HMM Seed Alignment: TIGR04325

Download Alignment

>gi|335043552|ref|ZP_08536579.1/26-264
GWKGNYSSWEDACLH-----STGYDQDDILNKVKESALKVKNGEAAYERDSVVFDEVCYSWPLLSGILLSSVN-SGSIRV
L-DFGGGLGSTYYQNKKFLDLF-DV---VSWNIIEQPNFVNTGQQYFSDGC----LRFYT--DLDSCLDE--QQPNVLLL
SSVMQYIEKPYELMEQLL-KRRFEYIVVDRTPFS---HDDKDQLKLQVVSPVIYSASYPCWFFSETSFVEHYLKNGYKLI
--ESF----------TSLEGNSRDCM-------------FKGMIFKR
>gi|359725522|ref|ZP_09264218.1/25-270
GFNGLYKTWDEAAAL-----CGSYDSGQIIEKCKQSLLKVKQGEAVYERDSVLFNKIQYSWPLLAGLLYSATKSNSGLDV
L-DFGGSLGSSYYQNRNFLQGI-QR---LSWNIVEQSNFVQVGKKHFEDDI----LSFYD--SIESCINDKDRKINVFLA
SSSLPYVKDPFALIKKII-NYNFPYIIIDRTYFI---DLPNSIVSVQRVSPEIYDVSYPAWFFNSEEFVSLFQV-KYDLI
--ADF----------NSYLQVTDIL---EGISTR-----EMGMIFEF
>gi|255532168|ref/18-264
GWFGNYLSWADVLKE-----ADGYDSGIILERTKNALLKVKSGEAVYERDSVIFDKKEYPFPLLTFLQHSASLKGAPLHV
I-DFGGSLGSTYYQIKEFLNPG-VC---STWNVVEQEHYVASGKANFEDGQ----LKFYN--SIAQCIQD--KNIDFVLI
SSSVQYLERPHIFLKELA-AYHFDFILFDRTAFH---EEKEDRLTLQIVPPEVYPASYPSWFFNQEKLLSHFAE-GYDVI
--ADF----------PPYIDGEQILYIDEYPSGY-----SRGFYLSA
>gi|78188648|ref|YP_378986.1|/29-269
IFEGDYVTWEEASAQ-----CSGYDAKNILDKVLDATLKVKRGEAVYERDSVLFDKIEYVWPVLTALMWIAAQSKGKLDV
L-DFGGALGSSYFQNRTFLADL-KQ---VRWSVVEQSHYVDAGKTHIADER----LQFYK--TIEHAVSA--GSPNIVLL
SSVLQYLPNPLIILKQLT-SLNADCLIIDRTPFI--KDKDLSVIKIQHVPSSIYEASYPCWFFNMDKFLEYIESLGYRKI
--EIF----------QSLDRLSNEAI-------------WQGIIFKK
>gi|313895091|ref|ZP_07828648.1/26-279
GIKGDFASWEEAEAFLRDRGLKNYEADNILQTVWESIRQVREGNAVFERDGVLFYEQAYNYPLLAALLYALRNLGGDVDI
L-DFGGSLGSTYYQNRELLSAASNE---VRWSIVEQEKFVRLGQEKLPE------ISFFT--TIDEFLAA-GKSPDLLLL
SGILQYFDDPYAYVAQML-KANFQYIIIDRTFFN--FDTDKDRLAIQYVSPEIYEAQYPVWLLSYEKMMRIMTKAGYREI
--FHW----------DSFDRMPVRIGWGRTRALS-----SKGILMKY
>gi|345892443|ref|ZP_08843264.1/33-274
TWQGDYPDWQSAVAA-----STGYDQDAIFVRVRDAARAVRDGKALWERDSVCFDHEEHNLPLLSALMSVAAWNKGRLRV
L-DFGGAFGSTYWQHKPLLQNL-DS---LSWNVVEQPHVVSCGREEFSSGE----LQFWP--DMQSCAAN--GPIDVVLF
