HMM Seed Alignment: TIGR04380

Download Alignment

>gi|116620606|ref|YP_822762.1|/5-334
QLNVGIIGAGRIGKVHAETLAFRLPEARTA-AIADVNR-EAAQAVAARCGIPTVSGSSDEILANREIEAVLICSSTNTHA
DLIVQAAQAGKHIFCEKPIAHSVAEIDRALAAVARA-GVKLQIGFNRRFDANFARVRQAVTSGEIGTPRLMHIISRDPAP
---PPPAYVR-----VSGGMFLDMTIHDFDMARFLIGDEVEEIYTAGGVMVDPEIGA-AGDLDTAVITLRFRNGVIGTID
NCRQAAYGYDQRVEILGSKGSIATGNNYPNQAV-VSTGQEV-RKDLPLNFFMERYTESFASEIREFVAAIREDRPTPVTG
NDGLVAVLMGIAARRSYDERRAVR
>gi|146339270|ref/3-329
IMRFGLLGAGRIGRIHGLNVSSR-GDARLV-AVADASN-EAALSLAQATGA--EVADADAIIADAKIDAILICTPTDTHA
DLIEAAVSAGKAVFCEKPVDLDSDRICRCLATVEKA-GKPLMIGFNRRFDPNFAALEKRLRNGEAGEIEIVSIISRDPAP
---PPVDYVK-----RSGGLFRDMMIHDFDMARFLLAEEPVEVFALGSALVDKAIGE-AGDVDTAAVLMKTASGRIAQIS
NSRRASYGYDQRVEVHGAKGMLRAGNVHETTVE-IATGQGF-RADPVQNFFLERYSAAYRAELSAFIDVCAGKAAPSPSG
RDGLRAQMLADAATLSARGGRPVA
>gi|16125545|ref|NP_420109.1|/1-327
MHDIAILGAGRIGRIHAKNVASQ-PGLRLK-YVVDPVA-AAADGLAGETGA--SVADLETALNDPAVAGVIVASSTDTHL
DYSLKAIAAGKAVFCEKPIDQDLARARSASGELGGK-GVKLFLGFNRRFDPNFQGLKARLSAGVVGALETVHITSHDPAP
---PPVSYVK-----VSGGLFKDMTIHDFDMARWLLDEPVSEVFAAASCLVDPAIGE-AGDVDTAKILLRTASGKICMIS
NSRRSGYGYDQRIEAFGSKGLVRADNVMESTVS-IWGENGA-ASDAFQNFFLDRYAEAYRREMAHFAEIIRGEALPSVGY
VDGVEALALAEAAGLSAKTGQVVK
>gi|223986710|ref|ZP_03636697.1/1-331
MLKIGIIGFGRIGKVHARSIQTRVENACVL-RICDPFMNPAMEAEAQKLGIQRWGTDAGELIHDPEIDAVLICSSTHTHA
ALSIEAAQAGKHIFCEKPVDPDPKRITEVIAAVEKA-GVHFQVGFNRRFDHNFKALRQAVEQGKVGDPHFITVLSRDPEA
---PSLDYVK-----VSGGMFMDMTIHDFDMVRYLSGSEVSEVYAVGDALVNPQIKE-LGDIDSAQITLRFENGAIGCIS
NSRRAAYGYDQRAEVFGSRGSAATQNDTPSTLI-LSDEQGV-QQEKPLYFFLERYMQSFADEIASFTEAIVENKPTAVNG
RDGLIPVLMAKAALKSMREHRPVT
>gi|227500351|ref|ZP_03930417.1/3-329
KLNVGIFGAGRIGQIHAMNLVNN-PNIKIK-RIVDPFA-DKLKDFEEKIGI-KLETDPEVIFNDEEIEAVLICTPTDTHV
DYIVKSAEKGKHIFCEKPVSLSDEESMRAYKAVKEA-GVKFQIGVNRRYDRNFAYAKKLIDDGKVGELELVRVDSRDPEA
---PPLSYVK-----SSGGLFMDMTIHDFDMARFLTGKEVVEVYTQATVKCNKEIEG-I-DVDTAIINLRFEDDSIGVIL
NSRRAAYGYDQRVEAFGSKGTAMVENDLEANVI-FADKDGY-HAPNPEFFFLQRYTGAYNAEINDFADAVFNDRETSVTI
EDAIMAQRIAIAAKESLDSGQAVK
