HMM Seed Alignment: TIGR04120
Download Alignment>gi|120609078|ref|YP_968756.1|/2-561
KDFAALYRALDASTSSLAKQAALQAYLRAAAPADAAWAVYFLAGGKPRQLVPTKLLRQFAREAAGLPEWLFDESYEAVGD
LAETIALLLPAPAEAHALGL--A--------------------------------------------------EWVEQHL
LPLRGMAPEALEPMLRAQWNRLAPEERLVYFKLITGAFRVGVSKLQVTQALAAV--SGVDPKRVAQRLMGYTHIGARPGP
ADYERLVAPLAET-----GQGAADDAAQSGETSGHPYPFFLAHPLSLPVDQFAATLGPPGGWIVEWKWDGIRAQLVRRAG
A-----TWVWSRGEELVSDRFPELQRLGQEALPDGTVLDGEIVV---WQHAEGDAPAR---------------VRPFADL
QKRIGRKTLGPKLLRELPVVLLAYDLLEED----GK-DLRALPQHERRARLDALLARVS----HPALVASPLLHGHDWDE
LAARRAHARS---LG-------VEGMMLKARDAQYGVGRTKDVGTWWKWKIDPLSVDAVLIYAQRGHGRRASLYSDYTFA
VWDGPPGAEGRSLVPFAKAYSGLTDAEMARVDAVIRRTTVETFGPVRSVKPT----LVFELGFEGIARSARHKSGIAVRF
PRMLRWREDKPVEEADSLETLEALL
>gi|71736420|ref|YP_273646.1|/2-566
KAFAELYAQLDATTSSNAKLAAMRDYFEKAAAEDAAWAVYFLSGGRPRQLVPTRVLREQAMTLANLPEWLFEESYQAVGD
LAETLSLLLPQADHSNDEGL--A--------------------------------------------------TWMEDKL
LPLRGLPPEELAERLPMFWSQLDRSSLMVCIKLITGSFRVGVSKLLVTRALAAL--ADIDSKRVAQRLVGYTDLSHRPSA
ERYLKLIAPE--------SEDEHAQRG------GQPYPFFLAHSLQQPADQFEELLGAAENWQVEWKWDGIRAQLVKRDG
R-----LWIWSRGEELVTDRFPELHSLA-QCLPDGTVIDGEIVV---WKAPDPSPDGSAEFALNGDATTASPSVQPFALL
QQRIGRKTLGKKILADVPVVVLAYDLLEWQ----GD-DWRSRPQHERRAQLETLIESVQ----SEVLMPSPVLTGKDWLD
LAKQREASRS---LG-------VEGMMLKARDSLYGVGRTKDMGVWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFA
VWDGPPDASERTLVPFAKAYSGLTDEEMRKVDAIVRKTTVEKFGPVSSVTPT----LVFELGFEGIALSKRHKSGIAVRF
PRMLRWRQDKPVAEADSLASLQDLL
>gi|187919990|ref|YP_001889021./2-553
KRFAALYTALDATTSTHDKLEALTSYFAVAEPEDAAWASYFLAGGKPRQSVPTRLLTEIARERAGLPAWLFEESYHAVGD
LAETIAHILPPAQRSSELGL--T--------------------------------------------------QWIEQRV
LTLRGVSPEELRTRLLSYWDELDWGGRFLLTKLIGGGFRVGVARQLVVRALAEV--AGVDHKRIAQRMVGWTDSQQKPDA
ARYLRLIAPEATGDETQAGDHPHESDL------GLPYPFFLAHPLQAD----PATLGDPSQWQIEWKWDGIRAQLVKRGG
R-----VWLWSRGEDLITDRFPEVAALGE-ALPDGFVVDGEILA---WERGDMA-------------------PLPFARL
QPRIARKTLTKKILADSPATLLAYDLLEAR----GQ-DLRMTPLVERRARLEALAVSIEGTLAQDLLRVSPLVDAVDWQA