SAVLQYLKLPYASLEQSA-ALNPQAIILDRTPFA----EKGERITVQNVPPEIYPASYACRWLDEEKVRGILKK-AFSLS
--PKW----------RSQVDPPGFWGIMGY---------HQQIILNC
>gi|190890466|ref/39-301
TFDGPYDDWRSAMAD-----STGYDAPAILAKAVEATRAVVQGRASYERDTVIFKERSYSHPLLAWLLYVASRSDGRLRV
V-DFGGALGSSYFQHRSKLAHL-AE---LKWCVVEQPHFAEAGRAEFEDGV----LSFSH--CLEEAIDL--VNPHIVLL
SGVLQYLEYPHQHLESLL-SKDIKFILVDRTSAQ---FDVADVPFVQHVPERIYRASYPVWFLNAHELQDRFARHGYEVL
--DSFQPAGTFGIATPPPLQELTRWGIGLTPAQGQYEWSYTGWFLEK
>gi|281355542|ref|ZP_06242036.1/27-272
RYAGNFPDWKSAEQM-----GSGYQAADILEKVADATRQVLAGNAVFERDSRLFFQEEPNYPLAACLLLAAAREEGKLRV
V-DFGGSLGSVFFQNRCMLAEL-KE---LVWNIVEQPHFVDCGKRLPMPEC----IRFHR--DFRTALSE--CRPNVILF
SSVLQYLPDYHEILQQAI-ASQAAWLLIDRTPLI--SGSDRCRIALQTVPASLYAARYPVHFIGERRLMRELEP-EFELV
--TRF------------ESYPFSIRLRGEKEPIR-----YHGFLWQR
>gi|209548349|ref/1-231
MFSGDYTSFEEAARN-----AVGYDDPNAGIAAATRLAAMIAGTNPVEIDG----RFQQVHSALCIVRERLQK--QRISV
L-DFGGGSGNYYFRLKDYFPE--DS---LDWTVVETPNMVQACAPIGSSH-----VAYLT--DIPDG-----QQYDVAVV
SGTLQYLPEAYGWLERIM--SAAKWVILTRLPVR---EALNDKFMVQTVPSHIHNGSMPIAMFSESKMRTAIETCG-RIE
--QTW----------LVALDEGSLAAVGAK---------PLGFLIQT
>gi|182677371|ref/37-265
RHWGRFETFEEARDFLPSSKRVTYDNDEIVPINLESFA------TIHSFD----------WPVLFFLQRIFNE--NALRV
ITDFGGHIGSKYYAYKDMLTLP-AD---LCWQVVDVPAVVREGRRRLTETPT---LHFYE--KLEET-----QACDILLC
SGVLQYAELSIDEIVARL-PKRPARIIVNKVALS----ENESFYTLEDFG----KYRMPYHILAPDALKESRLRLGYTLL
--AHW----------PIPSRDFIVPSAKGKDHVS-----MVGEAWML
>gi|383774498|ref/14-240
RHRGAYATFDEAAAAVRSGALVGYNNDEVVMHSLEYMSELKLED----------------YPILFWLNRLAPE-----TI
L-DAGGHLGTKYRAFGRHLELR-GR---VDWVIYDLPAIVRAGRRFLDEGKLSG-PTFID--DLAKA-----RETDVLLA
SGLLQYLDVPFDAFLKKL-PSLPRHLLLNKVQTR----EGPTVVTLENFE----CAEIPYQIRNRAEFLASLDKLGYDIV
--DEW----------SIPSLCRTIQTHPHLGRSS-----SRGYYARL
>gi|75911031|ref|YP_325327.1|/40-274
ACRGVYRNFPEALRATPKGAKAGYNQPEISKHPSAAKLTAAREANEFNSQD---------YPILVWLASAFRN---SSTV
