HMM Seed Alignment: TIGR04519

Download Alignment

>gi|551212716|ref/27-64
FGYWKSLKDISS-SDDY------DNYLKQSEHHED-----------NGLSRRNFLS
>gi|551211081|ref/27-64
FGYWKSLKDISS-EEDY------KRFLKQSEHNID-----------NGLSRRNFLS
>gi|521069647|ref|WP_020401598./17-58
TTYWKSLKELAN-NQEY-QKFAEREFPENATELTD------------GVSRRGFLR
>gi|94970030|ref|YP_592078.1|/36-79
PQYWRSLDELSN-TDEF-QEMLHREFPRQASEWVD----------DGGSSRRDFLK
>gi|162455867|ref|YP_001618234./16-57
KTYWRSLDELSG-SPDF-VDALGREFPPAAFEPPE------------GVGRRTFLS
>gi|376316884|emb|CCG00263.1|/5-58
KKYWKNLAELNSANDNVFEKLRNDEFTQEIPVDEV--LTDPNNLENSNTSRRDFLK
>gi|493983997|ref|WP_006926859./10-51
KQYWRSLEQLAD-TPEF-KKFVAAEFPESVEEVAD------------GVSRRKFLG
>gi|490718695|ref|WP_004581260./22-63
VGYWRSLAELAQ-TPEY-VDAASGEFGGEEKPWEA------------PVSRRNVLK
>gi|116619629|ref|YP_821785.1|/23-68
RDYWRSLDDLAA-TPEF-QDLLEREFPRQAVGWAD--------DEDANEGRRNFLK
>gi|494037417|ref|WP_006979543./15-57
KKYWRSLGQLSD-TPEF-RGWLEREFPQGASEMQG-----------GDLSRRNFLK
>gi|495742259|ref|WP_008466838./5-56
KKYWKSVEELEN-SSIV-EALRNNEFVEEIPTDEF--LGNADALSTSGTSRRDFLK
>gi|496143626|ref|WP_008868133./5-57
KKYWKSEAELSA-NDAMIETLKQNEFVEQIPTGEF--LSDKQTLATSNTNRRDFLK
>gi|294053559|ref|YP_003547217./9-49
PRYWKSLDDLAE-TPAF-KDWVKDEFPEGADGMEG-------------VNRRQFMK
>gi|328951685|ref|YP_004369020./17-58
RAFWRSLEELAE-SEAF-QDFLKHEFPRQFFPWEA------------SLDRRRFLK
>gi|292492628|ref|YP_003528067./24-65
RSFWKSLEELAG-SEEF-KKFLYEEFPYFRELSQA------------SLSRRDFMR
>gi|430744479|ref|YP_007203608./26-67
PRYWRSLEELAE-TEEF-QSFLDREFPHGAPELVD------------ATSRRNFLK
>gi|498268018|ref|WP_010582174./50-91
NRPWRSLAELSE-TEEF-IDFLHREFPRQASEWPD------------SASRRSFLK
>gi|219850233|ref|YP_002464666./21-62
PQFWRSLDQLAD-SPAF-RELVEREFPRGASEMSD------------GMSRRTFLK
>gi|322433726|ref|YP_004215938./59-100
KRFWKNLEELSA-TQEF-NDMLGEEFPRQAGEWTD------------AVSRRGFLK
>gi|320109200|ref|YP_004184790./53-94
KRFWTSLDDLAE-DPGF-EAMLREEFPRQASELTD------------GVSRRGFMK
>gi|379729637|ref|YP_005321833./8-50
NKVWVSVEDLTQ-DAEF-IKAQQNEFPASEEQTEG-----------EGPSRRDFLK
>gi|42523112|ref|NP_968492.1|/13-57
TKYWNSLEQWSN-DPEF-NKIASTEFQSSPLRESD---------DEGGWARREFLK
>gi|522205912|ref|WP_020713379./54-97
