HMM Seed Alignment: TIGR03601
Download Alignment>gi|487958581|ref/1-91
MNNFQQELQALSLNDYQPGNIVYWD.QQNQYPYYYITDDAR....RCGGCGG.GRC...GGGRCGGG.RCGGFRCFG..C
FG.CFS.CFGCGGC.SNCSNCSNCFD
>gi|42781690|ref/1-90
MNQFQQELQALSLNDYQSGNVVYWD.QQNQYPYYYIEDAAR....RCGGCG..GRC...GGGRCGGF.RCGGFRCFG..C
FG.CFG.CFSCGGC.GGCGSCSNCFN
>gi|487970617|ref/1-89
MNKFQQELQALSLNDYQSGNIVYWD.QQNQYPYYYFEDTAR....RCGGCGRCGGC...GG...GGF.RCGGFRCIG..C
FG.CFG.CGGCGGC.GGCSNCSNCFN
>gi|488047928|ref/1-79
MNKFQQELQALSLNDYHSGNIMYWD.QQNQYPYYYIEDAAR....RCGGCG...........RCGR...CGGFRCFG..C
FG.CFN.CG...GC.GGCGGCSNCFD
>gi|487949468|ref/1-88
MNQFQQELQTLSLNDYRSGDIMYWD.QQNQYPYYYIEDAAR....RCGGCGRCGG....CGGRCGGF.RCGGFRCIG..C
FG.CFG.CG...GC.GGCGGCSNCFN
>gi|488001936|ref/1-92
MNKFQQELQALSLNDYQPGNIVYWD.QQNQYPYYYIEDAVR....RCGGCGGRCGG...CAGRCGGF.RCGGFRCIG..C
FG.CFG.CGGCGGC.GGCGGCGSCSN
>gi|487993212|ref/1-92
MNNFQQELQALSLNGYQSGNVVYWD.QQNQYPYYYIEGDAR....RCGGCGGRCGG...CGGRCGG...CGGGRCGGFRC
FG.CFG.CFSCGGC.GGCGGCSNCFN
>gi|446924613|ref/1-87
MNEFQQELQALNLNAYQPGNVVYWDQQQNQYPYYYIQDDAR....RCGGCGGGGRC.GGCGGRCGG...CGGGRCGG..C
VG.CVG.CV.......GCFSCSNCWN
>gi|488100748|ref/1-85
MNEFQQELQSLNLNEYQPGNVVYWDQQQSQYPYYYIQDDAR....RCGGCGGRCGG...CGGRCGG...CGGGRCVG..C
VG.CVG.CG.......GCFSCSNCWS
>gi|446994120|ref/1-84
MNQFQQELQSLNLNDYQSGNVVYWDQQQNQYPYYYIQDDAR....RCGGCGGCGGRCGGCGGRCGG...CAG.RCGG..C
VG.CAG.CF..........SCFNCWN
>gi|489299784|ref/1-83
MNEFQQELQSLNLNDYHPGNVVYWD.NQNQYPYYYAQEDAR....RCGGCGRCGG....CGGRCGG...CGG.RCFG..C
FG.CAG.CG...GC.GG..GCFSCWS
>gi|507060526|ref/1-78
MNEFQQELQSLNLNDYHPGNVVYWD.NQNQYPYYYAQEDAR....RCGGCGRCGGF....GGRCGG...FGG..CGG..C
FS.CFS.CF..........SCWSWWF
>gi|515716814|ref/1-77
MNEFQQELQSLNLNDYQSGNVVYWD.QQNQYPYYYVQEGAR....QFGGCGRCGGC.....GRCGG....CG.RCGG..C
FR.CFG.CF..........GCFGCWS
>gi|518904534|ref/1-92
MNNFQQELQTLNLNDYQTGNVVYWD.SQTPSPYYIEEDYTR....RCGGCGRCGG....CGGRCGGFGRCGGFRCFG..C
FG.CLG.CGGCGGC.GGCGGAGFWWD
>gi|518070592|ref/1-82
MYDFQNELQMMNVGDFQTTDAIYYN....QNP..YVMDASR....RCGGCGRCGGC.GRCGGRCGGFGRCGGFGCFG..C
FG.CFG.FF.........GPCGGFFI
>gi|336236733|ref/1-91
MYNFQNELQMLGLDDFAAGEVMVWD.PQTQ...TYLIDDARQFGGRCGGFGRCFGQ...CFGQCFG..QCFG.QCFG.QC
FGQCFGQCF..GQCFGRCGG..RCGG
>gi|567927796|ref/1-71
MHNFHNELQGLGMDPYLTGQVVPFG.QQ.......IQDT......RVWG.............RCGGF.RCGGFRCGG..C
FG.CGG.CG..FGC.GGCFGGFGCFG
>gi|567926189|ref/1-75
MFNYHNELHTLGMDPFHVGRLIPMG.PQSQDLRLFV...GM....RCGG....MMC...GGMMCGGM.MCGGMMCGG...
MM.CGG.MM....C.GGMG.....FI
>gi|404488320|ref/1-77
MQPFHDELQSLEMDHFQADDMTHWDPDRH.......HANVK....HCASCWSCGSC...AS..CWS...CAGHSCWS..C
MG..HS.CWSCAGH.....CCWSCWH
>Sonorensin/1-89
MQYFHDELQSLGMDHFHVDEMTAWDPNRHEVNAKHCA.SCW....SCGSCASCASC..ASCWSCAS...CAS..CWS..C
AS.CAS.CWSCASC.ASCWSCASCWS
>gi|226312288|ref/1-87
MDEFKKELKKLKASEIKGDRMQRWD.KEKMNDATLVRG.......RCGGCGRCGGC...SRCSCGR...CGRCSCSC..S
CS.CSC.SCSCSCT.CSCTCFFPCFI