HMM Seed Alignment: TIGR03661
Download Alignment>OMNI|NT01VC1808/221-299
DRITDFTIGQ........DKIDLSDLFS..D.....ET.RTLDQLLNSHVIEIT..DKG.QNSEIVIN.KGSTEH....V
T..IQLDGVAASD............ILSHLGDI...FKMH
>OMNI|GVCMO10ORF_CA1624/218-298
DRITDFHLSEK.......DKIDLSDLFD..N.....PSEQEVTALLDSIKSTVQ..GDD.HSSSFKVE.KNDGSS....V
T..IQLDGVSSVE............LINNLASI...IQIK
>OMNI|NTL01DS0594/218-297
DHIMDYDTTQG.......DSLDLRDLLS..G.....VSSD......SNLHDNITISSDG.TDTTISIHADGAPAQ....V
VQEITLHGVDATS............MTDQLNEL...NIIL
>OMNI|AHA_2463/201-297
DTITDFHPEEG.......DRIDLADLLK..G.....VTDSSVDGLLGHLQASVTSVSNGLSDVNLSVSPAGD.GQ....V
TQQITLKGVDLSSW.QLGGTSSHDILQSMLDQH...SLII
>OMNI|NTL01VPA0951/206-298
DVIKDFRLDE........DKLDLSDILEFFG.....DDTTDMDNLLEHVS.ADYDSAQD.T...LNLTITGEGS.....N
TMSVALENFDLSGL.ELGSSATSHEIVDQLFHH...QVFS
>OMNI|NT03PP_0615/201-295
DVITDFKLDQ........DQLDLSQILSDGG.....DDKFDMDDLLGHVTSGDLTASFD.NDGKVNLSVTNSDSG....N
TQSIVLENIDSA...SLG.DVSQADILNQLFSH...DAFK
>OMNI|NTL01VFA1162/205-295
DTIKDFTKGE........DLIDITEILNDDV......HQNDLNDLLEHITISEDGDDLTLSITDDA...GKDHTIVVEGG
IGSFGLDNANFS.........NQAEILTKLLDE...QLFK
>OMNI|NTL01VPA0668/208-298
DTITDFTLNE........DTIDLKDVIADLN.....DPMAGIDELLAHIQADYDATT.....DNVSLSITTDAN.....V
HQTIVVENLGQAID.FNG..LSSNEIVESLLNR...GVID
>OMNI|VC_A0849/204-298
DHIRDFNVNEG.......DSIDLIDVVQDLG.....NHLT.MEQLLNNLSVSNQLTAQV.VDNDVTLQVTTDNQ.....V
QQTIVIENLATQID.FTG..MSSLDIIGTLLDQ...NLLR
>OMNI|AHA_3491/206-297
DYVVDFSKAE.......GDKLDLSDLLDHDG....SRNQNDLKSLLSVFQDSEGVHLQVKESSAAP...VTQEI.....V
LMNHTFDSLTGSAS......ATSSQVIDYMLNN...NMLD
>OMNI|NTL03SD1294/208-297
DTITDFELG......AAGDVLSLSDLLVGE...SDTAA..SLDMYLNITSNGTDTTISIDADG.....SQTGGVDLTLVL
KN.VDLTLLGG..........NDQQIIQQLLDD...NNLL
>OMNI|NTL01VVA1398/208-298
DTIAGFDMSAN......SDTIDLSAILSGLG....VSDGASADQFVDLVQTG..ADLHINIKTDG...VNAVQT....IV
LSDLNLEDYYGAG.......LTEAQVLQQMIDD...QNLI
>OMNI|NTL02LP0685/199-297
DTITDFKANPVDQ.SSDASVLNLSDLLSDAD.....LETNSLDNYLNVSTTEE.GDTTIKVDPNG....NGNFD....AP
AQTIILEDVDLTAV...FATNNSHDIVNQMIAN...GNLI
>OMNI|NTL05PS0304/217-299
DVVTDFAAG.........DTLNLLDLLPGAP.......GTDLTQYLDVTQEAG.GIMIHVTDGTG....AASTN.....D
VQTILLASYTTTD........TVTDILNELKAT...QQYT
>OMNI|SO_4317/189-277