>gi|227818698|ref/3-328
QYEVVIIGSGRIADVHAISVTRN-PRMHLA-GFVDPFD---GAYFGEKWSI-PGFQTLAAAIDTCKPDALVIASPTETHV
SYVLEACRFGLPTLCEKPVAFSREPILEAISAVASS-NIPVILGFHRRFDAYRQEVHARVRAGDVGKVEHILQFSRDPRL
---AARSAVL-----HQGNIVADMVVHDLDELNWFMGSLPERAYAQLDRNADPTLAE-IGDFDTANIILSWEGGAVAHVS
ATRRAAHAFEQRLEVFGGEGRIICEDPRISPVI-FDSAKDT-RISRRFEHFWDRYRPAYQAEIDHLADILARGEAPLCTL
EDGLRAYDLVQIVLSSVQAVTESK
>gi|239617377|ref/6-335
KVKIGVIGAGRIGKIHIENLVKNVPDAEVT-IIADPLV-NETKEWAKEFGIERVVSDPYEVIADPEVDAVVVCSPTNTHA
DLIVATAKAGKDIFCEKPIDLDLKKTIEALRVVEET-GVKLQIGFNRRFDHNFRKIKKLIEDGKLGNVHIVNITSRDPNP
---PSIDYVK-----SSGGIFMDMTIHDFDMARYLVGSEVTEVYAVGGVMVDPRIGE-AGDFDTAAVVLKFENGATCLID
NSRKAVYGYDQRVEVFGSRGNAMALNDRPTNVV-VSTEEGV-SSDKPLYFFLERYMKSFEEEMKNFIDALTKNKELPVTG
NDGLKAIIIAKAATLSAKEKRPVR
>gi|251790915|ref/1-327
MFNIALLGAGRIGQVHAVNIAEH-RETCLY-SVVDPNP-ANAQALSDKYQA--RLQTIDEAMADPAVHAVLIASATDTHA
DLIELAARHGKAIFCEKPVHLDIARVRDCLKVVEQQ-QVPLFVGFNRRYDPQFRRVKTLAGEGRIGKPESLMIISRDPSP
---PPAEYVR-----VSGGMFRDMTIHDFDMVRFIMGEEPVSVFAQGSNLVDPAIGA-AGDIDTAFVVFKFASGAMATIV
NSRRSGYGYDQRLELHGELGVLSAGNIRENQVE-HWGDAGC-LAAKPEHFFLQRYRDAYAAEWRHFVEVLHGRTRPECSG
VDGERALYLADKALESLATGRAVS
>gi|253990189|ref/1-327
MFNIALFGAGRIGQVHSVNITNH-KETCLY-SVVDPHQ-KSAELLAQKYQA--KIQTIEQAMSDPKIDGVLIASATDTHA
NLIELAAKHRKKIFCEKPVHLDIERVRHCLETVEQY-QIPLFVGFNRRYDPQFRRVKTLFDAGTIGKAESLLITSRDPSP
---PSVEYVK-----VSGGMFRDMTIHDFDMARFIIGEEPYSIYAQGSNLVDPAIGQ-VGDIDTAFIVMKFPSGAIAAIT
NSRRSGYGYDQRIELHGEKGLLSAGNIKENSVE-LWENSGC-LTAKPEHFFLQRYREAYIAEWDHFVDVMADRAIPECSG
SDGEQALYLADKALESLHSGKEVR
>gi|255039431|ref/4-332
KLKTGVIGLGRIGQIHLSNLVHHMPDAEVI-IASDLS--PAAHAFAHQLGVPEVTTDAYDVINHPDVEAVIICSPTPFHV
PYTVAAAEKGKHIFCEKPLDVTLEAIQAAEKAVADN-HVKLMLGFNRRFDANFNNVRHLVADNKIGEPHILRITSRDPAP
---PPVEYLK-----VSGGIFLDMSIHDFDMARYIVGSEVTEVFVKGDALIHPEIKE-FGDIDTAVIVLTFENGAIGVID
NSRKAVYGYDQRLEIFGSKGMAKAENNTTDTLI-HFDSNGG-HSSLPLHFFLERYETAYRVCLKTFIDCVLKDTPSPVDA
HDGLMATAIGIAAMKSLTEGRSVK
>gi|258507262|ref/5-340
EVKIGIVGLGRLGKIHATNLATKIPHAKLQ-AATSVVP-EELAWARQELGVEETYEDFDDMVQHADIDAVFIVSPSGFHL