LAALRDESRA---RG-------VEGLMVKQRESMYGVGRTKASGTWWKWKIDPYAIDAVLLYAQRGHGRRASLYTDFTFA
VWDE--ANGVRTLVPFAKAYSGLTDEEMRQVDAIVRKTTIEKFGPVRSVTPT----LVFEIGFEGIQASPRHKSGVAVRF
PRMLRWRTDKHIDDADTLAMLKGFI
>gi|84515398|ref|ZP_01002760.1|/2-525
KAFATLFSALDESTKTSAKVAALADYFRTAPDSDKLWTIALFTGRRPKRVITASKLRLWAAEVAGLPDWLFEESYSIVGD
LAETIALVLPAPRATSDASL--T--------------------------------------------------DWI-MHL
RALGMQDDDARKAGIIAAWDRLPPAERFLFTKLLTGGLRIGVSAKLMTRALAQA--TGQPEPELTHKLMGNW----TPDS
VTWASLIE----------ADDPGTDA-------SRPYPFYLAYGLED-----LATLGPPADWSAERKWDGIRGQFILRGG
T-----HYLWSRGEDLMTDRFPELAQLC-DALPDGTVIDGEVLA---FADDA---------------------PLPFAAL
QKRIGRKTVPRKLLTEAPVILMAYDLLEHD----GR-DIRALPFADRRAALARLVARVS---TNAPLRLSPQVTFGTWDD
LAAARSQSRD---VG-------AEGLMLKRHDSPYLAGRKK--GDWWKWKVDPLTIDAVMIYAQSGSGRRANLFTDYTFA
VRDG------DAMVPFTKAYSGLTDAEFRQITAWVRKNTLQKFGPVRQVPAV----HVFEIAFEGINASPRHKSGVALRF
PRMLRWRQDKPVAEANTLDDLREML
>gi|163739164|ref|ZP_02146576.1/2-518
QAFAELLEQLAFTPSRNGKIAHLTTAFATIPDPERGYALAAITGDLALRNVTPSLLRGLVAEE--TDPELFRLSYDFVGD
LAETVALIWPHSDTVID--------------------------------------------------------LSLTDAV
HELTNTAKAQLPALIARRLSQMTPTQRYAYLKLATGGLRVGVSARLARSALAQF--GDVDVTEIEELWHGLT----PP--
--YLPLFAWLEG------GEKPVNLAA------APFRPVMLSTGTDLE-D--LASL-SPADFIAEWKWDGIRVQAVNDKG
T-----RRLYSRTGEDISGSFPDVIE----ALNFDGVLDGELLV---KRGDS---------------------VAPFGDL
QKRLGRKKVGKAMLASHPAALRVYDVLYWN----GE-DLRPRTLADRQIHLKTCVCDLR----DPRIDLSLPLDFETWED
LAKLRADPPN---SV-------IEGVMIKRRDSAYIAGRKR--GYWFKWKRDPMLVDAVMLYAQRGHGKRSGYYSDFTFG
VWND------DQLVPVGKAYFGFTDAELKELDRFVRNNTIDRFGPVRAVKPE----LVLEVAFEGLNESSRHKSGLAMRF
PRINRIRTDKPALEAGTLAELRAFL
>gi|119383166|ref|YP_914222.1|/2-514
KAFAALLERLAFTPARNAKLQLLQHYLERTPDPDRGWALAALTGDLELRRVTPSLLRGLAAER--VDGELLALSYDFVGD
LAETIALLWPEGAEDD---------------------------------------------------------PSLSQAV
ALLQGTGKAALPGAIAGMLDRLGPSERLAFLKLATGNLRIGVSARMARTALAGM--GVPSVPEIEEIWHGLA----PP--
--YAPLFGWLGG------GARPESAAL------APFRPVMLSTPTDLD-E--LRAL-DPGDYLAEWKWDGIRVQAVSEGG
M-----RRLYSRTGEDISHAFPDVIE----AMDFDGTADGELIV---RREGE---------------------VAPFGDL
