HMM Seed Alignment: TIGR03618
Download Alignment>OMNI|NTL01FA4470/1-132
PRALLA-ASRLGVLATIKADGRPQLSPVQPFFDR---ETGVLHVSMTEGRAKTANLRRDPRATLEVTSPDGR-A----WA
TAEGTATLVGPGTDPHGPEVEA------LVHYYRSAAG-EHPDWDEYRSVMVA--DRRVLMRMTVDHVYG
>OMNI|NTL02SC3847/1-127
LLDFVR-PRHRAILLTRRADGSPQGSPLTCGVD----DAGRIVVSTYPERAKTRNARRDPRVSLIVLSDEWNGP----WV
QIDGTAE-VIDAPDSVEP----------LVEYFRNISG-EHPDWDEYRRAMVK--QGKSIVRVTPEKWGP
>OMNI|NTL02SC5093/1-132
PRVLLA-ESRLGVLATIKSDGRPQLSPVMPAYDP---EAGVIRVSTREGLAKTANLRRDPRAALEVTAPDGR-S----WA
TAEGVATLTGPGADPHGPEVEA------LVEYYRAAAG-EHPDWDEYRSTMVS--DRRVLLTITVERVYG
>OMNI|NTL01FA1250/1-127
LLDFVR-PRHRGILVTTRRDGAPQLSPVTMGVDT---AGDIV-VSTYPERAKTRNARRDPRASMCVLSDEFSGD----WV
QVDGTIT-VVDQPAAVEE----------LVEYFRCISG-EHPDWDEYREAMRR--QEKVLLRLRIDRWGP
>OMNI|NTL05RS2427/1-133
LLDLVA-AHNRAVLATIKRDGRPQLSNVIYAWDP---ATQTARVSVTADRAKTRNAARDPRVSLHVSATDFW-S----YA
VVEGDAELSAVAADPHDPAADE------LVDVFRFASGKEHDDWEEFRRAMVS--EHRQVLRVRASKVYG
>OMNI|MAV_1292/1-132
LLAVIS-GNSLGVLATIKRDGRPQLSNVQYHFDP---RSLVIQVSITEPRAKTRNLRRDPRASILVDADDGW-S----YA
VAEGTAELTPPAAAPDDDTVQG------LIALYRNIAG-EHPDWDEYRQAMVT--DRRVLLTLPISHVYG
>OMNI|MSMEG_6485/1-127
LLDFVR-PRHRMVLTTFRADGSLQSSPVTGGVDA---QGRIV-IATYPQRAKSANIRRTPRASVVVLSDEFNGP----YV
QVDGEAE-VIGLPDAVEP----------LVEYFRVISG-EHPDWDEYRQAMVD--QGKCLIRVTPKQWGP
>OMNI|MSMEG_6576/1-132
PRSLLA-EARIGVLATIKANGLPQLSPVTPYYDR---AADIIYVSMTDGRAKTANLRRDPRAALEVTRADGW-A----WA
TAEGTVTLTGPGTDPHGPEVEA------LVEYYRKAAG-EHPDWDEYRSVMVS--DRRVLMKLSVQRVYG
>OMNI|NTL01RX1056/1-122
HRDLLE-SRALAHVATIGPKGEPQCNPVWFDW-----DGRHIKFSQTTARQKYRNVRRDPRVALSIVDPENPYR----YL
EIRGIVEKIEDDPD--HGFINA------MAKKYLGV--------EEYPHHRPG--DERVVVYVRPEHTTH
>OMNI|NTL04MS5103/1-127
LLEFVR-PRHKMVLITHRADGSLQSSPVTGGVDG---EGRIV-IASYPQRAKSANIRRAGRASVTVLSDDFNGP----YV
QVDGDAE-VVDLPEAVNG----------LVEYYRAIAG-EHPDWSEYRQAMVD--QGKCLIRLVPTRWGP
>OMNI|NTL01FA6076/1-127
ATAFVR-DHHRAVLSTTRRDGSPQMSPVTVGVDA---EGRLL-ISTRLTAYKVGHVERDTTVRLCVLPDDFFGP----WV
QITGTAE-IVRLPAAMEL----------LVGYYRDISG-EHPDWDDYRAAMVR--DQRCILRITPTAAGP
>OMNI|NTL06SA1782/1-132
LLKLLS-DHLAGVLVTLKRDGRPQLSNVAHAYYP---DERTLRVSVTDDRAKTRNLRRDPRASYHVTGPDRR-A----YT
VVEGVAELSPVARDPHDETVEE------LIRLYRDVLG-EHPDWDDFRAAMVR--DRRLVLRLRVERAYG
>OMNI|NTL05RS5007/1-127