RRFWKNLDELAD-TPEF-HELMREEFPRQSGANEW----------VDSVSRRGFLK
>gi|551215461|ref|WP_022843403./43-86
RRFWKNLDELAE-TDSF-QQLMQEEFPRQAGAGEW----------VDAVSRRGFLK
>gi|408491333|ref|YP_006867702./5-57
KKYWKSAEQLEDNSPLV-ESLEQNEFADHIPSDEF--LGDEENLEGTQTSRRDFLK
>gi|340622665|ref|YP_004741117./5-57
KKYWKSVEELNSESPIV-DTLKQNEFVQEIPVDEF--LGDKQTLQNSSTTRRDFLK
>gi|498207953|ref|WP_010522109./5-56
KKYWKSVEELSD-SSMV-EALKQNEFSEDIPVEGF--LEDKQVLDESSTSRRDFLK
>gi|510821500|ref|WP_016194951./5-54
KKYWKGLEELKS-SSDF-VEKNKNEFAEEIPLEDV----LSEGVLNSVTPRRDFLK
>gi|494491924|ref|WP_007281393./10-50
KHYWRSLDELAE-SPEF-KEHVEREFPEGASELGD-------------FSRRGFMK
>gi|522210829|ref|WP_020718153./28-68
KKYWRSLDELAD-TKEF-REWVTKEFPGGVDMLEG-------------SSRRNVLK
>gi|521464747|ref|YP_008151898./20-60
KAYWRSLADLLE-SPEL-REAAARELPGGEGGPGA-------------VSRRGWLK
>gi|345302088|ref|YP_004823990./19-60
KRLWRSTADLRR-DPEW-VKLAHDEFMPGVAEPPS------------GTSRRQFLQ
>gi|495714085|ref|WP_008438664./20-57
QAYWRGLEALAA-SPET-QALMEAEFPGAAP-LMD---------------RRSFLQ
>gi|488697276|ref|WP_002621313./19-56
PRAWRSLEELHR------ESAASREFPPGATEPPQ------------GLERRRFLQ
>gi|338535148|ref|YP_004668482./21-58
PEPWRSLEARQD------SAPAPGEFPLDADAPPQ------------GLSRRVLLE
>gi|494656163|ref|WP_007414107./26-67
REYWRSLEEVAQ-TPEF-EALLHREFPALASELTD------------EVSRRSFLK
>gi|493610776|ref|WP_006563154./26-67
MQFWRSLDDLAD-TPAF-HELLEREFPRGAAELHD------------PISRRTFLK
>gi|156741447|ref|YP_001431576./23-64
REFWRSLDELAD-TPAF-NELLKREFPRGAAEWRD------------PASRRNFLK
>gi|108763060|ref|YP_634214.1|/53-94
QTYWRSLEEKLG-TPDY-LEATRPEFPVGADLAPT------------GFARREFMH
>gi|390956211|ref|YP_006419968./55-96
KRFWQSMNELSD-APGF-EDMLHEEFPRQASELTD------------GVSRRGFMK
>gi|517442047|ref|WP_018612896./4-52
KKYWQSFGELNK-TNAY-KSAAQDEFQEELPFEAD-----DKGLLEVKTPRRDFLK
>gi|375149655|ref|YP_005012096./4-53
KKYWQSFGELNN-SEAY-EKSISNEFKEELPFESA----DKKGLDVSPASRRDFLK
>gi|471262479|ref|YP_007645334./27-75
RTYWKSFEDLND-TPEF-RAALATEFMSSPLREES-----ANEGDGDKWHRREFLK
>gi|497646446|ref|WP_009960630./14-58
RRYWRSLGEYSS-TPEF-TEKVGREFDPSISLESA---------EERENSRRDFMK
>gi|493849208|ref|WP_006796173./5-57
KKYWKSTAQLDE-SNEIVKNLEQNEFATPIPTEEF--LGNNEVMEESSTTRRDFLK