PQIESAMQAGKHVFSEKPIGLDLDAIKHTQAVIADHPELKFQLGFMRRFDDSYVYAKQLVDAGKIGDITLIRSYSIDPAA
---GMESFVKFATSANSGGLFLDMSIHDIDVIRWLTGKEIDKVWAIGLNRAYPVLDQ-AGELETGAALMQLEDKTMAILV
AGRNAAHGYHVETEIIGTKGMLRVAQVPEKNLVTVMNEEGI-IRPTSQN-FPERFAQAFLSEEQAFVDSILTGETVGITA
EDGLQGTKAALALQRAYEKNDIVK
>gi|269122600|ref/1-331
MLKIGIIGAGRIGQVHAESITKYVKEAEVK-SIADVYLNDQVKEWAANMGIAEVYNDYKKILEDKEIDAVLICSSTDTHS
PISIEAINAGKHVFCEKPIDHDVDRIKNVIKALENS-KVKYQVGFNRRFDHNFRAVKEAVAAGKIGQPHILKITSRDPMP
---PAVEYIK-----VSGGMFLDMTIHDFDMVRYLLDSEVEEVYAQGAVLVDKRIGE-EGDIDTAIITMKMENGALAVID
NSRQAAYGYDQRAEVFGSKGQVAAYNDTTSTAE-LSNADGV-TKEKPLFFFLERYMQAYAQEMREFIEAITEDKDVPVGA
IDGLKPVLIGLAAKKSIEENRPVK
>gi|269926628|ref/15-341
PIGVGIIGLGRIGALHADHLMNAIRGARLVRAAVDPA--HKKKLEAEGYPI-PLTDDPGALINDPEVEAVVIASPSTFHY
EHIVLVTEARKPLFCEKPLADNVPDAMKAADKIRTS-GIPFQIGFQRRFDPGYRRARQLIEQGCIGVPELFKGVTCD-RI
---PSVDYLK-----TSGGLFWDLGVHDFDAARFLTGLEIESVYAHGAVLVDKQLEE-IDDVDYGLVILRFSSGAMGVVH
NAWRAPWGYEIRAEVYGSKGKVVTELDEKFPTR-LYDQRGI-VIDR-HTLFTERFRDAYRDEIQAFVDAILAGKIPSPGV
DDAVKALLVADAATRSRKSRDWVQ
>gi|269926631|ref/3-331
KLRVALLGAGRIGSFHARTIAYSVPNARLA-FIADVAG-SLAESLAKELEVERWSDDPLEAIERPDIDAVVIATPGNTHA
ALIQAAASAGKHIFCEKPIALELPEIDNALEVVERH-GVKLQIGFQRRFDSGFLKARDMIRKGEIGKLYMLRSVTRDPQL
---PDENYMK-----TCGGLFRDTMVHDFDIIRFLSGLEVEEIYASGSALVDPMVER-YQDVDNAVVVMKLQGGVIATIE
NSRQAVYGYDVRAEVLGSEGAIRIEHSHETPVT-HYSRTGV--CEDHVYWFIERFASAYRAEILSFIRSVIEDTEPAVTG
IDGRKATVLGLAADRSLRTGKPVR
>gi|296107232|ref/5-332
TCRIGIVGAGRIGRLHAENILFHLPQFELV-AIADP---QIDRNWAEKLGIAIVSNQSEDVLCHPDLDAILIASPSHLHL
EQIITASIHEKAVFCEKPIGLNEEEIEKTLNIIKNN-NTLLQLGFNRRFDPSFASIQKRVQFGEIGTPHILRITSRDPAC
---PSKEYCA-----TSGGIFMDMSIHDFDMARFLMQSEVVEVYATGAVLINPDFEQ-FDDVDTAIIQLRFANGAFGVID
NSRQAIYGYDQRIEVFGSAGMLLAENQLEHTVS-RYSANGT-DGAKPQYFFLERYHQAYLAELNAFYTAWNDNQTSPVSG
LDGLQALRIAKAAKQSLETHLPVV
>gi|297623463|ref/2-327
TLGFGVIGAGRIGALHARHLAGAVDGARLV-AVMDAN--PEAAGRSAFSGAAAVTS-VEALLRHPGVEAVVIASPTDLHA
EQIRLAAAAGKAIFCEKPVALGLRETQEALRAVSAA-GVPFQIGFNRRFDPGYAEVARAVHALELGRPEMFRSQSSDPAP
