HMM Seed Alignment: TIGR03900
Download Alignment>gi|149814428/36-1015
DDPAQLRVLDWTLWNVSKYYVESKRVEPAAMTLAGLEALEAIIPEVLVEPTDETKAAVRVRVGTTEQVF-PADANALWAV
GPQVRAVFSFVNDHATLTDDEQREAEYAIVEGVLSTLDPHTNLLRPAAFEDMRTNTAGAFGGLGIEVGMRDNELTVLRVL
PGNPAARAGLQAGDKIVQIDDESTVTMTLNESVGLMRGPAGTEVAIYVRRE---GLDRAKRFDIERAMIKLDSV-TGDIL
PGKDGQGRDAKIGLLQIPRNFSQTTSTELRDKLRDFERAG------VTGIVLDMRDNPGGLLNAAVEVVDAFVDTGTIVS
TVGESSPR---DESKATGDY-RFADVPLVVLVDQGSASATEIVAGALRNLDRAVILGRRTFGKGSVQVLH----DRRVAD
TELALKLTIAQYLTPGDVSIQSVGVSPDL----ETIPVYVGKDY--LAYYGRKRFDLVREESLSAHLVHSTAQQQQITA-
---------GPLFFLQQGSVNDGSGLT-----------------------------EGELPPRIDVEEDAAKRAQMLLRD
PEIRMARDLALW-APSHRRSDILANLPQFTAQQVAIEDARIAASLGSKDVDWAEGPAPTDGKA-AKLEVSLSTDKRGDTI
AGGESGVLTMTVTNAGDAPAYRVRALSDSDYN-YFDERELMFGRIDPGETKTATLKL-----------------------
-SVSAHELSRTDRIDFHLLSQHDAALTANSATSIDVSAKGVDRPKFAYGYQVIDDPKLAAKGNAIV--------------
GNGDGLLQVGERVHLRVWVQNAGPGDARD-TRVQLRNGSGDAVFLHSGRIKVGELKVGKADFVDIDFEVQK---PTDDVS
LQLTVSDAKIGEYLMDELSFPISAPLDFRGEGG-----VSASAQIDLYAGPYEGAPVLARAEAGASFATTGNA-GGWYEL
R--LGKDQVAYAKASALTS-EAKAPRRPGATTTVYPVSPPRIELQDVPGQ--------TADTSITLSGVALDG------E
AVRDVYVTVQNPSRNLFGSAEKISYVASK---DPSSGRLEFSAEVPLEPGNNYIEIVARENGQVSGRQRMWVLRT
>gi|227254500/24-975
HDLSALDVFNVTLVRVRDAYVDPSRIDPKNMLYSALDSVQFNIPEVLIDPYP-EEERVIVHVNDQKKSFSTKAVDSPWRL
SGKLKEIFRFIETHMN-PGADLAQVEYAAINGMLNTLDPHSVLLDPETAREMDMNTSGKFGGLGIVVGMRNRKLTVLRPI
KGTPAERAGILRADHIAKIDAELTENLTLQEAVDRMRGAPDTKVTLWIRRK---GESELLRFDLDRAIIRVESV-ESRML
SKN--------VGYIRI-RQFSGRTGQETREAIDTLEGKG------AKGWVLDLRSNPGGLLEQAIEVSDLFIDQGTIVT
TVGGRERE---PRRARRQDT---NKKPVAVLVNTGSASASEIVAGALKNLDRALVIGSNTFGKGSVQVLY----D--NKD
GS-KLKLTIAQYLTPGDRSIQSLGIVPDIGLQRMLVPEKNDEPTDYLRLLP--PSRSYREKDLRAHLTSRYATDEN----
---------KPTYELPFIYEPPTRPDE-----------------------------NLEAEGAEGIQMEEEPLGDEFVLD
FEIALARDVVVR-SAHGRRDEMVEVAAKILEQRQAAEEEKLVEALGKLGVDWRDAPKREEARPQLEASLSTD----KSSY
DAGDTVTLSGTVTNQGQGPAYRVHARVASDDM-VFEDTEMVFGYIPAGESRTWKVQV-----------------------
-KLPDAAYDRVDRLDVE-FTEARGNAVAA--APVNLRVVAADRPVFAYSHQLVDE-------------------------
SNGDGLVQIGETHHLRVTIKNTGKGTAKE-PTALLRNASGDGILLKKARFELDPLAPGESKTLDFVFDVKPEL-REDEVV
VEMTVYDANLHVSVIEKLHYPVRVPSAGPTPAKG--YVQVARQEAAVLEGAAEDASRVASAPKGAVFQVTGRL-GDWYRV
R--LDDKRPGFIASEDVRPTKSRA--KQSKLTTNWQVTPPAISVEIPAYV--------TQDATYRLSGSATDD------T
HVEDVYVFVSNRDSEV--ENRKVFYKSNR--GGGKPNELPFQAEIPLGLGTNQVTVVARENDEVKSTHTVYVYRS
