HMM Seed Alignment: TIGR04292
Download Alignment>gi|212224761|ref/19-405
SEACMSPTDVYAVEVVLNKPGIIYKPYPAFNALHNAIVENDTFIFRSHYDKRLVVVLWNASDGPHLRIEIPAEWRETGLT
KTAFNASLLITTDALEKLKADGWKTRDNLTFTRDNVTITLTPVAGEECTLDGDCATGGCSGEVCAPREEATRIVTPCVYR
EWYTCLGLTSCGCVNGICTWKPNDAFESCLREHGIDPEKVIRAGLVRVEVEAYNM--EPGEVEAAVKDFLSAFGVDCNPA
-LTFVEPMSGRLVPVVDSSEVNFSEAVKVELEWLRDVGVLQ-ISDEDIEAIAKVAGPGKAGPNSHIGWYETKDGTYAWIP
YEESLNPMLVRCTTDEVPTYNLPNGTAYV-GPTVTQS-------PSTDATTSTESSPNGGI---CGPALVVGLSLFA-FL
RRR
>gi|341582558|ref/19-405
VKACMSPADTYAVEVVLNKQGIVYKPYPQFHALHNALIENGTFIFRSHYDRRLYVMLWNGSDGPHLRVQIPVEWKAVDVS
RASLNLSLLLTEETLERLRTDGWNVTDNTTFERNGVRISLTPVTGKECTSDADCATGGCSGEVCAPEKEAREIVTPCVYR
PWYDCLSLTSCGCVGGICTWKPSPAFESCLREHGVDPSKVIQAGYFELEVEAVNR--SDGEVNAAVKDFLSAFGISCDVP
-LTLVKTSVTRLSPSLDPSEVSASKALKAELDWLIETGALR-MDESDVEGVLRAAEWGNAGHNSHIGWYETENGTSAWVP
YDESLNPLLVRCFTREVPAYELPNGTAYV-GPTLTKP-------PSGDSATTSVSAEGEV----CGPGIVALLALLAAFS
RRR
>gi|240102134|ref/60-436
VGACFNPSDLYSVEVLLNKPGVEYNLSPAVPP--VMEIEGKTFLLRV----------WNGSKGLHVWIGIPTVRHLGAYW
V--YSGTFILTSDALEKLRALGWIVN-GSKLIKGNATFRIT-DQGWECKSDSDCATGGCSGEVCGRKGEVEKIVTPCVYA
PWYECFQLTSCGCVNGTCSWKPNPEFEKCLRSHGVDPSKVIRAGPTGI----VGKAPDPEDLREAVEELLKATGINC---
-TKIEVQSRSEEGPAYDTSEVNASMVMMKVLEELVARGVVRGLTEEDIEEIAEVSEWGNAGWNSHIGWYETKNGTYAWIP
YDESKDPLLVRFVGCG--AWDTGNGSSVVSTGEPGTSEGLQHGTPEHIGSPRPSSSVSDSVKALCGPGVITLLSLWPLMI
VRR
>gi|18892598|gb|AAL80724.1|/18-350
ALACFFPEDNYALEVEVEK----YNLNPLLSA-KNVIVDDGRIVYRSHYHPKLVVIVWEEKNKLHVRVQIPTKFDVR--Y
SGKFEGELPI-LELEGKAKALGWKVE-ENKFEKNESVVILTPKT-VECKSDLDCKAGGCSGELCGPRNES--LYSPCVYR
EWYECIKYTQCGCYLGVCTWKPNEEFLRCLAKYNVTFKK-------KFIIEFEGD--LG-----EIERFL---G--VKIE
--NATKSERMSVIPEIDPSKLDAGTAIVEELKWLRKAGVVY-LDDRDLKEIKEVAKWGYAGYNSRIGFYDEK-----WIP
YSNYSQAELIKCGGVGI-AFN---------YTLPSSP-------PEIQEKT-------------CGVGVILILALSV-LA
LRR
>gi|14521530|ref|NP_127006.1|/18-365
AKACFFPQDLYAVEVEIEG---TYNLEPLLSA-KNVLLEDGKIVYRSHYDPRLIVMVWK-DTTLHVRVQIPTSFGKRTIY
TETFEGIIPI-DDVFERAKERGWKVS-GNSIKKENIAIFITPKVGNECKADSDCKAQGCSGEACTPKNET--VFSICIYR
EWYKCLNLTSCGCYHGTCSWKPTEDFIRCLKKYNATLEDIIRAR-AIVTIEVYDE--LGDEIIKEINDTL---G--CNIP
-TNFKKSESQGIIPDINPEDLNANLAIETELKWLRKIGVID-ISEEDIKEISRIAKWGYAGHNSRIGFYDGE-----WKP
YFNYSNAELVRCVGSGFKDYK---------EELPMET-------PEVGKT--------------CGPAILALLSLLA-LG
