HMM Seed Alignment: TIGR04485

Download Alignment

>gi|148244875|ref|YP_001219569./39-115
KLGNCLACHMIPG---GSLPGTIGPPLFAM-----------KERFP-------------NKADLRKQIWDATIKN-PY--
SIMPPF-----------GKHQ-----------ILTENQIDQITDFIYSK
>gi|74316585|ref|YP_314325.1|/41-120
KKGNCLACHGMPTVPDAVSTGMYGPPLIAM-----------SARYP-------------DKAKLRAQIWDATVAN-PS--
TTMIPF-----------GKHG-----------VLTEAEIDKVTDFVYGL
>gi|291614163|ref|YP_003524320./38-117
NKGNCIACHAIPSDPKVEAAGNIGPALAGM-----------KARFP-------------DTAKLRAQIWDATVAN-PE--
SVMPPF-----------GRNK-----------ILTEQEIDQVIDYVMGL
>gi|89094212|ref|ZP_01167154.1|/42-120
SRGNCISCHAIDD-PDANLAGNQGPPTIAM-----------KTRYP-------------DKRKLRAQIWDASKNN-PL--
TIMPPL-----------GKHW-----------ILSEEEIDAVVEYIYQF
>gi|299134780|ref|ZP_07027972.1/41-117
SKGNCITCHEFKG---GDFPGSIGPALNDM-----------KARFP-------------DRKELTAIIADETKRN-PE--
TVMPPF-----------GRNL-----------ILTDKEISAIVDFLYQL
>gi|92119135|ref|YP_578864.1|/47-123
SKGNCLTCHEFKG---GNLAGNVGPALTDI-----------KKKYP-------------NRADLVAIVTDQTKRN-PL--
TVMPPF-----------GRNH-----------ILTDKEIDAVVDFLQTL
>gi|170738510|ref|YP_001767165./39-115
GRGNCLSCHAIPG---GDLPGNIGPSLAGL-----------KQRYP-------------NREDVVAIIRDETLRN-PE--
TVMPPF-----------GRNL-----------LLSDREIRSIVEYLYSY
>gi|334111040|ref|ZP_08485313.1/37-113
NKGNCLACHAIDG---GESPGDIGPPLAAL-----------KTRFK-------------DKAPLREQIFNATRFN-PE--
TSMPPF-----------GRNK-----------ILTTGEIDRIVDYLWSL
>gi|193212736|ref|YP_001998689./41-117
GKGNCLACHMIAD---GEFPGNFGPPMIQM-----------KERFP-------------ERAVLREQIWDASAKN-PK--
SMMPPF-----------GKNG-----------VLTDKEVDLIVDYLYTL
>gi|78189875|ref|YP_380213.1|/39-115
SKGNCLACHLIAD---GEMAGNLGPPLIQM-----------KQRYP-------------KRSVLKAKLTDATASN-PQ--
TLMPPF-----------GKHG-----------ILSNEELEQVVDYLYTL
>gi|254516193|ref|ZP_05128253.1/35-111
NRGNCYSCHMADG---AQMTGNGGPPLMQM-----------QMRFP-------------DREVLKAQIADPRVRN-PN--
TVMPPY-----------GAHG-----------ILTARELELVVDYIHSL
>gi|334143318|ref|YP_004536474./50-127
AQGNCLACHMMPE---GTSPGNIGPALIAM-----------QLRYP-------------DRQKLFDKLWGVKETEVKY--
SMMPLF-----------GRHG-----------ILSDEEINLIVDYLYTL
>gi|78484949|ref|YP_390874.1|/47-124
SKGNCLACHMVPG---GNLPGNIGPALIAM-----------KLRYP-------------DKQKLYDKVWGKPDTQVPD--
SMMPPF-----------GQNG-----------ILSDDEIQKIVDFIYTL
>gi|148262024|ref|YP_001236151./38-114
ALGNCVACHSFAG---AVEPGDVGPALKNV-----------KAMIP-------------DRKTFYAIVFDEQARN-PQ--
TVMPAF-----------GKNL-----------ILTPTQINEVIDFLYTK
>gi|152992093|ref|YP_001357814./101-182
QYGNCVACHNIEG---AKGAGNIGPDLTGY-----------KAMFI--------DTKTRDYPFVFQKIADPRIDN-PD--
THMTVN-----------LTTK-----------LFNEQEICDLTSYVVSE
>gi|313681574|ref|YP_004059312./90-171
QMGNCVACHNIEG---AKGYGNIGPDLTNY-----------KELYM--------DSGVRNPQFMYQKIADPRLDN-PK--
SAMTVN-----------LANG-----------LMNEREVCDLVSYITAV
>gi|237756095|ref|ZP_04584671.1/79-173
AKGNCVACHCAKD---AKGCGNIGPDLTGYKNGLFKAPGYRGEEKT--------------LDWLYQKIADGRILI-PKDL