>gi|443243013|ref|YP_007376238./5-57
KKYWKSTAQLDD-SNRIVKDLEQNEFVSSIPTDEF--LGNDQAMEESNTTRRDFLK
>gi|537740291|emb|CDF77934.1|/5-57
KKYWKSVEELNE-DSSIVEALKQNEFVAEIPADEF--LGDKATLESSSTSRRDFLK
>gi|295132455|ref|YP_003583131./5-56
KKYWTSVEELKG-SSIV-ETLKQKEFAEEIPVDEF--LGDKESLSNSKTSRRDFLK
>gi|260060672|ref|YP_003193752./5-57
KKYWKSEAELSP-DNSIVEKLKQNEFPEKLPEDAF--LGDKEQLAGSQTSRRDFLK
>gi|495784164|ref|WP_008508743./5-54
KKYWKGLEELNN-SPEF-VELNKNEFAEPIPFEDI----LSGTGLMNKTPRRSFLK
>gi|497266411|ref|WP_009580628./6-51
KTYWKGIEQLSN-DPEF-VKNADREFPEFLPINGN--------SEGGGSSRRDFLK
>gi|499127832|ref|WP_010856649./6-51
KTYWKGLEQLTN-DPEF-VKNADREFPENLPLHKT--------NDDGTPSRRDFLK
>gi|496323638|ref|WP_009032816./6-49
KTYWKGLEELTN-DPEF-VKNAEREFPEAPSVLGG----------EEGSSRRDFLK
>gi|522058218|ref|WP_020569427./6-50
NKIWLGTDQLES-SQEY-IKATDNEVGAPEAMSEN---------PRLEASRRDFLK
>gi|495875219|ref|WP_008599798./20-60
RAFWRGLDDLSS-TPEF-RRFLTREFPALEPPPSG-------------PSRREALK
>gi|517276449|ref|WP_018465267./17-57
RAFWRSLEELAG-SPEF-QQKLTEEFPWRAWGLPE-------------LDRRRFLQ
>gi|495375363|ref|WP_008100075./17-57
PRYWRSLDELSQ-TPEF-LAEVEREFGPEASEMND-------------VDRRHFFK
>gi|325111191|ref|YP_004272259./2-43
AKYWRSLEELYE-KPAF-QEYLHREFPEAASLVPE------------GVSRRRWLQ
>gi|162452792|ref|YP_001615159./19-59
KAYWRSLAELLE-SPEL-LEAAARELPASAGNPAT-------------MSRRRWLE
>gi|517848428|ref|WP_019018636./22-63
PQYWRSLEELAE-SESF-GEFLNQEFPRLGAVWEA------------PMDRRGALK
>gi|512438669|ref|WP_016414489./22-63
PTYWRSLEELAD-DEAF-SEFLADEFPGHDSVWAA------------PLDRRRVLK
>gi|219848433|ref|YP_002462866./26-67
KQFWRSLDQLVD-TPAF-RELIAREFPQGASELAD------------PVSRRTFLK
>gi|518991746|ref|WP_020147621./13-54
PAYWRSLDELTE-TPEF-RQWVEKEFPESTLEAPS------------GQSRRDFVK
>gi|488698869|ref|WP_002622890./51-92
KTYWRSLEEKLG-QPEY-LESVRPEFPEGADLPPT------------GVARRQFMQ
>gi|488723801|ref|WP_002647376./3-44
KKYWRSLGELHS-TPEF-EEVLHREFPVAASEYPE------------GVSRRRWMQ
>gi|494543804|ref|WP_007328379./24-66
PQYWRSLSEYRQ-DDTFVNEFLHREFPVAASEFPE------------GVSRRRWMQ
>gi|325955354|ref|YP_004239014./5-56
KKYWRSFEELTD--SNLSEQLSTNEFAEDIPVDEF--LGNTNAMENKKTSRRDFLK
>gi|518819250|ref|WP_019975204./5-56
