HMM Seed Alignment: TIGR04445

Download Alignment

>gi|488842122|ref/275-559
ENLRYIEEHKQIFDIENSYPLNLFENFIKEQRKG-KGGTISCCCNIEKERCYPSRFAYLSEVFVSDPALKLLDIEDFLSF
SHRLEERPELQINRSLLQQFLATGLDPSKVDMVTVGVDVRPE-LRHSRIKLYLSIRDYPE---KIAIAIALCG---EQRD
WE---KLIVNGTLLVGFDFFLDNRAAVEVYPTFSPADLQRAD------VQAYLTSRLPAKALPLLYESRTVQIGISNDND
SDILYFNNFKSP-NSAVDYLKNETVNQVHAHYRNR-VFHDLYLGIPESEFYTNSIQRVKMYYHM
>gi|427722830|ref/305-587
KNLRCFHEHKAAFNVENFYPLNEFETFLKSQE----KCNMDCSCKIDSDKLHAGRFNLVYHNHLNDTKNFYIALTDILNF
FGKVESRAGIKLDYQPLQQFLGQDFNFKRLFRVLVGVDAKPE-VSESRLKLFVWLRDYPE---KVKAALDLYG---DFSS
KDEIRSLILNDNLLLEFDFHFNNRTEVKLYPTLHRENFLGSH-------REILGNMLPAKALSLLEMCMQFQIGFSPSNK
SNILYFYPFNSK-HFL-HFIGNEMVEKVQSYYRHQP-LKKVAVCIPIAEFENYSINKINLYYSL
>gi|488855306|ref/9-289
KKNYYISTHKQAFDVENFYPLEIWEKFVEKIEKTSEKCFLESSCKIDQGQFYAARFGIGFDL--QNLQQ----LNAVYNF
CQEVESRVGVRVDYSLIKQFLGDDFDFSKMTEFLIGVDARRE-LAESKLKIALTINDYPE---KLKTAIYLNG---GLDE
TI--EKLIVSNSLHLGFDLSLNGISEIELYPYIGKQDFQRID------IQQRLATVLSPQALRPLAACRRICVGLSKGNT
EKILYYYLEDIK-DFLNYFTPNDTARRVHAYYQKQP-ISEMCVAAPESQFIAEKIEKMNLYYLF
>gi|494597334|ref/24-305
QKLHCINAHRQAFDVQPLYPLDIFQDFITKTD---GIDTIEASCKIEADKLQAARFVALSS---QEIERK---LTEFLTF
FRQVESRVDVQLNYDLLHKFLGKSFDFSKVTRITTGVDLRPN-ISDSSLKIHIRLNDHPENLKKIEAALTLDG---NDST
AQ--RWIALQTVHLIGFDFYLNGRSEIELYCELTEKQFQQPD------IQSFLQQTFPPFVLEPLKVSSVFFTGLSKDNT
EPVLYYCLKDKK-DLLSYFPINDTAQRVHAFYQNQPVYSSMWVGVAQGELQKTRIDNIRLYYSK
>gi|220905949|ref/5-283
QRLQFIKAHQAAFEVEPLYPLALFEALVETFD---EDCALEASCKIEFDQLIASRFLIFFS---QNFEQN---LARVLNF
MTQVNQRVDVQINTDLLYHFLGQKFDFRKMIRLATGVDLRSN-LADSSLKIHIRLEDYPE---KIESALALHG---NPDD
AS--YWADLNAIANIGLDFYLDGRSEIEFYPELSEERFQQPE------MQVLLQQMFPPFVLAPLKASEIFGFGLSKANP
SAVLYYQLKNKQ-DLPSYFAINDKAHQVHGYYLHQDTRPYMCVGVAQSELAKTRIDQIRLYYHQ
>gi|488890896|ref/14-301
QRLQFIRNHQQAFDVEPIYPLRLFEDFVMGVE---GDCTIEASCKIELDKLIASRFLFCFKDPEQHWPSY---LSQGLSF
FKQVENRVGVQFDYSLLQAFLGTDFDFSHVTTFTTGIDLRRESLTESSVKIHFRIEDYIA---KVQTAIILSGYEVGFLE
DF-PKQFLARYIPQIGFDFYFDGRCEIELYFEVKENNFDDPN------VKKYLWSKMPPVALAPLKDTDVFHLGLSKANT
NPVFYYQLKKYKGDLLNHFRLNDTAMRVDSFYRNQETDYGGWVGVALEELEKTRIENIRLYYHK
>gi|488850323|ref/14-293
QRLQFIRNHQQAFDVEPIYPLRLFEDFVMGVE---GDCTIEASCKIELDKLIASRFLLFFKDKAQEWQKY---LAQSLAF
FQQVENRVGVQLDYSLLQGFLGDNFDFSKLEVLTAGIDLRTN-LADSSLKMHIRIGDYPE---KLATAFVLSD---GVAD
SN----YLSGFVHLIGFDFYFNGKSAIEIYAEIREDDFFKPE------TINQVWQHFPKSALKPLQASDLFFTGLSKANN
NPVLYYSLKNRQ-NLINYFKLNDTAQRVHSFCQHQDILPNMWVGTAQQELEKTRIENVRLYYYK