ENVPYYHIMTVQ-----LTTG-----------QLTYEEVCQLTAYLLSQ
>gi|225851421|ref|YP_002731655./79-173
KTANCVACHCAPG---SVGCGNIGPDLDHYRTTLMKAEYIDGSKKS--------------IDWLYQRIADYRVQI-PSEF
KDHPFFNTMTVN-----LTTG-----------KLNYDQVCALAAFLLSL
>gi|126732565|ref|ZP_01748363.1/57-155
GKGNCIACHEVTALEDAPFHGEVGPALNGV-----------GGYRT--------------EAELRGIVANPKMTF-EG--
TVMPAFYKTSGFTRPGDGYTGKA-AQ-GEIEPILSAQEIEDVVAFLMTL
>gi|56695894|ref|YP_166245.1|/60-158
KHGNCVACHQVGALADVPFQGEIGPALDGA-----------GSRWS--------------EAELRGLVANAKLTF-EG--
SMMPSFYRIDGYIRPGDAYTGKA-AK-GALTPLLSAQEIEDVVAFLATL
>gi|149204415|ref|ZP_01881382.1/42-140
ALGNCVACHQITEMSDVPFHGEIGPMLDGT-----------GSRWS--------------EAELRGIVANAKMMF-PD--
SLMPSFYRTDGYTRPGNAFTGEA-AD-STFGPLLTAQQVEDVVAYLVTL
>gi|84686972|ref|ZP_01014855.1|/53-153
SAGNCISCHAAEAYADVPFHGEVGPVLDGA-----------GDRWS--------------EAELRGLVVNAKMAF-DG--
TVMPAFYKTDGFTRLGDAFTGKAWPEGEPVTPLLTAQEVEDVVAYLKTL
>gi|119386855|ref|YP_917910.1|/57-155
ALGNCVACHQIGALPDVEFPGTIAPPLDGA-----------ADRWT--------------EAQLRGIVANAKMTF-EG--
TFMPAFYKGEGFVRPGDGFTGKA-GT-EPLAPILNAQQIEDVVAFLVTL
>gi|83954855|ref|ZP_00963533.1|/57-148
KQGNCLACHMNSDMAEESFHGEVGPPMDGV-----------ADRWT--------------EAELRGIVTNSKMMF-EG--
TIMPAFYVDSGYTRPLDDFAGKS---------ILTAQQVEDVVAYLMTL
>gi|90417857|ref|ZP_01225769.1|/60-152
GLGNCLACHMVQDLESELFHGNVGPALDGV-----------AERWE--------------PGQIRAIVANAKEVF-GE-Q
TIMPGFYTLDVGVDVAEKFQGKT---------ILSAQQVEDVVAYLATL
>gi|163761443|ref|ZP_02168516.1/52-144
RLGNCLACHANADMADQLFHGNVGPEMDGV-----------ASRWE--------------EPMLRAILVNSKEIF-TE-E
TVMPGFYSLEVGKDVREESIGKT---------ILTAQQVEDVLAYLGTL
>gi|146340163|ref|YP_001205211./43-134
TLGNCLACHQVTSLKSEEFHGEFGPSLDGV-----------ATRYN--------------TAQLRLIVADPKRIF-TD--
TVMPAFYKNDGLNRVRPEFVGKP---------VLTAAQVEDVVAYLETL
>gi|220927399|ref|YP_002502701./72-160
RRGLCTLCHAGLG---GRAEGDVGPNLARV-----------GARLT--------------PGQLRLRLVDGRVLN-PD--
TIMPSYYRVEGLTRVGAAWRGKP---------ILEADEIEDVIAYLATL
>gi|146339425|ref|YP_001204473./46-136
RSSTCILCHSGPF-PEARFQGDLAPSLAGA-----------GSRST--------------PAQLRLRLVDAPSIK-PG--
TIMPSYYRVDGLTRVGSAWRDKP---------ILTAVQIEDIVAYLATL
>gi|171056757|ref|YP_001789106./55-145
QTGLCLLCHRGPF-PEVRFQGNLAPDLGGA-----------GARWS--------------AAQLRLRLVDGRRLD-PQ--
SIMPAYHRVDGLVDVAAAWQGRP---------LLSAQQIEDVVAYLVTL
>gi|298291959|ref|YP_003693898./46-136
QKSLCVLCHSGPF-PNPHLQGNLAPDLKGI-----------GARLS--------------EDEIRLRVTDMKRLN-PD--
SLMPTYVASQGSERVGTAWRGRP---------ILAEQEIEHIVVYLASL
>gi|145589340|ref|YP_001155937./55-145
QTGLCLLCHSGPF-PEERFQGNLAPELSQS-----------VARYT--------------VPQLRARIVDASYFN-SQ--
TIMPAYYRTEHLNRVAPKFAGLT---------ILNEQEIEDVVAFLATL
>gi|117926991|ref|YP_867608.1|/52-142
SKGNCIACHWLPE---ATFPGNAGPNLYEA---------IRHNERS--------------TAWIRQKIVNPKVDN-PD--
TLMFTFYDSTGKQNLLKAWEGKP---------VLEAQEVEDVIAYLLSL
>gi|319956119|ref|YP_004167382./41-117