KNYWKSFEELTD--NTLNEKLTTNEFAEEIPVDNF--LGNDNAMENSQTSRRDFLK
>gi|392390726|ref|YP_006427329./5-56
KKYRGSIEELYN--DSLTEKLAANEFAEELPVDEF--LGDKKTMESSKTSRRDFLK
>gi|256419574|ref|YP_003120227./5-51
-KYWKGLEELHN-TKEH-QEIVNNEFREDLPFEES------ESLLNATTPRRDFLK
>gi|496345622|ref|WP_009054800./6-47
KTYWKGVEELTN-DPAF-IKNADREFPELPTQEEN------------TPSRRDFLK
>gi|586956981|gb|AHJ98715.1|/5-53
PKYWKGIEELEN-SPEF-VKNALTEFADFLPVKET-----HGTSDATVAPRRDFLK
>gi|108762977|ref|YP_633696.1|/6-52
PKYWQSLAERAG-DLGA-LAQTQDEFAEPLPVGVA-------ATPPDANSRRDFFK
>gi|495647641|ref|WP_008372220./22-59
EHWWRGLEALAD-SAQA-QAWVAAEFPGLAPT-LD---------------RRRFLQ
>gi|544787333|ref|WP_021209772./21-58
PRYWRSLEELAD-EPAF-AAFVDAEFPSIAP----------------EMDRRRFLQ
>gi|320102332|ref|YP_004177923./50-95
KAFWRSLEEWAD-TPEF-REYVAKTAPEAAEQLVR--------SEAAGVDRRRFLQ
>gi|517867342|ref|WP_019037550./5-57
KKYWKSAEQLKD-DSPLVEALEQNEFAEHIPADEF--LGDKDKLESSQTTRRDFLK
>gi|390953659|ref|YP_006417417./5-57
KKYWKSVEELNE-DSAIVKALQDNEFVTEIPTDEF--LSNKGALESSSTTRRDFLK
>gi|551198425|ref|WP_022826491./5-57
KKYWKSVEELNQ-DSSIVEALRNNEFVEAIPTDEF--LGDESTLAASSTTRRDFLK
>gi|517774565|ref|WP_018944773./5-56
KKYWKSVEELKG-SSIV-ETMNKNEFVQEISTDTF--LGDKETLENSSTTRRDFLK
>gi|298206849|ref|YP_003715028./5-57
KKYWKSVEELEDSNPVV-ETLRQNEFPSEIPTDDF--LGNDKTMENSSTSRRDFLK
>gi|496279906|ref|WP_008991944./5-57
RKYWSSVEELKP-NSSIADTLKQNEFVEEIPTAEF--LGNEEALGASSTSRRDFLK
>gi|120434530|ref|YP_860225.1|/5-57
KKYWKSVEELNE-DSSVVETLQHKEFAEDIPVEDF--LGDKENLGDSKTSRRDFLK
>gi|518500499|ref|WP_019670706./4-56
KKYWKSEAELNP-NDSIVETLRQNEFPEEIPVDDF--LGDKKNLSASTTNRRDFLK
>gi|327403178|ref|YP_004344016./5-55
KKYWKGLDELHE-TPAF-VESRDREFSPSVSVDEF---LGDDQLAETSTARRDFLK
>gi|325105337|ref|YP_004274991./5-54
KKYWKGLEELNK-TPEF-VEKNKGEFAEPLPIEEV----LEGSGLKASTPRRDFLK
>gi|515826285|ref|WP_017257038./5-54
KKYWKGLEEVNN-TPEF-AEHSKNEFAEPIPVEEL----LEGSGLNSVAPRRDFLK
>gi|387792486|ref|YP_006257551./6-56
KTYWKGLEELNP-TPEF-EALQKREFAEDLPIEEI---LSGKASDNSVMPRRDFLK
>gi|518427838|ref|WP_019598045./6-50
KTYWKGLEQLTN-DPEF-VKHADKEFPGYLPTNNS---------EETGSTRRDFLK
>gi|516339920|ref|WP_017729953./6-54
KRYWKGLEQLAN-DPEF-IKKNQNEFADYLPINSN-----KGNGGEGGPNRRDFLK