>gi|108762367/59-1052
HDLNSLRVLTKVILYVKENYVDPKRVKPKEMMIASLEYVEKSVPDVLVDGNA-ETGKLNVNVNGKQREFDIAHVDSLWKM
SFALKDVFDFLSKNMR-PIEDTRDVEYAAVNGMLSTLDPHSVLLRPELYREMKLSTKGEFGGLGFVIQMREGNLTVVKVI
PKTPAHRSGIQKDDRIKKIGEESTVNMDLNEAVSKLRGPVDSRITITVERD---GWDKPRIMTLSRAMISIESV-QHKML
SNN--------VGYIRL-KNFQGNTTRDLEAALTQLRKQADAKGG-FKGLVLDMRGNPGGLLEQAIQVSDTFLSSGTIVA
TVGLSDKL---REEKRARATDGEDSYPIAVLVNAGSASASEIVAGALKNLDRATIIGRQTFGKGSVQVLY----D--FPD
DS-ALKLTIAKYLTPGDVSIQEVGIVPDI----QLVPTRATDER--VDVFA--PRRSMGEADLDQHFGNPDSSTVAKKRE
DVLNR---EKPLESLKYLKVDEKQAQATAKKEEGKAPPKTAANAKKHGDKDPLLDVDVAGMGEDLDDQLDAEAQEEIKED
FEVQFARDFVLR-APATTRKEQLKQGKAFIDQKRAEEESRINAAIAALGVDWSAGP--TPKNVQMAVSLTPG---PDAKI
LAGEVMEMALTAENRGTEPLKRVRAWTESDNA-FLDRREFLFGALAPGEKKTWKVKV-----------------------
-RLPKDLTSRRDDVTVR-FFDDHGALPET--RVAELNFVELPRPAFAFNWQVIDDCAT----------------------
CNGDGTVQRGETVSVLLDVTNAGTGTALD-SFTQIKNGGDANIFIEKGRFKLGELKPGETKTARFQLEVKKGF-KGNTFP
LKLAIIDEPLEEFVMEKLELPVTDAAIATMEPKK--GLIRVGDKVDLYGAPAQGARAVAKLSGTTVLPAEAVT-KGYYRV
E--LEKDRFAFVRSQDAKELKTGKATTPKA-TLVTNHRPPDIRLDVDPAA----GGMVANGDKFTLSGVVTDP------H
GLLDVYVLVN---------DQKVYFKGVD-PKGAEPNTLKFSTEFALKEGNNNVLVVAREDNDFASRRTLVIRRR
>gi|153006754/67-1064
YRLDRLPILSQVILKVKDNYVDPARFDPKKMVVASLESVERAVAEVMVQGDE-KSPKLTLTVGSSQRDLDLTGVDSIWKI
RLVLGEAMGFIQDHLV-AHKELKDIEYAAVAGLLSTLDPHTNLLEPKYFKEMKLQTRGEFGGLGFVIAMRDGNLTVVKVL
KNTPAQRAGIKAKDVIARIEEQSTVNMDLQDAVDRLRGKPQTKISITVQRK---G-AEARKLSLLREVINVETVAQAKLL
EGN--------VGYVRL-SQFSANTTRDLLGALQQQRAQA---GGKLEGLVLDLRGNPGGLLEQAIQVSDLFLSQGVIVK
TVGGGDRQRIHEVKEASSDASDLATLPLVVIVNNSSASASEIVAGALKNNDRALVIGRQTFGKGSVQVLDDLDDPTGSGE
QS-ALKLTIAQYLTPGDLSIQEVGITPDV----LLLPGRALKEQ--VNFFA--PPRSMGEADLDGHLMNPGGAGPAEVAK
AEAKKRRVEKAPLELRYLLDEKEDQVA------------KALKRDLAGDAAAAHEDVFELTPEQVEDEEAEADPDRLVED
YQIRFARELLKR-APQPARARLMESAKALVAERQAQEDERLEKRLRELGVDWTAEAPAGRGTPRPVVTLTPA---PGKDH
RAGETVSWTVTVENKGDAPFRRLRAWTTAEKNALLDRREFVFGNVPPGQRRSWTVPL-----------------------
-KLPKGMDSRRDEITLH-FEEDGGHAPAD--LLTSVGVVEVAKPVFAFSVQIDDRQF-----------------------
GNGDGLAQRGETFDVRLDVRNAGTGAAGDKTWVSLKNLGDEKLFVKKGRESLGALKPGETKSARMEVELRRGS-KSDTLP
IRVMIVDEKMEEYVSEKLDWPIAKDEQARTPASG--AIRVEVAEATLRSGASAAAPAIATARRGALMPVDAKI-GEFFRV
E--WQKGRFAFVPDSEVRAARGT---RSGTIAAAWQREPPRIALVPDPQR----GAPVVEGDSWKLQGSALVPPSADPDA
RLRDVFVFVN---------EQKVFFKVLP--EDATTSKLDFSADIPLQAGNNVVTVFAREDDEFQSRRSIVVYRR