F-DLGGNVGHAYYTSKKFLQYP-HN---LQWLVCDIPEVVNAGEELAKKGNNPG-LSFTV--DFSQA-----ENSDILIT
CGTLQYIEPSLAEMLNKL-KKKPRHILINQVPFY----DGETFITLQNIG----YAFCPYKIQNRHEFIASLSAIGYELI
--DNW-----------KLERSCAIPFHPERLVRN-----YQGFYLRL
>gi|294339175|emb|CAZ87529.1|/40-274
LFRGVYSSFDAAQASAPPTRPLGYDNADAAGMYLERIK------RIYPSD----------YPVIFWLQKLFAQ--SQSSV
F-DLGGHIGIGYYGYQRYLDYP-PG---LRWTVSDVPAVMARGADIARERDPAGQLSFNG--DFRVA-----EGVDVLLA
LGVLQYLPDTLAQRLATL-ERPPRHIILNLTPLHVLDNGGQDYFTLQSIG----TAFCPYRIAAYAPFLEGFTRLGYQIV
--DRW----------QNPDKHCHIAFEPEHSVDV-----YHGFYLLR
>gi|239816157|ref/27-255
LFMGSFESFAAAEAGAPESKAVGYSNAKAAGELYT--------HQIYFYD----------YPGLFWLGRSFDE--GMRRV
F-DLGGHVGIKYYAFRRVLPYP-DS---LRWTVCDVPGVVQSGKELAVQRDATAQLDFTT--DYQGA-----SGCDVLFA
SGSLQYLPQRIAEILSGL-AVKPRRIVLNTTAVH----PERTIYTINSIG----IAFCPYRIQHVEELWAELRDAGYKRR
--DAW----------RNEGKPIEVPFVEGGDKPY-----YAGCCFDL
>gi|319943997|ref|ZP_08018277.1/41-270
LFQGVYKSFADAVAHAPDTAPTSYDNTASAKLYLNRL-------QMDDYD----------HPALFWLADAIHH--GMTKI
V-DVGGSVGIKYFAFKPFIEYP-AD---LKWLVIDMPAVAEEGRRFAEERGESASLKFSD--RLADA-----DGMDVFYA
SGALQYLEQSLPEILAGM-KEKPKRIVINTTPIH----EQHDFFTLNNIG----TAYCGYRVQAREPFVRGIEAQGYRLR
--DQW----------RNLGKRMPVIGQPEYSVEH-----YSGFCFDR
>gi|217978414|ref/43-270
LFCGVYHSYDDAEADIVEGRAAGWNNEETASIWLDNIAPMREAT----------------YPLLMWLSILLRE---KMTL
V-DYGGSIGLTFYGFQRYFRLP-AA---ARWIVAEVPTIATQGRKVAGEQDVP--LEFVT--EPQRA-----PPADILLS
AGAIQYMKDIIPGLLDRF-VARPRHILLNKVPLT----DGPTFWTLQNFG----SAVSPYQVYNEAEFFEYFAEAGYRLR
--DRW----------DVHELDCFIPFHPDRCVPH-----FAGLYFEK
>gi|149375185|ref|ZP_01892957.1/34-269
TYRGVYESFHQAQQHAISQLANEYDVINENKGEHLEQEMPILDKRVLDID----------YPLMFWLSRLMQP---SQRL
L-ELGGSIGQGFYSFENFFPYP-DG---LQWVIAELPAAVDAGRKIASQKDEAR-LAFIDSKDMSEE-----EAVDIFMT
AGTLQYMDTSIAETVSQL-KRLPQHVLVHNLPAH----PTEDFWTLQYLE----VCEVPYHITSQANLVSDMEKAGYRLV
--DRW----------KNP-RRIEIPYHLEKTVEH-----YHGFYFAV
>gi|322436074|ref/51-279