>gi|517156224|ref|WP_018345042./6-52
KVFWKGVEELGN-SPEF-LKNAQNEFPEFLPLKNS-------SEESNGTDRRDFLK
>gi|338212428|ref|YP_004656483./6-56
KRYWKGLEELRN-DETF-VKNAHNEFGSFEAGDST---QYKSIVDGIGSDRRDFLK
>gi|497225386|ref|WP_009539648./14-54
RDLWLSLEHRAD--PEGAAAWVEQEFGPSARHALE-------------SDRRTFLK
>gi|516724838|ref|WP_018066871./18-58
KALWLGLEQLSA-TDEF-NAFLTSEFPALQAMGEG-------------VTRRGLLK
>gi|563451467|ref|WP_023677091./25-65
PELWRSLDELAD-TPEF-RRFVDAEFPSIAERIPR-------------LDRRTLLK
>gi|494836706|ref|WP_007562806./20-60
PRFWRSLDAVAD-SPEF-RDYLAAEFPSAARLAAS-------------PERRGFLK
>gi|182415742|ref|YP_001820808./18-58
PKYWRSLDELAA-TPGF-QEQLHREFPEGASELNG-------------VDRRHFLK
>gi|383459973|ref|YP_005373962./24-65
VRAWRSLEEWHAGGPG--REALSREHPPGAMLPPE------------GVARRTFLQ
>gi|488859673|ref|WP_002771961./12-57
RKYWQSLEERV--LPEA-DAWRSPEFEQSRNEMAD-------EAEKQKFSRKDFMK
>gi|337270868|ref|YP_004614923./26-67
RDMWRSLDEIAG-TVEF-RRFVEAEFPAIAERLPA------------KPNRRTLLK
>gi|269926700|ref|YP_003323323./16-57
KQFWRSLDELAD-SEEF-KQYLHREFPERASEWLS------------SMSRRDFIK
>gi|297623262|ref|YP_003704696./33-74
QAYWRSLEELAE-TPEF-EEFLHKEFPRQAAPMLS------------AVDRRGFIK
>gi|498273299|ref|WP_010587455./10-51
KTYWRSLGELAA-TPEF-TEFLHREFPVAASEFPQ------------SMSRRRWLQ
>gi|517456200|ref|WP_018626974./3-52
NKYWQGFGELND-SEKF-QKRVDDEFRDELPFEDF----DSKGLLDAKAPRRDFLK
>gi|517288510|ref|WP_018477328./5-55
PKYWKGIEELEN-TPEF-AKHAHNEFPEFLPINET---NGAGESSGVTAPRRDFLK
>gi|442323068|ref|YP_007363089./6-52
PKYWQSLAQRAT-DGTG-LEPGHNEFAEELPVGVA-------AVPPDASSRRDFFK
>gi|517799602|ref|WP_018969810./18-63
TKVWRSAGELED-THGL-RQWLEREFPRAAETMID--------EDDRETSRRSFMK
>gi|498204328|ref|WP_010518484./5-57
KKYWKSEAELDP-NNSIVETLKQNEFAEPIPVDDF--LGDKQTLEESSTTRRDFLK
>gi|497822854|ref|WP_010137010./5-57
RKYWKSVEELNE-NSSIVASLEENEFNEGQAPESF--LGDKETLESSNTTRRDFLK
>gi|326798962|ref|YP_004316781./5-54
KKYWKGLEELEQ-TPAF-VKNSKGEFAESLPIENV----LNEAGLSTKTPRRDFLK
>gi|527056849|ref|WP_020888437./6-51
KTYWKGLEQLTN-DPEF-VKNADQEFPGFTSKSNQ--------KEDGSSTRRDFLK
>gi|313677766|ref|YP_004055762./5-52
KTYWKGTEQLTN-DPSF-VKNAEKEFPEYLPINDK------KESNGGSPSRRDFLK
>gi|544919002|ref|WP_021328478./9-57
