HMM Seed Alignment: TIGR04533

Download Alignment

>gi|17227992|ref|NP_484540.1|/6-237
KFLKQKHLTTLVVLLLFLLLLTVGAVPGYLS-GRWQWKQPPSIANLKELREIRNKGLNLPGWQTVN-QIEQVIGQHKW--
-SLQIIKQTGS-----KNQALLLLLPQNGPKNQPEVEWTDVSGWGKIRWGKWDVAQSRSAEFTVTQ-PANSAENGKIPVE
AMFFRASTDQETFAVLQWYALPNGGYSSPFRWFLADQLAQL-QKTRA-PWVAVSILIPMEPLGQVETTWPLAKSIGETVQ
STLMD
>gi|427707666|ref/6-237
KVLKEKQVTYIVALALLLLLLAMGGVPSYFS-GRWEWKQPPPVTTLKELRKIRKTGLTIPGWQTVQ-QSEQQIGEHKW--
-SLQILKQASS-----QTQIILLLLPQNGPKDQPEVEWTEINGWGRLRWGKWDMAQERSLKFPVKQ-SQTSTSHPEARVK
ARFFRISTQQDTFAALQWYAFRNGGDPSPLSWFFTDQLAQW-QKHRT-PWVAVSILIPIEPFGEVENTRSLAQSLGETVQ
TTLMA
>gi|434407757|ref/9-240
KFVKQQQLSQVAALLLLLLLLAMGGIPSYLT-GDWQWKEPPPVTSLKELKQIRKVGLSLRGWQTLE-QAEQQIGEGHW--
-SWQLIKKENS-----PIQAVLLLHPQNGPRDQPEVEWTDISGWGRSHWGKWNVAQYRSAEFTVKQ-PAKSDSKAEINVK
ARFFRASTQQDTFAVLQWYAMPNGGNPSPFHWFLADQLAQL-GKKRI-PWVGVSILILMEPLGQVEKSWSLAQSLGETVQ
AALMA
>gi|427715377|ref/6-237
KLLKGNQWTQVVVLLSLLVLLGVGAVPGYLT-GQWQWQKPSPVSHLKELRQIRKTGLTLPGWQTVE-QTEQQVGEKKW--
-SLQVIKKPDL-----PTQPILLLLPQNSSTAQPEEEWSEINSWGKSRWGKWDIAQYRSAEFTFKP-PSGLGSNTTTKID
ARFFRASTPQESFAVLQWYALPDGGHPSPLRWFVADQLAQW-RKHRT-PWVGVSILIPIEPLGQVETAWSLAQSLGETVQ
VALMA
>gi|515377556|ref/5-236
KFFKKRYFSHGVALLLLLLLLALGAVPGYLT-GNWQWRQPPPVTNLKQLRQIRQTGLTLPGWQTIE-QAEQQIGEHKW--
-SLQLLQKQGA-----NTQAVLLLLPQNGPKNQPQVEWTDINSWGRLRWGQWNLAQNRLVEFTAKQ-PQENALTTETKVR
ATFFRAATTEQTFAVLQWYAWRNGGDSSPLQWLLADQVAQL-HKQRA-AWVAVSILIPMEPLGQIETVWSEVKSVGETVQ
AALMV
>gi|515888327|ref/6-231
KFLKERQFSQVVALLLLLLLLVIGATPGYLT-GRWEWREPPRITSIKELKHLRQKGLTLPGWQTIE-QRQQEIGGRKW--
-SYQVIHKQGD-----QTKAVVLLLPQTGSRDLP-VEWTEINSF----W-QWQVAQYRSANFTVKQ-PQGAGSNTETKVE
ARFFRGSTNQQTFAVLQWYAWFNGGNSSPLPWFVVDQLAQW-HKKRA-PWVAVSVLIPMEPLGQVEKTWNEAKSVGQTVQ
TALMT
>gi|427734350|ref/6-234
RFFKERQFLQMAALVLLVLLLAIGALPGYLE-GKWQWKQPPPIINLGEIKKLRKTGLAIPGWKITQ-QQEQMLGSGKW--
-SLQIMEKDGG-----KQTAILLLLPQNGPKDQPQVEWTEIDSWGRMQWGEWQVAQYRQAKFAVKQ-PQ---VKEETKVK
ARFFRAHSKQQTFAALQWYAMPNGGHFSPLNWFWADQFAQW-HKQRV-PWVAVSLFIPMEPLGEVETTWEQVKSIGETVQ
TRLFN
>gi|518323098|ref/6-237
KLVKERQYPQLAALLLLILLLVFAAVPGYLS-GKWQWKQPPAIPTLKELRQIRSQGLNVPGWQTSE-QRELTIGERKW--
-SLQTILKVGADNTDNKNKVILLLLPQNGPAEQPQVEWSEVNSF----W-QWDTAQERDVEFTVKP-PAGSTVKNDVLVK
ARFLRGSTKQQTFSVLQWYSWSDGGNPSQLKWFLADQSAQW-HKHRA-AWVAVSVQIPMEPLGQIDTTWEQAKSIGQTIQ