GRK
>gi|33359324|ref|NP_877787.1|/35-383
ARACFFPQDLYAVEVELKD----YNLNPLLKA-RNIVIEDHKIIYRSHYDPRLIVMIWN-DSKLHVRVQIPTKSVEEKIF
TEEFTGVIPA-QTIVERAKESGWDVK-EYYLKKDNITIYLTPKVGKECKSDSDCKTGGCSGELCLKKNET--AFSTCIYR
EWYECLKLTKCGCYNGFCTWKPNPLFMECLKKYNVSIEKIIKAK-TQIRIEIKGE--INDKIIREIEYLLE-----CKIP
-RNFNEIDKTSIVPTIDPRIVNAGTAIESELRWLREVGVIK-IKDEDIKKISEIAKWGYSGYNAHIGFYDGE-----WKP
YFNASNAELIRCVGNGFKDYQ---------EELPKDP-------PTIERGT-------------CGPAVMILLTLIGILG
GKR
>gi|332159002|ref/21-367
ANACFFPQDTYAVEVELSN----YNLEPLFHM-RNIIIEGDKVIYRSHYDSRLIVMIWN-DSKLHVRIQIPTEFKSEKIY
VNEFTAIIPI-EIILEKAEAKGWNIE-GYHFYKDNVSVFAFPESGKECKTDADCKIQGCSGELCVSKNET--VFSTCIYK
EWYKCLKLTTCGCYNGYCTWKPTKPFIECLKNHNVSIENIVGVR-THVRIEVKGK--LTNQTLKEISELF---G--CNTS
-RKFREITREAIVPKIDPKELNASIAISEELKWLRSIGVIK-INDNDIREISNIARWGYAGYNARIGFYDGK-----WKP
YFNASNATLVRCIGTNFREYE---------EKLPKDP-------PSKGT---------------CGIGLLALISLIVALG
GRR
>gi|337284234|ref/19-384
VSACISPADPYAVEVELNKPGITFDLTPLLRA-ENILLDNGRIVYRSHYDPRLIVILWN-DTYLHLRIQIPLELRNTTDL
KAEVEIIAPLDDSVREKAKSLGWAVD-GWRFTKGRYLVELSPIQGGECRSDADCATGGCSGEICTTRKGAKEIVSICVYR
EWYDCLKLTTCGCYNGYCMWKPTPEFLSCLQEKGLDPKKIVKARYNAI-VLIMDREEPTDEDYREIETLLSVIG--CHAE
-LRFEPVKREGLRPIADPYSLNASEALRIELEWLRDIGVLN-VSEDDIAKISKVAEFGRAGYNSRIGWFDGE-----WKP
YFESENAVLVKCISSEAWTYD-----------APENP-------PVLPSSATPTETIV------CGPGIMLLLVILAAGV
GKK
>gi|242399592|ref/17-395
VSACYNPMDSLALEVRLNKPGIQHDLTSLKDA-KNVIIENGSIIYRSHYDDRVAVILKEVDSSLLVRIQIPAKSFESKYA
YTSFETPLLISNQSLEQIKALGWDVE-DYTFRKRSLFVQISSRKGDECESDSDCATGGCSGEVCAPKEVAKEIVTPCVYR
EWYNCLRLTQCGCYNGLCTWKPNSDFEKCLKDYGVDPSKVIKPPLAEVYIADYGKEKPSEGDIADLKALFEELGIACAFE
EIEFKTETTNAPVGVVDPYSFNFKEALRVELEWLKEKGIIN-ISDEDIEAIVEVAEKGKSGYNSHIGWYE-KGGKYSWIA
YDESDNPLLLRCVGQPF-ELKLPSGQVEL---SQTTT-------PSDTTSQQTGTI--------CGPGLILGLVLVA-RV
FRK
>gi|315231305|ref/18-400
AQACFSPTDNLAVEVYFNKPGIEYNLEPLTNA-ENVLIEDGRLIYHSHYDERVAVILWE-DNGLHLRIEIPVKNWNSTVL
SAKFTTPIIFPENSIEKAKELGWEVEGKHAFRRENILVQITPQKGRECSKDSDCSTGGCSGEICTTRENATKVVSICVYR
DWYECLKLTSCGCVNGVCTWKPNGAFEQCLKEHGIDPNKVIKMPQADVYIAIYGQKELSEEKRAEIKELFSVLGISCVLE
NIKFEKRVTSMPEGIVNPYTFNFKEALRVEIEWLKESGILK-ISDEDIEEIVKVAKRGYAGYNSHIGWYETKDGKYAWIP
YYESKDAKLVKCLGKPM-TYQLPKGTVELGKPSPSQS-------PSTPKSPTSSAI--------CGTGIVVLGVLLP-LS
LRR