GYRRGFSSMAEAEACAARLGVGGHTHPDAIRQHLE------LGESMRPSD----------GPAVEHLRRLLPE---IGRV
A-DVGGSAGNLFYLYSGQVEFP-EG---LVWTVYDLPETVKVGRSLAFDRRVTG-LEFCT--DLFGP-----VEADLMLL
SGSLHFLEALPPEIMGGW-KRRPKYVLVNRSPVS----EEGGVYGLQDQW----TWMTAAKVLNRGDLVGGMGAAGYELV
--DEW----------GAAELRLMLPMRPQSSAAG-----YSGFLFRL
>gi|365898891|ref|ZP_09436823.1/51-279
GYNRPFLTLQDATAA-----IAGYEGGGHHNSSYLSVK-IPEAEKPRPGD----------YAALFHLERVASE---VHRV
F-DLGGSVGNLFYCYSKQLHFP-SD---LRWTVFDLPETNKIGAELARSIQEER-LHFTD--QLMDA-----DGYDVFIS
SGSLHYFQQPLADILAPL-AVKPRYVIVNRAPLV----DVPSLATIQDGG----SYRLACMLHNRAGLIKGMEQLGYVLV
--DSW----------DIRERSVMIPCYPDMSAKT-----YSGLFFRK
>gi|192292116|ref/51-278
CVYQPFPDIDTATRYIRRFIPAGHEHSDVVSQLKQ------FADVTRESD----------YPVLFYLSGYAPG---LSTV
F-DLGGGIGNLFYPYDRELRLP-AT---LRWMVHDLPDKEEIVLQFAKSRNEQR-VGFSR--RMEDA-----SGVDLFIV
SGALHYFEDELAVILGRL-AELPRLVVVNRTPFS----QADPIVTTQVGD----GYVHACKLHSLAGTIAGMEAIGYRFV
--AKW----------PVHERASRVPLRPDLNDT------YWGLFFVL
>gi|296274081|ref/7-248
VWEGIYNDFDDAPSI-----GSGFESETWVQKSVLKIKDVLKQAKRTENY-------VFENIPLYTIASIVYSEKKSLKV
L-DFGGGMGNTYVPLVHTLPQS-TG---LDFWVVEGHENVCAAKKIFEKDAH---INFST--TLPET-----NDVDIVHI
SSSLQYIDD-WESLISLLSKYNAQYFIFTDLPAG---NIKHTYVSLQNYY----ESKIAHTFFKLEDILTVLKKFGYELI
LKNNF----------QANILQVNKHYPQNNFPEEFRIKYGKNLVFKR
>gi|110597156|ref|ZP_01385445.1/48-293
IWEGIYDSWQDAEKNAC---GSGFGGDVYHQRSLTAAKECCHSLCEGIPIPQFHKQRSTLLPITVAMMLSNYE---NIKI
L-DFGGGFGIGYMTLLESVENDMDS---IDYTIVEVPEIIESASALHAGK-----VKYLS--ALPQS-----EQYNLVYV
ASSLQYIEH-WANLLTDLAAYNSEYILLSDVFAG----SNPAFVSLQNYY----DSKIPHWFINFDELIEVLDSIGYKLK
MKSYA----------GSRRLHFDDTLPMDNFPEQYRVKQTLHLLLQK
>gi|83309149|ref|YP_419413.1|/6-249
IWEGVYESFAQAEAH-----VVEPNRGAWLTRLEDRTRDMVHSHRTGTLAP----WGQYCLPAVLAPLYATRD---RLRV
L-DFGGGTGTTYLEVANALFGP-DGRGNLDYIVVDAPDVCDIGRRQLGDA-----VRFLS--SLDDVA----GEFDLVHM
GSVMQYLGDGWRDLLARLCAMASPFILFSDLVAG----PIRSFVTLQTFY----GGSQASRFYNLGEIEGAMSCQGFAKV
MDVPY----------RGSYLGKASPIPMDNLPAENRLTDSRHALFMR