TRLMQ
>gi|428301390|ref/6-225
RLVKERQFPQIVALILLILLLVMGTLPGYMT-GKWQWQKLPEVSTIKELRKIHQKGLAVPGWQIIE-QKQTEVGEGKW--
-SRQVIQKDDS-----PKKAILLLLPQVGFKNHPNIEWTEMNSF----W-HWDIAQLKTVEFPLKS-GNG-------KIT
ARFFRGVTKQSTFAVLQWYAWSGTGDPSPFNWFVADQRSQL-EKKRT-AWVAVNLMIPMEPLGQADKYFSDAKSLAETVQ
EQLMV
>gi|493029296|ref/13-233
QVIKRLRFNRAIVLLLLLVIVAIGALPSYFT-GNWSWIEPPRFANFSSIKVVQIEGLEIPGWETLE-QRTVTLGGHKW--
-SYQEIKGDL------DKPVLLLLRPPNGPIDQPQVEWMDINGV-----FQWKTDSHQRLNFTVET------QSNQAQVN
ARLFRAWTQQQTFAVVQWYAWATGGHPATRQWFWVDQIAQL-KRQRV-PWVAVSIQIPMEPLGDLADAKPIAESLSQTVQ
KTLMT
>gi|493681897|ref/9-233
KLLRRYQLSKIMVLVFLLVLVGAVAIPGYAT-GRWPWTNPPILANLKQLRSLRQNGIKIPGWQVIAVQNNVQIGAHRW--
-LVEEIKND-------QTIAILLLLPQNYPKNQPQVEWLDIDGF-----HRWQTDSHRTLRFTVKL--APIPDQPPPTVE
ARLFRSWTAQQTFAVVQWYAWPNGGSPTTIRWFWEDSIARL-SNRRA-SWVAVSIILPIQPQGDIKIAQPLLKSLAESVQ
AKLIT
>gi|518317498|ref/3-228
QLPKSYQLSKIVVLLFLLMLVTAEAIPSYLK-GQWAWMKPPQVATLKELRILRSEGLTLPGGAKSA-HRNIMISGHKW--
-LVQELKYD-------EKSAILLLLTQNDHKDKPQVEWTDIKGF-----HNWKTDSYQTLNFTVDLQEKIPKSSQDISVA
AQFFRSWDQKQTFAVLQWYAQPSGGSATPSSWFWEDSKAQL-SNRRV-PWVAVCILIPLEPLADIEKARSLAIYFGQNVQ
LALMK
>gi|516324280|ref/5-237
KFPHSYPLPRVVLLLFLLVPAAIGAVPGYLT-GKWRWALPPEVKELDRLRSLRKTGIEIAGWKTLS-QETAFIGNHEWLK
QEIEILLPVGSPGSR-PQKAIILLLTQNDRADQPQVEWTDING-----WQQWQTDSDRWAKFAVAS-PQGAGV-AVAQVE
ARFFRGWTNQQTYAVLQWYAVPTGGHPAPSRWFWADRWAQL-SDRRV-PWVAVSVLIPVEPLGDIEKSRQLAESLGQSVQ
AAAIA
>gi|428212355|ref/5-230
KFLHNYSLARVALLLLMLVLFAVGAVPSYFS-GKWAWVSPPNLVNLNELRELTKTGLNLGEWETSA-PQIVKIGGRNW--
-VQQNIQEGD------RFVAGLLLLNQTGPMHQPQVEWMDIDGF----W-RWKRDSERSLTFEVNP-ESTPNPDQTIQVK
SRFFRGWTTAQTYAIAQWYSWPTGGNPAPFSWFWRDRLAQL-QGNRL-PWVAVNVIIPIEPFGEIESVRPLIESLSQNIQ
RALLE
>gi|515859773|ref/6-219
SKSLRVNLSKVVLLLIVSGLVLLGALPGYLSGGKWRWTAPPEVKVLSELRSLKKEGLNISGWQTIE-KKNVQIGDHKW--
-MYQELQDAS------QTKASVLFYPQARSIDQPQVEWTDLEGS-----QGWKTDSYRQIQI--------------DSIT
VEFHRAWTQNQTYAVMRWYAWANGGHPAPMQWFISDRLAQW-QNQRA-AWVAVSVILPIEPLEDIEPHRSRLEPLVQTVQ
STLTN
>gi|493673344|ref/15-233
TPKLQLKPSQWVLLGFLLVLFLVGTLPGFFR-GGWSWSDMPDIQALPQLQTIRREGLTVPGWETTS-HDTIQVGARRW--
-SLQSLKQN-------DTEVLLLLFPQNYYKDQPQVEWMDLQGL-----QSLRTDSHRTLQLTLDS-------PQPVTIN
ARFFRAWNPRQTYALVQWYAWHNGGSPAPSHWFFADRQAQL-RGDRA-PWVAVSIMIPMEPLGDIETVATIAQSLGQDIQ