---PPRAYAA-----VSGGLYLDSAIHDLDTARFIMG-EVTRVTALGRVLVADYLGD-YGDVDTSIVTLEFASGALGVVQ
NSRRTVHGYDLRVEVHGERGKLVTEVERATPVW-RYGESGV-RGD-YIHYFLERFRDAYRLELQAFVDAVREGRAPTPGA
EDAVAALKLALAATLSLREGRPVE
>gi|297623465|ref/5-330
RLHVALIGAGRMAQTHAAVLATL-PGVRVR-AVCDPRE-AAARALAEPLGA-AAVTEAARVFDDPHVDAVLITTPTPTHA
ALVTRAAEAGKHVFVEKPVAATLEEAERVVAAVARA-GVACQVGFQRRFDPAYVEAKRLVDAGELGALEGFRGVSRDPAP
---PPLAFLR-----SSGGLMVDLGIHDLDTARFFVG-EVREVYAVGSVQVEPRLKE-YGLFDTAVATLRFDNGALGTLE
LGLRTAYGYDVRAEILGERGRLHLEMDSRLHLR-RYDAAGG-SFVRPRG-FEERFFDAYRGELLTFFACLRAGQPVSPDA
ADATKSLQLALAAQRSLETGSAVA
>gi|298246842|ref|ZP_06970647.1/5-334
ILRVGLIGAGRIGLLHAQHLAGHIPAASLL-MVADVNE-EAARECAQRFAIPYATQNYQAILENPDIQAVVICSPTDTHA
RVIQEAAQAGKHIFCEKPIALDLPSIDQAVAVVASA-GVKFQIGFNRRFDANYRRVRQALERLEIGRPQILNITSRDPGP
---PPLAYIL-----VSGGLFLDMMIHDFDMARFLIDSEVEEVFTMAGVMHDPALGE-VGDVDTAVVMLRFANGAIATIN
NSRYASYGYDQRVELLGSSGAISIDNKYANTAI-ISDGQSI-RRDLPLHFFLERYNESFLLEMTAFVDSVLHDRPVPVNE
QDGRAPVVLALAARRSLDERRPIS
>gi|302339475|ref/4-334
KLNLGIIGAGRIGKVHIESITTGFTDVRIK-AVADPYLNDETRQWALDRGVEACYKDVDKIIGDDEIDAVLICSSTDTHS
RYTMEAARAGKHIFCEKPLDHDLGRIEEALKVVKEC-GVKFQIGFNRRFDHNFRSLHQAVVDGKVGDVHMVRISSRDPEP
---PSLDYVK-----VSGGLFLDMMIHDFDMVRFLSGSEVEEVFAAGAVLVDPAIGK-AGDIDTAIVTMKLANGALAVID
NSRKAVYGYDQRAEVFGSGGAASVGNDSPSTLS-VSGSNGV-VGEKPHFFFLERYIDAYRNEIGEFIKAVVEDKPTPLGP
EDALMPIRIALAAKRSLETGKPEK
>gi|302339480|ref/3-336
KIKIGSVGLGRLGLRHAENLASKIMGAQLI-ALCDVDD-RKLNDTADRLGVAHRFSDFEAMLKLPELDAVLIASPSALHT
GQISSALAAGKHVFTEKPLGVTVEECKAAEKAVEKYPDRVFMIGFMRRFDDSYMYAHEKVISGQIGRPILFRSYSQDPEK
FIDGAIAFAP-----HSGGEFLDMAVHDIDLARWFLQDEPESVYAIGGCYAHPEFAQ-YKDGDNVSCLMKFRNEAMAFLF
AGRTAPHGYNVETEIIGTKGTLRIASVPQKNLVEVLDSHGV-RRECSEN-FLERFSASYVNEVQEFVDSIRYRRKPAVTV
YDGTKVSEIAYRCKEAFERGTMLR
>gi|310779905|ref/3-332
KLKVGIIGAGRIGKVHAESILYHVPEAEVK-AISDISM-DYVQNVADSLGIPNAYDDYKKILEDPEIDAVLICSSTDTHS
PISIEAANAGKHIFCEKPIDYNLERIYKTLDVVEKS-GVKYQVGFNRRFDHNYARVNEVIKEGKIGTPQIIKITSRDPKP
---APIEYLK-----GSGGMFFDLAIHDFDMARFQAGSEVKEVYAVGDCLVDPEIGK-IGDIDTAVTTLKFENGTIAVID