>gi|495325217|ref/15-296
KRLQFIRAHQTAFEVEPVFPLQLFEDFVVSVE---GDCTIEASCKVESDHLIASRFLLFFQEMTQSWPQK---LDQAFRF
FHQTENQVDVHLDYGLLQHFLGNDFDFSKMSVLSTGIDLRQN-LADSSLKMHITIEDYPE---KIATAFSLAK---LPRD
NF--HQILLSSVSLIGFDFYLDGRSEIELYASLKEEEFNSPH------VQSFLASIFCASALKPLGASSSFYMGLSIANE
NPVLYYLLKNKQ-ELQNYFRLNDMGNRVHSFYNQQEILPHAWVGVAEQELQQGRIENIRLYYYQ
>gi|497472927|ref/15-302
QRIQFMHAHQDAFDVSTVFPLPLFEKLVTELE---GSNVIELSCKIEADKLLAGRFLIFSDQ-ENNWHQS---LAQALQF
LDSIESRVGVEINRESLDKFLAAHINSGKIMGISTGLDLRPE-LENSSVKIHIMLGENSE--ELVRTAIAIDG---SHYP
VE-LAQVLLKDTMMIGFDFFLNGHSEVELYISCSRKKDSLPN-NRGESTRYYIRQKFSPKVSSLLDASDFFVGGFSKANV
EPVLYYAFENIK-DIPKYFVFNDLGNRVYDFCRSQDSITMTWIGINERDLDRERLNNFRLYYRR
>gi|167859099|gb|ACA04492.1|/15-304
RRIQRLRHHFESFDVERAFPLPLFEQAVLSLD---SCPLLEPSFKVQEGILFAGRVTTSTGT--EDWQHL---ISTALNF
FDAVESRVEVTIDRGLLEKFLTLHQNSDKIEASLMGIDLRPN-VKESSLKVHLRLDPQQDADELVMTAIDLDG---GDYS
PE-LTQVLLKDTFLIGFDFFLDGGSAVEMYTICPGKKPLAMLGKKGAYLKPYVLSNFSHKVTSLLQEVAALTVGFSKENP
RPVLYFEFETLR-EVKYNLLFNSLGDKIYDFCLHNQIENFVSIGVTEPDLEKRRLENFRFYYRK
>gi|428318542|ref/15-303
QRLRFIRTHRDAFDVPYSFLLPLYEEAVFKIE---GSCGVEPSCNVEGDRLFAGDFQVANYG--HTWPRS---LIDAASF
LDKIERRIDVKINRNLLERFSALYIGSSKIENNTIGIDLRPT-LQDSVIKIYMHIHPGQSNEDLVMTALALDG---AIYS
AE-LTQVLLRDVVVIGFNLFLDGRSNIEIWAGSAGQKHNHQG-NLGRDLTAYIRKYYSHKVNYMFNVSDFSAVSFSKQKI
DPLFHFHFFDIK-DILKYFAFNSLGDKIYDFCQSQDCITYTGVSARAQELESNRLNNYSFFYNQ
>gi|488884363|ref/15-304
RRLQFLRGHQEAFDVEPTFMLSLFEEAVLGIE---ETCGVESKCNVEKDQLFAIDFQVCNDQ-GRTWPMS---LTHAVKF
MDKIESTVGVRLNRNLLEQFATLHMDSHKIENNTVGIDLRPK-NEDSCIKVYLHLAPEEEPEELVKTALELDG---GSYS
PE-LLQVLLKSTIVIGFNLFLNGYSDLELWAACPGEQYEVPNSDRGKYLKQYVQNNFSQKINDLLRESTFLVVSFSNQK-
EPALIFHYEDIK-EIPKNFLLNSLGDRIYSFCQSRDCITYGGVAVTERELEKDRLENFSIFYNQ
>gi|474453199|pdb|4BG2|A/14-302
RRLQFVRTHQEAFDVKPTFPLPLFEEAILEIE---GSCSVESSCQVEGDRLQGGRYEVCNNQ-GTTWPES---LTHAFKL
LDKIDSQLGVRINRDSFDRFAAAHVNSRKIINNTIGVHLGSK-LEDSSVXLYIHIKPEEDTEELARTALVLDG---GRYS
DE-LTRVLLRDTXVIGFELFFDGRSRVDLGPCAPGKSGTLKX--KGKHLEQYTQKNLSRKVNSIFREGYLFGAFFSKTRV
EPILFFYHSIIK-DLPKYFTFNSLGDKIYNFCQSQGCITDVAIAVTETELEKSRLENFCFYYDQ
>gi|167859100|gb|ACA04493.1|/15-303
NRLRCIRTHLEAFDIEPVLQISLFEEVIMEVE---GSCNVKCSCKVERDRLFACQFTLAYSQ--QKWPKT---LKYNAIL
FDKIKSQVGICIDSSKFEQFSRLHVNSDKILDSTVGIDLRPK-SQDSCIRISVHLEPKESPEELVRTALALDN---ATYT
SE-LTQVFLQDCTAIIFECFFDGRSRIELGAVAPGKKHGFSG-NHGRALTAYAQKYFSPKAVSLSEVSDLFGMTISKYKA
EPVLHFGFNNIK-DISNYFLFNTLGNRIYSFCQNQDCILLAIIGVNEKELYSNRLENFLFDYAK