LLDFVR-PRHRSVLITRKRSGGLQISPVTSGLDS---EGRIV-VSTYPQRAKAANVRHDPAVSVCVLSDEFNGA----YV
QIDGTAE-VLDMPDALEP----------LVEYFRGISG-EHPDWDEYRDAMRK--QNKSLIRITIDEWGP
>OMNI|NTL01NF5273/1-131
ALEFAR-GTQRSVLTAIRRDGRPQLSNVLHTVAP---DGAVL-ISITADRAKYHNLRRDPWAALHVTSEDFR-S----YV
VLEADVTLTPVATTPDDPAIDA------LVDYYRLAAG-EHPDWTDYRRAMVA--DRRVLARLTPHRAYG
>OMNI|NTL02SC1087/1-127
WRAFVSDGTRTGKLSTVRADGSPHIAPIWFLL-----DGDDLVFNTGKDTVKGRNLLRDGRIALCVDDDRPPFH----FV
VLQGRAR-ISEDLGELRHWAGR------IGARYMGEERA-----EEFGARNGV--PGELLVRVTVDKVLA
>OMNI|NTL01RX1184/1-127
RRGFLLAGTRTAKLSTVRPDGRPHVAPVWFLL-----DGEAVVFTTHESTVKARNMRRNPRVSLCVDDERPPYS----FV
LVEGTAR-LSAGDPELLDWTTR------IGGRYMGQERA-----EEYGRRNAA--PGELLVRVEPVRVVA
>OMNI|NTL01FA3667/1-127
WREFVSAGTRTGKLGTVRADGRPHVVPIWFLL-----DGGDIVFNTGAESVKGRALRRTGVATLCVDDERPPYS----FV
TLTGPVA-LSEDLAEVRHWATR------IAARYMGAQRA-----EEYGARNGV--PGELLVRLSPAQVVA
>OMNI|NTL01FA1571/1-121
HRDLLE-RPLFGHLATIRPDGTPQVNPMWMLW-----DGTFLWFTNTTTRQKYRNVTATPQVAVSVNDPEAPYR----YL
EIRGVVERIDPDPL--AEFFMR------LADRYAMKLD---------GPPADA--PHRVAYAVRPTAVSF
>OMNI|NTL06SA6264/1-120
VRTLLD-GKNFAGVATLGPDGAPQNSVVWIKR-----EGDTVLFSSTAGRQKVRNLRRDPRISLSVFDLANPYT----SV
EIRGTAE-ILPDEN--KRLPYE------LSHKY-LG--------IDPPAEKDD--EVRVIIRVVPQKIVG
>OMNI|NTL01TF2318/1-122
REDILT-KRSFAHVATIGPHGEPQSNPVWFEW-----DGEYIKFSQTTTRQKYRNLKRDSRIALSVHDPDEPHR----YI
EIRGRAEKIEPDPN--RSFINK------MSKKY-LGQ-------ETYPPESPG--EERVVVYVRPEHTTK
>OMNI|NTL04MS0391/1-127
VVAFLSEGTRTGKLGYVASDGRPLVAPVWFIV-----EGNQLVFNTDRDTAKGRALRRDPRVVLCVDDERPPFS----FV
QVQGLAS-TSEDPDGLLDTATR------IGGRYMGADRA-----EEFGRRNGV--PGELVVRITPTKVVA
>OMNI|NTL01FS2112/1-121
HRDLLE-RPLFAHLATIRPDGQPQVNPMWFSW-----DGEFLCFTNTTVRYKYRNVTANPHVAVSINDPDQPYR----YL
EIRGVVERIDPDSA--GTFFMT------LADRYAMALD---------GPPPDA--QYRVVYVVRPTGSSS
>OMNI|MAV_1764/1-127
VVEFLSAGTRTGMLGYVAADGRPLVAPIWFVV-----DDGELAFNTGRGTAKARAIARDSRVVICVDDPHPPYS----FV
QVQGVAA-VSEDPAEVLDIATR------TGARYMGADRA-----DEFGRRNAV--PGELVVRVRPTKVNS
>OMNI|NTL01NF4082/1-125
LKTYIDEAKVFATVATNGPGGQPHLTVVWLAR-----DGDDLLFSTTVDRQQGKNLAADPRVTVLINPPEKPYV----YA
EIRGTAT-LTPDPD--RTLPDQ------LSLKYTGQRYA-----EFNPASAQD--GDRIVVRVTPRKVVG
>OMNI|MSMEG_6848/1-127
LRQVLD-APVFGTVATIDPDGAPQQSVVWVGR-----DGDDVLFAVATGSRKERNLRRDPRVSILLSPPDEPYT----YA
