HMM Seed Alignment: TIGR04392
Download Alignment>gi|189220444|ref/18-321
FLGLALFIGGILLLL---QNFFPPKKNIPPRYTVETKEGRFLSLQTF-------FPVQQYRHYVFAKKG----DFWIARY
LDQKKLESVARIFPPKPIGS--EIDDVLYRLWEDVAQVVRTRAPAGSLFIAWWDVSQRLKLLTGKEVWIES---YDPAVI
P-----------KEAHGLLEEVF----GSPLETGRLGVLAQAFRS-PASEGLAILRKALPADRPLLLCVTTDDISNLALA
LGKAPYELGFEMKIFPLAGSDIHGSIPMVMKWVNEKEA-AGFLLQQLPTQGILAWR-ADKKAKETLLGRLLPLTS-SLTH
PLAGVKLLYQSTWGGYIQIYQL
>gi|334111411|ref|ZP_08485681.1/12-328
ALSVALLATGGALLS---RQWIGP-VELKAESGQSETPLSVRRAQESANAVQGHFSAQSVERHAFSQDGKALFDLLVARY
ADRDGARQSAVLFPKEAQALASTPTGMRYELWQAAAEVIARKAPDDALFLSWWDDGQRLHFLAGKEAWLRK-PGMKTFTN
P------VWKALKGTLPL---------ASDEESRHLAQMARWLTM-DSDKAIAEIAAHFGPSRPVYLLVDNDLLLHLAEF
GAYGGAPLKFEAQNIPV-GDDLHGDIARVKRWAGETGD-GNYLAQKEGTYY-RVWSTPDPKVRNTLLVRLLPFVD-SLKQ
LPEGVSLVYQSHWGGFLSVYKI
>gi|53804694|ref|YP_113435.1|/16-316
LAGLVLLLSGGALLL---YDRFRP--------AVTLEEVPATEAERTALEPGGAFPITALTRYALRRGNASV-TLTVADY
RDARNQSHRVTLFP---------ADRLRHDTWKAVGEAIIRHTDGNALFLAWWDDAQRIHFLSGRETWLDR---PAAAAF
PDDEERSVWGKVAGGF-------------AAVPDASRRLARWLTM-EADAALEAMKAELPAERPVYLLVCLDDLARLGEI
EALAGVRLPFEAARFP--GGDLHGQIAAVQQWARQDVDQASYLVQQTPGAGVQAWRITTPQGRDTLLARLLPFTT-SLAR
PLPQAQTVYQSGWGSHITIYAL
>gi|114331655|ref|YP_747877.1|/22-340
PLGILLVTGGLVLLGGYAWLLLTP---DEAPYRYQLAA--TGKVDDYPDLELEAWPNLTINQYDIHLEGTDQ-PIAQAWF
GQRANQPQVLLNWKNETREPLLALDQKAAEL-SALATAIDKYAPRDALLLSWWDTSRQLALLTGRDVLFHS-TLHEPLIV
P-----PEWQAHAQAIRAYENEQTGAAADPQERELFLRFTQSLLN-PLASGLADLR-QLAGTRDAYLIVHISDLYKLG--
-LLYPDKFGIAYKPYRL-TGNLHGMISHVKTEMSNHGY-YAYTVQSLSDELIRAFFLTDEASYHTLLARLLPFTSQPSPL
ELTSPRLVYQQ--GGYW-VYQL
>gi|82701937|ref|YP_411503.1|/25-342
SLGILLVAGGILLLLWFAWAWFNP---GPAPYRYQLAE--EGSADKFPQLGLGKWPDLSIARYEVFAEDIPQ-PLAVLHA
ARQANGPQVRLDWENRTSELLLTTDLKLNEL-ATLAAAIDKYAGKDALVLGWWDTSRQLKLLSKRDTLFSG-QFSDYLVI
P-----TPWQKQADAIRKYEDDFWGGKAGREEEQKFERFADALMA-EPQAGAAILR-ELAGDREAYLAIHVTDLYKLG--
-VMRPGRFDVAYRNFPM-EGNMHGMVDYLKRWVLDNNY-KTYTLQSLSDRLVRGYFLKDDKSDQTLIAQMLPFTQ-SMPL
DLTAVQLIYQT--GGYW-VYRI
>gi|292491206|ref/21-342
FIGVILIAGGLLLLGWLGWAILHSAGDGEAPYQYKKVA--EGGVEKFPDLGLEAYEGMTIRKYELLAEEVQKDPLVEFYT
GSKGDHAPVLLEWKNNLIEPVLTVSGDIKDL-TKLARAIAEHVPSEAVVLGWWDTSRQLELLEGVNTLFDE-NLAQPLLI
P-----GPWAKQQKAIENLEHEFWQVTDSSEAKVRQKRIAEALLA-DEATGASILR-ELAGGREAYVVVHWADAYKLG--
-GMAPERFGIGYNDFPG-SKQTHALIPRVKQWMEENGY-ETYLVQRQGEDTVRAYFLTDSAYKDTLIAKMLPFST-SQPT
ELEKLKLVAQY--GGYW-VYSL
>gi|323139032|ref|ZP_08074091.1/4-315
TIGAVLIAVGVALLGWVAYSTLHP----VAHYTFTLASARADAVKEVENLG---LAPEALQRVEITSPEERR-PLATG-L
VARDETRLAPIVWRNEVTEPIFFADASAADM-TKVLAAIREHVPEDAVVLAWWDFSRAIRVAAKRQAPLDD-SQARGLLI
P-----PAWTGARVD----ERARWGAGANPQSAESFGEFIDALTATDEAQGAATLK-KLAGGKPAYVAVHISDVWKAA--
-AVKPDRFSIGFKDFAS-SGVSHGVIKSAQQWMREQKVEGGFAVEPIGGAT-RLHYFQRKGDSDALIAKLLPFST-SNPM
QLDTLELVYQH--KGWW-IYRL
>gi|56708984|ref|YP_165029.1|/15-328
SVIVPMAVAGIFFFSRGGSVADNT----PDPYAYKVAE--EELSEETRQLA-GMIEGAQAKIYDLTVPETDL-ALARAEV
IELPGGRDLIVGWQSRVTEPVLRSDIKPSEE-IALITALKSHLPEDAVVLAMPDLSDRLSQFAPSHYPLAAMAGQQAYRA
P--------AGTEDTVLRMEKRWLGERSETEQPELFRDFIDAMVA-EDAYGLARLQ-VMAGGSEAYIALHVRDSFDVG--
-ITAPDKILVGLKDFPG-GTHAHDVTRQVKTWIADQDY-AAYTVSQIGDDTIRSYFLADAKDKATLLGQLLPFNT-ARVG
LVPGAKLVFQT--GGYW-VYRI