QKRLNRKTVGKGLLASHPAGLRLYDLLLWD----GR-DLRAEPLGARRTVLEAVDFG-------PRIDISPLLDFATWED
LAALRAEPPA---AV-------IEGVMIKRRDSAYVAGRPR--GPWFKWKRDPMVVDAVLIYAQRGHGKRSGFHSDFTFG
LWDG------GELVPVGKAYFGFTDAELRELDRFVRQNTVERYGPVRALAPK----LVVEVAFEGLNRSTRHRSGVAMRF
PRISRIRWDKPAAEADRLETLEAML
>gi|84684622|ref|ZP_01012523.1|/2-518
KAYAALLERLAFTPGRNAKLALLQNYLTTAPDPDRGYALASLTGELDFAGAKPALLRALVSER--VDSELFTMSYHYVGD
LAETIALIWPGQGEARD--------------------------------------------------------VPLSEVV
ERLNAASKTETPAMIADWLDALDPSERLALLKLMTGGMRVGVSARLALTALAGT--GDVPLDDIMELWAGFK----PP--
--YEPLFAWIAG------GPKPEPTIK------APFRPVMLSTPNDYE-G--LSAL-DPADFAAEWKWDGIRVQAAAHGY
E-----RRLYSRTGEDISAAFPDIVD----RMEFSGALDGELIV---RRADE---------------------VAPFGDL
QKRLNRKTASKALLSSHPAALRLYDILIWD----DE-DMRELPFHERRARLEAAVTTLD----PLRFDASPLLDFDTWDA
LAAHRADPPA---AV-------IEGVMLKRLDSAYVAGRPR--GPWFKWKRDPMIVDAVLLYAQRGHGKRSGFYSDFTFG
VWDD------DRLVPVGKAYSGFTDEELKRLDKFVRQNTVERFGPVRSLSPE----LVVEVAFEGLNRSKRHKSGVAMRF
PRISRIRWDKPAKEADHLTTLEAML
>gi|239834361|ref|ZP_04682689.1/2-538
RAFAELLDRLVLTPQRNGKLRLLIDHFRTTPDPDRGVALAAITRDLELQSVKPAMLRALIAER--TDPTLFAYSYDYVGD
LAETISLIWPGPSETAPGAD-----------------------------------------------------LPLGIVV
HELQNASRREGPMLVAGWLDVLGISERYALLKLVTGGLRVGVSARLAKQALADF--GGVDVVEIEELWHGQS----PP--
--YEALFAWLEGR-----GEKPAATAA------APFRPVMLATALDEA-E--IPSL-DASAFTAEWKWDGIRVQAVAENG
L-----RRLYSRTGDDISGAFPDILE----AMDFEGAIDGELLV---GHHGETGIE-----------------TATFSDL
QQRLNRKTVSAKQLRDYPAFVRAYDLLQEGNQQTGA-DLRALPFLERRARLQSFVSRLD----PRRFDLSPVLPFSDFEE
LARFRANPPH---PV-------VEGVMLKRHDSAYLPGRPK--GPWFKWKRDPFTVDAVIVYAQRGHGKRSSYYSDFTFA
VWTG-PE-DEPVLVPVGKAYFGFTDEELKLLDKFVRENTTERFGPVRSVRAEPDHGLVVEVAFEGLNRSTRHKSGVAMRF
PRFSRLRWDKPPREADRLETLEKLL
>gi|221236661|ref|YP_002519098./4-540
RAFAHLLDRLSLTSSRNAKLILIQDHLRQTPDPDRGYALAALTGALSFNAAKPAFIRKAIEAR--MDPQLFAWSYDFVGD
LAETVSLVWPAPSSRKWLGANRP--------------------------------------------------PELSEVI
DALHSASRPEVQRLIEGWLDALDPDGRWALLKLMTGGLRVGVSSRLAKQACANL--GGVDIGEIEEIWHALA----PP--
--YGDLFAWLEGR-----SERPSPDAP------GRFRPVMLAQPLDEEVD--FQKL-DPADYLAEWKWDGIRVQAVSERG