VIHGKAT-LHTEGG--HQLRDA------LAVKY-TGKT-YAEGNADAAARYGD--VAMTVVRVTPERTVG
>OMNI|MT_1924/1-139
AAALAAAERGLAVVSTVRADGTVQASLVNVGLLPHPVSGEPSLGFTTYGKVKLGNLRARPQLAVTF--RNGW-Q----WA
TVEGRAQLVGPD-DPRPWLVDGERLRLLLREVFTAAGG-THDDWDEYDRVMAQ--EQRAVVLITPTRIYS
>OMNI|MSMEG_2791/1-129
AREFIG-NGADATLVTLNPDGSPQATLVWVAFESTP-DGDELVTAHLSEHKKVRNVRRDPRVAVTIADPGKVGKVMRPYL
SITGTAR-IVEGGA--KDLLKR------LAQTLAAP--------DSGFPPEDA--PEGWLTRIRIDKVGG
>OMNI|NTL01FS4252/1-120
VRALAD-ARTYVVLATIQPDGSPRMTVLWVDR-----DEDELLLSTVRGRAKERDIARDPRVGLMFLDQGDPYG----YV
EVRGTAT-LTEEGG--RELIDR------LSVKYTG---------DVYRWDDPD--EVRVVVRVVADRVLT
>OMNI|NTL01FA3578/1-138
AAALSRAESGLAVISTLRDDGGIQASVVNIAFMRHPLTDIEVVAFVTYGAVKLAHLRARPQASATVRS--GW-R----WA
TVEGVAEIIGPDDP--RPGVDAVRLRLLLREVFLAAGG-THDDWHTYDRVMAE--QRRTAVFLTPTRIYG
>OMNI|NTL01FA4161/1-123
HRDLAQ-NAEVAILTTLGPDGAPQTTAVGYLL-----DDGVFRISVSSDKQKLKNLQRTPQCSLFLLDITNVYR----TV
EVRGTAE-VILDDD--YTWAAK------IAESRGRTAD------DIRKLTPPG--EHRYSIAVTPTKVNT
>OMNI|NTL01FA2405/1-120
HRDLLD-SALTAVFVTIGADGRPQATAVWYLP-----DGPTVKVSMISTRRKLVNLRRNPVATLFLVDPANPGR----TL
EIRADVE-LVPDPD--KTVLHR------ITDRYNV---------DFARFSALD--SERTTAVLHPRRVVV
>OMNI|NTL01FA5233/1-124
LRDLIS-SGPLAHLTTINPDGSPQVSVIWIGL-----DGDDVVSGHLGRHVKVRNVERDPRVVLSFDAPRVPGAFLAEYA
VLHATAT-VTAGGA--LDLLNS------LTKVYVN---------PDADFPGPR--GDGFVLRYSINRVGG
>OMNI|NTL01NF3163/1-116
ATAFVA-ERHLATLTTLRADGTPHVVAVGFTWDP---EAGIARIITNDGSVKVRNVRRSGYAAVSQVDGA---R----WL
TLEGPAT-VLDDPDSVADAEHR------YAGRY--------------RVPREN--PTRVVIAIRVAKVLS
>OMNI|MT_2134/1-116
ALAFLS-ERHLAMLTTLRADNSPHVVAVGFTFDP---KTHIARVITTGGSQKAVNADRSGLAVLSQVDGA---R----WL
SLEGRAA-VNSDIDAVRDAELR------YAQRY--------------RTPRPN--PRRVVIEVQIERVLG
>OMNI|NTL02SC0777/1-118
FVRFWQ-ERRVCFLSTRRADGTPHLVPVGVTYDH---ATRTARVITSRDTAKARNVRRAAGAVVAVGQVDGR-R----WS
TLEGVAR-VRDDAGAVRDAETR------YAARY--------------RQPRAN--PERVVIEIDVRRFLG
>OMNI|NTL02SC0844/1-120
AVELLR-RPNPCVMATLRKDGAPVSTPTWYVWDD---DGRVL-INLDAGRVRLGHLRRDPRVTLTVLSGDDWYT----HV
TLIGRVAEMSDDED--LSGIDR------LSRHY-----------TGNPYPNRE--RPRVSAWIEVERWHG
>OMNI|MT_3069/1-129
IADFVN-SSRTGTLATIGPDGQPHLTAMWYAV-----IDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTL--RGV
SFEGVAE-IVEEPEALHRVGVS------VWERYTGPYT------DECKPMVDQMMNKRVGVRIVARRTRS