KIGNCLACHAANG-KNINNPGNLGPKLQGL------------SAWP--------------EEALYAKVYNPYTTN-PI--
SAMPPF-----------GLNG-----------VLDDHQIKAVVAYLKTI
>gi|157736820|ref|YP_001489503./40-116
TQGNCIACHAING-KTLDGPGSMGPVLQYL------------SLWP--------------EEALYDKIYDPYISN-PI--
SAMPAF-----------GKNG-----------WLSDDEIKALVAYLKTI
>gi|296273346|ref|YP_003655977./39-117
NLGNCLACHAVNG-KKIDGPGSMGPKLTGL------------AYWD--------------DKTLYDTVFDIYSAR-GLTN
TSMPAF-----------GKVG-----------WLSDSQIKAVVAYLKTI
>gi|171060449|ref|YP_001792798./90-178
NGGNCYNCHQISK--SEISYGTIGPSLYQY-----------GKLRG--VSDPASAAAKPIVEYTWGKLWNSRAYN-AC--
SQMPRA-----------GHNG-----------VLDEQQIRDIMALLLDP
>gi|171463709|ref|YP_001797822./90-171
IGGGCYSCHQIDP--KEISYGNIGPSLTGY-----------GKMRG---------YSPEVVAYTWNRINNSKAYN-AC--
SNMPRF-----------AHFK-----------LLNEQQIQDVIALLLDP
>gi|311108587|ref|YP_003981440./89-170
NGGNCYACHQMTK--AEISFGNIGPSLYQY-----------GKLRG---------NSKEMVAYTWNKIYDSHATM-PC--
SNMPRF-----------GAAG-----------ILTEQQLKDVMALLLDP
>gi|220916776|ref|YP_002492080./89-170
SGGNCYACHRLSK--QEVSFGTLGPSLYQY-----------GKVRG---------QGEAMQRYTYAKIFNPQAFT-AC--
STMPRF-----------GHHA-----------ILTEEQIRDLVALLLDP
>gi|296136732|ref|YP_003643974./90-171
SGGNCLACHEMVK--NDPSQGNIGPSLVDY-----------GKLRG---------NSEAILKYTWGRIYDSSAYN-AC--
SWMPSF-----------GAHH-----------ILTEQQMKDVMALLMDP
>gi|154245470|ref|YP_001416428./87-168
SGGNCYACHQMDP--REVSYGTLGPSLTNY-----------GADRK---------FAPADAKAAYAKVFNPQAAF-AC--
SPMPRF-----------GHNG-----------VLSEQQIKDVVAYLFDP
>gi|39937529|ref|NP_949805.1|/88-169
HGGNCYACHQMAK--SEVSFGTLGPSLTHY-----------GKDRN---------YTEAEIKQAYTKIYNSQAVV-PC--
SNMPRF-----------GTNG-----------FLTEQQIKDVMAFLFDP
>gi|300022232|ref|YP_003754843./88-169
NGGNCYACHQLSK--TELSYGTLGPSLTNF-----------GKDRE---------FDLDAAKAAYAKVYNAQSVN-AC--
SNMPRF-----------GAHK-----------FLTEQQIKDVVAFLFDK
>gi|328544316|ref|YP_004304425./88-169
IGGNCYACHQLAP--SEVAYGNLGPSLTGY-----------GKGVE---------VDDALIKATYDKIYSSQSVL-PC--
SQMPRF-----------GATG-----------FLTPEQIRDYVAMLLHP
>gi|71908742|ref|YP_286329.1|/92-173
RGGNCYACHQLAK--QEVAYGTIGPSLQHF-----------GKIRG---------NSEEIIKYAYDKIYNSNAFT-AC--
TNMPRF-----------GLHS-----------WLTPEQITHIVAFLIDP
>gi|163781718|ref|ZP_02176718.1/84-161
RRGNCYACHCGDP--KILACGNIGPSLRGY-----------AKRGI-------------DPKDTYIRIYNAWAVN-PC--
SVMPRL-----------GYHG-----------VLKPEEIADIVAYMHDP
>gi|55981387|ref|YP_144684.1|/76-156
RKANCFSCHFGSP---EHLGGDVGPSLEKY-----------GLKRG---------QSEAVQRYTYEVIYNSWAYF-PC--
TVMYRF-----------GAQG-----------LLTPEEIADVVAYLLDP
>gi|46199353|ref|YP_005020.1|/76-156
KRGNCYACHQGDP--REVAYGTMGPSLTGY-----------GQRGL----------SEAVVRYTYEKIYNAWAFV-PC--
SLMYRG-----------GVHG-----------YFTPEETADLVAYLLSP
>gi|289548536|ref|YP_003473524./92-181
KGGNCYACHLIEK---GKPGGTMGPSLTGY-----------GKRYGITKENMNTPETIEKQKTVYNIVYNSWSVF-PC--
SAMPRF-----------GYHG-----------VLSPEDVMNVVTFLLHP