E-----RRLYTRTGDDISASFPDVVE----ALDFEGAIDGELLV---LRDGA---------------------LASFGDL
QQRLNRKTVDAKLLAAFPAGIRAYDLLMDG----ET-DLRALPFETRRARLEAFVASLK----TSRIDLSPLQPFSTWKA
LAALRLEPPEGDARL-------SEGLMLKRRDSVYEPGRPK--GPWFKWKRDPRLIDAVLMYAQRGHGKRSSFYSDYTFG
VWREDED-GRRTLTPVGKAYFGFTDEELKQIDKFVRDHTIERFGPVRSVRADADVGLIFEVAFEGLQRSSRHKSGVAMRF
PRINRIRWDKPAREADELATLEAML
>gi|158422017|ref|YP_001523309./2-548
NRFAELLDRLSYEPRRNAKIRLMSEYFRSTPDPERGVALAALTGKLSFTNAKPGLIRALIAER--TDPVLFELSYDYVGD
LSETVALMWPAPKGLPEMGGNHA--------------------------------------------------PFLSEIV
EGLETLPKRDLPRQLALWLDGLDETGRWALLKLITGALRVGASARLAKTAVAAL--GDLPPDEVELVWPGLS----MP--
--YRELFAWAEGK-----GERPQTTDP------VPFRPVMLAHAIEET-D--FSAL-DPASFAAEWKWDGIRVQAVCARS
SDGTRAARLYSRTGEDISGAFPDLVE----ALDFDGALDGELLI---VREKR---------------------VETFNVL
QQRLNRKAVTTKMLAEFPAHIRAYDLLAVA----GE-DLRPLPFRDRRARLEALIARLE-TQGHTRLDLSPLVPFADWEG
LAAARRDPAS---AGAGLDAEAVEGVMLKGWDTAYLPGRPK--GPWWKWKRDPHTVDAVLMYAQRGHGKRSSFYSDYTFG
VWTQ-GE-EGDVLVPVGKAYFGFTDQELIEIDKFVRRATINRFGPVREVLHEPDEGLVLEVAFEGLARSTRHRSGVAMRF
PRIARLRWDKPPREADRLETLEALL
>gi|163852652|ref|YP_001640695./2-596
NDFAHLLDRLAYEPRRNAKLRLLQDFFAGTPDPERGWALAAMTGGLTFREAKPALIRGLVEER--VDPVLFSLSHNYVGD
LAETTALIWPGPEETPSLRMRGEGALKDEALSESPPHRRLPARTADEVTESLSPQTGRGDPPGPGHNNPPPSVPTLAEVV
ETLASTPKRELPQHLAHWLDALDETGRWALLKLVTGNLRVGVSARLAKTAVGVL--GGHEADAVEEVWHGLK----PP--
--YTELFAWVEGR-----GERPESRNP------APFRPPMLSHPVEEFED--LDKL-EPEAFSAEWKWDGIRVQLAGGRD
GQGRQVQKVYSRTGEDISDAFPDLAE----AITFDGAIDGELLI---LREGR---------------------VQSFNVL
QQRLNRKAVTGKLLEEFPAHVRAYDVLAAE----GE-DLRPLPFAERRPRLDALVRRLD----HARIDLSPLVPFTTWDE
VAAARADPAS---AGAGADADAIEGVMLKRLNSSYLPGRPK--GPWWKWKREPYVVDAVMMYAQRGHGKRSSFYSDYTFG
CWRE-GA-EGEELVPVGKAYHGFTDAELQKLDRYVRNHTTKRFGPVREVAYGREAGLVLEIAFEGVQRSTRHKSGVAMRF
PRVSRIRWDKPAAEADRVDVLERIL
>gi|116251061|ref|YP_766899.1|/2-536
KAFADLLDRLVLTPSRNGKLKLLTDYFRDTPDPDRGYGLAAIAGTLEVRNVKPAMLRELVLER--MDEVLFRYSYDYVGD
LAETISLVWDNERDIDRSALA-Q--------------------------------------------------PRLGEVV