DHIMDFKVGE........DKLDLSDLLQGET.......ANTLESYLKFSLNNG..STVIDIDANKD...........GTF
DQHIVLDGVNLYSQ...YGATNNAGIINGLLGSNGQGPLI
>OMNI|NTL04SD0384/179-269
DHITDFNINQ........DKLDLSDLLIGEE.......TGNLSDYLSFSFSGG..NTTITIDADGT...GA......GTA
NQFIVLDGVDLSVQ...YGSANTGDIINGLLGTNGNGALI
>OMNI|NT01FL0988/188-279
DLIQDFNVAEG.......DKLDLSELLHVEA.......GHNIDDYLNFTFDGH..NTSIEIFSNGN...AEH...DGASA
DQMIILENVDLVQ.....GQSD.VIIVNNLLNAEAGSALI
>OMNI|NTL04MP1878/188-296
DTIADFNVAPV...SAGGDSLDLRDLLVGANHV..GTDPGNLESYLDFDTSSTPGSTIIHISSSGG...FANGAYSAGSE
DQRITLESVDLRSALSLGSAASDNQIIQELLTR...GKLI
>OMNI|NTL01BB1182/205-297
DTIKDFSNADI...ADGGDVLDLGELLQGEN.......SGNLTQFLKFSSDGQ..DTVIQVNTQG....HVN...TQG.A
DQTIVLENIDL....TAGGTKDDAAIIQDLLSR...HKLQ
>OMNI|NTL01PE0120/207-294
DVIKDFKAS.......EGDRLDLSDLLQGER.......ASTIDNFLKLTTVN..GESTLQVSTEG...KLN.AAGGLANA
DVTIKLEGVNWS...........NTTINSLISG.ADPTIK
>OMNI|NTL02PF0133/206-294
DVIKDFKAS.......EGDRIDLRDLLQGET.......GSTIDNFLKITTVD..GVSSLQVSSGG...KFNSGDAAAATP
DVTIKLEGNNWS...........SANIHNLIAG.SDPTIK
>OMNI|NTL01AS2609/218-299
DTWTDFSK.......ADGDKIDITALLSGQS.....VSSSTINNYVTVTTKG..ADTVISIDRDGS...AGHTY....DS
TELLTLKNVN..............TTLDELLQH...NQLL
>OMNI|NTL04ST2469/217-297
DRWQNFST.......AQGDKIDIHELLTGWD.....HQAATLGNFVQVHTSG..ANTVISVDRDG....AGSAF....KS
TDLVTLENVQ..............LTLNDLLQN...NHLI
>OMNI|NTL01NE0161/213-299
DIITDFTIGMIGT.DANADIIDISRLLVSFD.....PGTSSVENFLSLTSSG..GNTVINIDRDG....SNLAY....GP
TPLVTLNGVT..............TDLATLLAN...NQII
>OMNI|NTL05PS0306/196-297
DVIKDFTLG......GGGDVLDLRDLLQGELAGTDAASATSLSQYLHFS..EVGGKAVLSVDH....DGGSFAATQTITF
DN.MSLDGLKSGLG..LAPSATDTNIIQKLLDN...GNLN
>OMNI|NTL03RF3766/193-297
DHIMDFTPG......VGGDVLDLKDLLVGEHDGSGVSG..NLAQFLHFAN.DASGKAVLSIDHNGTSDGAAFAADQTIKF
DN.MSMSELATGLG..LTGGATSDDIVAKMLVN...GQLK
>OMNI|NTL01CV0311/209-298
DVITDFGQH......GEKDVLDLKDLLQGE...SHSAS..SLEGYLNFH..KEGANTVIDVHH....QGQGTPVTQQIVL
QN.VDLTQGAT.........LSDAQVLKNLLNH...GQLH
>OMNI|NTL01REB0086/213-298
DTITDFDAKP..V.ASGGDILDLADLLSGMS.....VTSANAAQFIHLSEVG..GNTVVSVDRDG....GGTGA....AF
QDVAVLQGVVG.............IDLNTLLIN...GNIH
>OMNI|NT02OC2048/203-295
DTIHDYNRGSGSFDASEGDRIDLSGLLDSVFS...APGSHNASDYVRVTDVS..GSAMLQVDVHG....SGSN......W
QNVATLTGVSAG............ESIKVILDDHAIHQAT