>gi|162454733/53-1021
YDLTRLEAVNETLKMIRDKYVEPDRVKPKEMLLSALNAVQRDVAQVIVLNE--DPNEVTVRVETSEKKFRIDNIQGPWDV
SARLREVFTFLQKNLRGTEVDLRDVEYAACNGMLHTLDPHSSFLSPEAYKEMNLSTSGAFGGLGVVISIRDQMLTVLNPM
PDTPAGRAGLKRLDRIVKINNESTLNMPLDDAVRRLRGDPGTPVTVWVTREGEGGWQGPKAFELTREVIKVRSV-ESRAL
EGG--------VGYVRL-KTFQATSTAELDAALDGLRSKG-----QLKGLVLDLRGNPGGLLDQAARIADKFLADGVIVS
TVGASEGR---EEKRAKGPG-TEPLYPIVVLVSGNSASASEIVAGALKNNDRAVIVGSQTFGKGSVQLVF----PDVTAE
KA-ALKLTIAQYLTPGDISIQGVGVTPDI----ELDPMTVDELE--MDLTV--QKDGLRERDLSAHLSNARAAAAG----
---------KPSEVVRYQLTSADREKM---------------------------------------RERGGDIDEDFSID
FPIRFARELAARMPPSTPRLQQLRAMHDYIEQVGKEELGKVAAELTKLGVDWSDAPEAVTPAAKSELDVKVETDRPNAEV
TAGQPMELRVTVKNNGKQPVYRLRGTTESDNP-YFDSKELIFGKIGPGQTKSAKAPLGWCDVEGRKVGSTKPRKANEKRV
CTIPMDALSRSDGLKVK-FEVAAAPEPPA--VEIRPTVRALDRPLFQYAYQIADDRE-----------------------
GNGDGLIQKGERVSMYLTVKNVGKGPSYE-TQANIANLSGDGLMLHAGRFDISNIKPGDVRKVVFSFDVEQQL-SEPEAT
LTLSVGDRDLREFASEKVKIPISPRIQLSGGGS---TMKAGAEGATLLPSPEASARGFGRLPAGAVVKVLGEAPGGFLKI
D--LGAGRFAFVAAREVAP-GGGPAPAAVAFEDLYSHAPPTLDIAAAALA--------TTAGTVKITGTASDS------E
RLLDTFIFVG---------SRKLYYKSNR--DGADPKKAEFAFEAPLRPGVNVITVVARETPDTTTRRTLVVRKD
>gi|149820426/53-1052
LDERSFPLLIWSIHTVSQDYYDKTRFDPRGQLLAATDRLGLHTPEFFAVPDASDPGQLEVTVRDQSKRFAIGELKGLDPA
ADRLEEILEFTASVLSLEAEPLHELEYAAINGFLSPLDPHTILLTPEESAELGVKTRGSFGGIGAEIVARDRRILVVRVI
PESPAAKAGLQDNDVILAIDDQSTVNMSSADAQGLLRGPIDTQVVLEVRRG-----DAVVRVEITRGQIAIPTV-IAEML
PND--------VGYLQV-ATFQEDTAEKLLAALQDFQSNA-----QLAGLVVDLRGNSGGLLAQAVGILNQFVKGGELVI
VRSALGR----EHQDATEEIVVPMKVPVVTLVDESSASASEIVGGSMKHLDRGVILGRASFGKGTVQELR----NATPYG
RPLALKLTIAEYRVAGDRKIQNIGVIPDV----ELLPVELLEYEGVARYYDLERFERQRQRGRTAHLPSAVHDAHIEAEL
ALA------KSPLMLRYLSYSPQLAQE-------------------------------------ALQASGGDAASRTLRD
PEIRLARDVALKLVGKEGRRAQVDALPAIVEELSKREGEAIRAGIETWKVDWADV---GPVDAPLEVAVNIVDTKNGELH
RAGEAFTLHVEVRNPGTETLEQVHLITDCARD-ELDGIELLIGALPPGESTSRDIEL-----------------------
-QVLPWYPDFVDTLTVA-AHVGEPEATPDGEASVAFTMLGAERPRFSFDYWIIDDPHLVAEGPARPEHEPWPGEVPFVVQ
GNGDGLLQPGEHVLLAFRAHNAG-GPAPD-ARVLLRNLSGTQGLLEEGLVVHGALAQGEEFTGAFGVSIAPTADPSQPLE
LELIVGDGVLRESVDDKLRFRIVPGRDAVSDAHSGRYKVGGDEPVRLYNGADSSAPVVAELPAGTLLEVVGSS-GDWRAL
AGPKGQGRRLWVPADLLEAASGGKARAALDPKAGRMVDPPHIVLADDAGEDGDDGAPVVETERVTIAGVAEHP------E
RVRDVMVTVRAAGPAQ--PERKVFYLANRAVDGDAAKRLEFSAEVPLSPGSNRVTIIVRDQDKVMRQRDLRVFRR