TGMNALGRTEVRSYVRDLLDRLDSSGRFAFIKLATGAMRIGVSARLAKQALADL--GDKDVTEIETLWHGLQ----PP--
--YETLFEWLADG-----GEKPVLATP------AIFHSVMLANAVEEG-D--LTGL-DPVNYAAEWKWDGIRVQLSRSGD
R-----RKIYSRSGDDISGAFPDILD----AISFSGVVDGELLVGGTARSNSP--------------------TRTFSDL
QQRLNRKTVTAKMLGDYPAFIRTYDLLFDG----DD-DVRGRTYVDRRDRLTEIIDRAP----HDRFDLSPLVLFSSWEE
LDTLRAAPPD---PV-------IEGVMIKRRDSVYQAGRMK--GPWFKWKRNPYNVDAVLMYAQRGHGKRSSYYSDFTFG
VWAD-DE-DGEQLVPVGKAYFGFTDAELEVLDKFVRNNTTERFGPVRAVRADKDFGFVVEVAFEGINRSTRHKSGVAMRF
PRIARLRPDKPSYEADRLRTLIAMI
>gi|114327568|ref|YP_744725.1|/2-530
IAFAALLERLIYTPSRNARLALLQRFFETEPDPDRGYGLAALTGNLSFATAKPGLIRALAGQR--VDPELFALSYDYVGD
LAETTSLIWPVSVDILPMA---P--------------------------------------------------PGLAEVV
TTLQSATRIDLPQTLSAWLDSSDESVRFAILKLVTGNLRVGVSARLAKVALAGLSQGRIEPDEIEEVWHGLT----PP--
--YLTLFAWIEGH-----GPRPDPAGA------PVFRPPMLAHPLEQP-D--LETL-SLSEYRVEWKWDGIRVQLVSVPG
G-----KRIFSRTGDDISASFPDVLE----TMNFDGVLDGELLV---AREGE---------------------VAPFADL
QQRLNRKSPGPASLKQHPAHVRLYDILFDE----QERDLRALSFDERRQHLERWFAVAA----PLRMDLSGLIKVENAEA
LIALREGARA---AS-------IEGLMLKRGDSPYVPGRPR--GLWWKWKRNPLTVDAVIMYAQRGHGRRSSFYSDYTFG
LWRDDGR-GHEELVPVGKAYHGFTDQELIVLDRWVRNHTIARFGPVREVEKS----FVLEIAFDAVQRSGRHKSGIAMRF
PRIARLRTDKPASEADRLETLERML
>gi|296535222|ref|ZP_06897436.1/4-529
PAFAELLERLLFTPGRNAKLALLKRWFATQPDPDRGVGLAAIAGELAFSAAKPSLVRELVKTR--VDPVLLAWSHDYVGD
FAETVALIWPEPPQRPNRP---P--------------------------------------------------PDLSEVV
EALELAPKAEIPALLEGWLDVLDPGGRLALIKLVTGGLRVGASGRLARQALADW--SGQPVEEVEEVWHGIA----PP--
--YLPLFAWLEGR-----AERPDPRDA------PVFRSPMLAQPLEEP-D--IAAL-DHSAFRAEWKWDGIRVQASAGPG
G-----RRLWSRTGEDISQSFPEILE----AMEFHAVLDGELLV---IREGE---------------------VAPFADL
QQRLNRKVVGAKMLRDYPVGLRLYDLLFEA----GE-DLRPLSFDARRDRLEAWFAAAK----PARMDLSPQVAFASLDQ
LRGLRDGARA---AG-------IEGLMLKRGDAPYLAGRPK--GLWWKWKRAPLSVDAVLMYAQRGHGKRSSTYSDYTFG
LWRDDGQ-GGRELVPVGKAYSGYTDQELVWLDRWIRNHTTARFGPVREVEKA----LVLEVVFDAAQLSSRHKSGVAMRF
PRIARLRADKPAEEADALATLMAMV
>gi|149185291|ref|ZP_01863608.1/2-528
EEFAALIDALVYTRSRNEKLRLIAEYLRATPDPDRGWALAALSDGLDFPAVKSSTIRNLLKDR--IDPVLWTLSRDFVGD