NSRQAVYGYDQRIEVFGSKGSVEIKNDTATTTI-IRNEDSI-QSEKPLYFFLERYMGSFVEEIKQFIKAIVNDTEVPVVG
FDGLQPVKIAMAATLSVKEKRPVK
>gi|315500555|ref/1-326
MFEVAVIGAGRIGRIHARNVAAH-PALHLK-AIVDPVG-DSAAELAKALGS--EVSTFEAVLADPKVKGVIIASPTDQHL
TQTLQCIAAGKAVLCEKPLDQDLETARGAAAQLGG--DKPLLLGFNRRFDRHFGALKQQLEAGRIGALESLLIVSHDPAP
---PPVSYVK-----VSGGLFKDMAIHDFDMARFILGEEIVEVYAAAACLVDPAIGE-AGDVDTAKTTLKTASGRLCVIS
NSRRSGYGYDQRLEAYGQKGLLKADNVLESTVA-HWGAEGP-VLDAFQNFFLDRYAEAYRSEIAHFADIVAGKAKPMVGY
DDAVRALELAEAAAYSVATGQVVR
>gi|330836065|ref/4-334
KMAIGIIGAGRIGKLHAENISRLVPGVVIA-GISDVHMTEDIRSWAQGLGILRITANPQDIITDSEIQAIIICSSTETHA
DMIIAAAKAGKHVFCEKPIDLSVQKGLLAVETARKN-NVRLQLGFNRRFDHNFRKIRELSKAGTVGDIHIVKITSRDPAP
---PSPAYVA-----SSGGIFLDMMIHDFDMARFQAGSDITEVHAIGSVLVDPEIGK-AGDIDTAIVTLKFANGAIGVID
NSRQAVYGYDQRVEVFGSKGSAEAFNDTETTVK-LSTAEGV-AGDKPLYFFLERYKGAFVSEINSFIEAIGGKHDVEVTG
EDGLEDMIAALAAGKSLKEGRPVT
>gi|332983258|ref/4-333
RLKIGIIGAGRIGKLHAENIVRNVPKAELV-AIADIFA-DQIKEWADELGIHAVTKNYKDILNNPEIEAVLICSPTNTHA
DFIIEAAKAGKHIFCEKPIDLSVDKVKAALDAVKAA-GVKLQIGFNRRFDHNHKAVREAVVEGRVGKPHIIQITSRDPAP
---PPIEYVK-----SSGGLFLDMTIHDFDMARYLAGSEVEEVYAAGAVLVDPAIGE-AGDIDTAVITLRFENGAIGVIN
NSRKATYGYDQRVEVFGSNGSAEDQNDTPSTRI-LSTADGI-IGEKPKYFFLERYNDSFVEEIKEFVDAVINDTDPPVSG
EDGLKPVLIALAAKKSLEENRPVK
>gi|333908548|ref/1-329
MLNFALFGAGRIGKMHAQNLQAF-VHSNLK-YVYDVHA-PAAQEVAKATGA-KVAESVDDALADPEVDAVLIATSTDTHV
ELIIKAAKAGKAILCEKPIDLNTATVNACMEEIKDC-DVPIQIGFNRRFDPSHSTAAKAAHDGSVGKLEQVIISSRDPGM
---APVEYLK-----SSGGIFRDMIIHDFDMARFILAEEVVEIQAFGSALVDEKITE-IGDVDSVMINMRSQSGRLIHIN
GSRRASYGYDQRVEVFGSEGMVISDNQTPTSVV-RYNTDTTGVKDPLFNFFTDRYGAAYNLQLTAFIENVLAKRPVSPSF
EDGRRAQILADAAQRSFDTGEKVK
>gi|340030638|ref|ZP_08666701.1/1-330
MTGIAVLGTGRIGRMHAENIAAH-PRARLA-GVYDIHA-PAAAEVAAQLGV-PHFDSVEAALASAEVDAVLIASSTATHA
DLIEQSVAAGKAILCEKPIDLSLDRVNACATKIAGT-SLPIMLGFVRRFDSGHAGVRKAIESGQIGELHQVTITSRDPGM
---APDAYIE-----ASGGIFRDMTIHDFDMARFILGEEVTEVTATGSRLVDPSLMQRCDDYDTVTVVLKTESGKQAIIT
NSRRAVYGYDQRVEAFGSAGMAISENRALDHVR-LYGAEFTDRATPLKNFFIDRYADAFAAEISAFVDAIEQGKPVPVGF
EDGRQALLLAEAAILSAAKGRTVA