEDDIAAVRAVLRSDYLTTGPAIEALETALVEATGATCAVACCNGTAALHLVAMAL---------------
--GVDRQWE----VFVPAITFAASAASFVHAGATPVFVDVSPQDGLLSLPSLEQALGSST---APHKLIVAVHLAGKSLP
MCEIAALATRFGAVVVEDACHALG--GIDPEG--NRVGNCVYSQAAVFSFHPVKHIAAGEGGAITTNDARLAAEMKKLRH
HSIVRDGFSHPQLAAS--AAGNPFPWYHEFDAPGFNYRISDIHAALATSQLTKLKRFVERRREIAAHYLDYLEPIA-GIE
CAYTRSEIPRHAFHLAPVRFAFS-CDGERARLMRALHERGIGTQVHYIPVPVQPCYAQGKSIADLQALFPHAWSYYRQCL
SLPLYYGLSDGDIRYVCDAVIEVF