TAETASLLWPAPDAPPS-----P--------------------------------------------------PTMSETV
ALLGEMSRKTVLTELPKLLDRLDSSGRYALLKLATGGMRIGVSSRLAKTAFAQA--FDVSVDEVEEYWHGLT----PP--
--YADLFAWAAEG-----ADPPDIENL------PTFRPFMLAHPLEET------VV-DLQDYAAEWKWDGIRVQLVRAGG
E-----TRLFSRSGDDISTTFPEFLD----ILPINAVLDGELLVRGTHQGGEEGG------------------AASFNAL
QQRLGRKTVSKKMLTEYPAFIRLYDALLIE----GD-DVRTLPWTERRGRLEALASRLP----GSHFDLSSVVEAKDFDH
LAQIREGSRV---DA-------IEGLMLKRKDSPYIAGRRV--GYWYKWKRDPLLVDCVLMYAQRGSGKRSSFFSDYTFG
CWDGDPD-KGADLLPVGKAYSGFTDDELKKIDRHVRSNTINRFGPVRETDKS----LVFEVAFDSVHESKRHKSGLAMRF
PRIHRIRWDKPPHEADRIEALRALI
>gi|294011708|ref|YP_003545168./2-526
RAFSQLLDGLVYTRSRNGKLDLIAAYMRSAPDPDRGWALAALTGNLDLKAVKSSTIAEMTRAR--VDPVLFEMSRDYVGD
LAETVALLWPKAEDQPPEVDDGS--------------------------------------------------LTLSAII
DRLHATSRAAAPATLARMMDHLDASGRFALLKLATGGLRVGISARLAKTGFAQA--FNLDVDDVEECWHALA----PP--
--YAALFQWAEGK-----ADRPDPAGT------PFFRPFMLAHPLEAE------SV-DLTDYAAEWKWDGIRVQIVGTPG
E-----TRLYSRAGDDITGSFPDIAQ----ALRHHAVLDGELLVKGEFQGGE---------------------AASFNAL
QQRLGRKAVTAKMMEDYPAFVRLYDILLDA----DE-DLRPLPWEQRRARLESIVPQLD----PHRFDLSALIEAPDFDA
LADIRAGARD---AA-------IEGVMLKRRDSPYVAGRKA--ALWYKWKRDPLTADCVMMYAQRGHGKRSSFYSDYTFG
CWTE-----EGELLPVGKAYSGFTDEELKWLDRFVRTNTINRFGPVREVEKS----LVLEVAFDSIHESRRHKSGLAMRF
PRISRIRRDKPAHEADSIAGLRRFL
>gi|241774084|ref|ZP_04771423.1/2-522
KAFSRLLESLYYEPSTLGKTRLLLDYLRTTPDPDRGYAVAIIAGELSLPNFRRSMVMELIRAR--VDPTLLALSHDYVGE
LSETVAHLWPAAEAEPGDL------------------------------------------------------PPLHAVV
GAFRDTPKAQLPDYVVGLLDQMTSPERWALLKIGAGALRIGVSGRLLKQVLAKF--GDQPVERIESLWHGID----AP--
--YQPLFDWLEGQ-----GPEPVVSGR------LTFTPVMLAHPLEAK-D--HALI-TPETYAAEWKYDGIRVQVVDSAL
G-----RALFTRTGDDISGSFPDALA----HLNFHAVLDGELLV---QRGEE---------------------MGTFNDL
QQRLGRKAPSAKYMADYPAAIVAYDVLFLQ----GE-DMRAQPYEQRRALLQAALEHHR----PYGIRLSPQLPFGDFAE
LEALRASVEN--ASV-------IEGLMLKHRDSAYVAGRPT--GPWYKWKITPKLVDAVLMYAQRGSGKRSSFYSDFTFG
LWSG------NQLLPIGKAYFGFTDFELKELDKWVRHNTLNSFGPVREVKKE----LVFEVAFDAVNRSKRHKSGYALRF
PRISRIRWDKPAQEADHLSILEPLA