KKYWSTLSEFHQ-DAEF-KKLKKEEFLSKPQSFFE-----SNGNNDTTFSRRDILK
>gi|578019655|gb|AHI07977.1|/24-63
KRYWRTLSELAD-TPEF-QLWVEDEFPNRRSIMQI--------------NRRDLLK
>gi|312130892|ref|YP_003998232./6-45
KRYWKGIEELKN-DINV-VKNADREFNSEEIEGGT--------------YRRDFLK
>gi|494605406|ref|WP_007363654./15-55
RQYWRSLDELAA-TPGF-KDQLEREFPEGASTLAG-------------VDRRQFFK
>gi|436834456|ref|YP_007319672./6-53
KRYWKGVEELRN-DATF-VKNAQSEFAEPTGNDLQNLLDGTN------APRRDFLK
>gi|512550289|ref|YP_008088195./24-65
KKYWRVLEELAD-TPEF-REVVANEIPDVTRSIDL------------HMDRRQFLT
>gi|383458570|ref|YP_005372559./59-100
KTYWLGLEEKLA-TPEF-LEETRPEFPVGADLPPT------------GFARREFMQ
>gi|408673161|ref|YP_006872909./6-47
KKYWKGVEELKN-DIGF-VQNANREFNLDDIETVE------------PTHRRDFLK
>gi|510825121|ref|WP_016198289./5-56
KIQFRSIHELKD--PTLTNKLAQKEFAEEIPVDEF--LGNEEKMNGSSTSRRDFLK
>gi|255536541|ref|YP_003096912./5-55
KIQFRSIHELKD--PGLNAKLAQKEFQDEIPVGDL---LGQKASSESGSSRRDFLK
>gi|518995643|ref|WP_020151518./18-61
TTAWRSVGEKEG-AESF-RNLLDKEFPQGDTLDEE----------EQRVSRRSFTK
>gi|516454235|ref|WP_017843147./5-55
KVYWRGTEELEK-APAF-VKGAEKEFSEELPIDQF---LANKDLDSTNTSRRDFLK
>gi|284040499|ref|YP_003390429./6-57
KRYWKGVEELRN-DATF-VKNANSEFANPDLSESS--NDLDGLLGGSNTQRRDFLK
>gi|518833636|ref|WP_019989556./6-50
KRYWKGVEELRN-DAQF-VKNANTEFNNATTQEDL---------LGDNPQRRDFLK
>gi|332666785|ref|YP_004449573./6-55
KEIWIGTDQIAN-DPIY-NEITNQEFYERPISEQL----ADDKTMDLNANRRDFLK
>gi|497449918|ref|WP_009764116./22-61
PRLWRSLEELAD-LPEI-RRYVEAEFPDIAQASAI--------------DRRTLLR
>gi|489063981|ref/11-56
KSLWQSYELRGT-SRE--RELQKQEFYKSPDPLIA-------KIKKGDFDRKTFLK
>gi|497226751|ref|WP_009541013./26-67
PRLWKGLEEAAD-EPAF-RTWLDAEFPAAAQLLDQ------------PHARRTVLR
>gi|522203950|ref|WP_020711417./44-85
TAGWQGFDHAAA-RPGF-DRRMEQEFPTHAGEWVD------------PVSRRGFMK
>gi|494141173|ref|WP_007080924./28-67
PRFWRALEELAD-DAHW-RDTLHTALPQLAALAPM--------------DRRRFIK
>gi|498098080|ref|WP_010412236./11-57
KAHWLSFELRDK-AEET-KELQRSEFFTSPDPIIA-------RIKSGEFDRKTFLK
>gi|515127637|ref|WP_016756499./11-57
KAHWQSYDLRDK-DEEV-KEMQKAEFFTSPDPLIA-------RIKSGEFDRKSFLK
>gi|522022879|ref|WP_020534102./6-51
NNVWIGTEQLNN-NQEL-AQSEKSEFAELAAEGGV--------ETRLESNRRDFLK