KELMT
>gi|434399777|ref/5-225
KLQHKDSKAQIILVLLLLFLFIIGAVPGYLQGGNWNWLDLPQVENINQIRNVLKTGLVLPDWQIIK-QQEVKIGGHKW--
-SAQLMQKPN------SKPVTLLLLPQSYYLNKPEVEWMDLNGI-----ERWKSDSYRSLNFTVEN-------NSGSSVK
ARFFRAWNRQQTFAVIQWYAFPNGGSYSPAHWFWQDKLAQL-SDRRI-PWVAVCLKIPIEPLGELNDAQFTAESLAKTVQ
THLEQ
>gi|257061360|ref/16-234
KGKKKISLAQIIIVFLLSVAIAMAAIPGYLT-GKWPWADLPPVAGIQQLAKLKTTGLSLPGWTTIA-QKKIRIGGNDW--
-SIQLIEKPG------QDPITLMLMPQNYYKNHPNVEWTDIQGI-----EKWKTDSHKVLTFTTPE-------GSSNQVK
AQFFRGWNK-QTVAVVQWYAWTQGGHFASHRWFWQDQIAQL-HRQRV-PWIAVCLQIPVEPLSNVKEIEELAKSLAQTVQ
TTLDK
>gi|428203621|ref/8-220
KIKKSLSITRMALVLLLIAIAAIGTIPGYLG-GQWSWVDLPKVTQIERLKNLRDNGLTLPGWKTIE-QQQVLIGGNQW--
-SYQKLEREG------KNSVELWLMPQDYYKNHPQVEWTDLNGF-----ERWQTDSHKTLNLT-------------DRVS
ASFFRAWNR-KTYAVVQWYAWAGGGNVSSLQWFLADQWAQL-HRRRA-AWVAASLKIQIDPLSSVESTEAFAQSLAQTVR
TTLEK
>gi|307153614|ref/16-236
FLKKRIPIAHFALILLLIGVIVIGAIPGYLS-GKWSWTDIPKVANIEPLKNIRQEGLSVPGWKTLT-QKTILIGGNQW--
-SQQLMAQDQ------ENPVTVLLMPQSYYKNKPEVEWNDLNAL-----EHWKRDSDSSLKFEVKN-----ASGNKSQIT
ARFFRAWKK-TTVAVVQWYAWPGGGNYSPSSWFWADQWSQL-HQQRL-PWVAVCFSIPIDPLSNMKANQQTAISIAQTLQ
AALEE
>gi|495550695|ref/16-234
KFKKGLFTSQVVILCLLGLAIIFVAVPNYLT-QQWSWSELPRVPEVAQMRKIPETSLNFTGWTTLG-QKELSINNYPW--
-SFQVIEKSG------QKPVVIALKGQKYYKDHPEVEWVDLQGI-----EKWKSDSSQTLKFPSEI-------EPNHSIT
ARWFQAWNQ-KTYAVLQWYAWPGGGHHSPSQWFLADQKAQL-KNKRV-PWVAVSIKIPMEALGNLKDMESLAKSLGQEVQ
KALEK
>gi|488857591|ref/16-232
KVKKKLPGNYLLLLCLLLLLILGGILPNLIS-GQWSWLDQPRIDNIQKMRVIQKSGVELSDLKTID-QSQGQIGEGKW--
-SVQVVESPD------GKRITVLLKPQIYYKNQPGLEWSDINSI-----SHWNQGETTELSIPTQS---------GGKAT
ARFYRAWTQ-NTFAVVQWYAWLGGGHYDPSVWYWLDQWAQL-KRQRV-PWIAVSLLIPLEPTKELQTLTPFALNLAAEVQ
SYLEQ
>gi|515873262|ref/15-236
TTASRVSRPHLVMVILLAIVLLVGAVPQYIQ-GAWSWREPPAIPALSEMLALTRNGLELPGWTTQE-QTEVRLGGQGW--
-SGQSIIGDDH-----DRPITLLLLPQKTIRDQPDVEWVDVSGQ-----MRWKMGTMTTLTVDVQH------DGQTIPVS
ARFFQAFTEHQTFAVVQWYALDREGTPTPGRWFWLDQWAQL-RGQRV-PWVAVSLLIPVSPLRDLEDSEGLATTLIETVQ
STIMS
>gi|517209804|ref/16-230
RKLSVAAASKLAIATVLLLLVLFAALPNYLQ-GRGVGTQPIPVTNLQALRELNQDGLEVRGWTTRE-QQQISVGGHPW--
-SFQVMEQG-------EQNALLFLRPQKDTKNQPEVDWVDLSNF------FRKTRDRSSVNFTVGS----------SNIK
ARLFQAFTERQSFAVMQWYAWKTGGSPAPVDWFLADQKAQL-RDRRL-PWIAVNLQIPIDPLDDVASVQEELIDLGKAVQ
QSLLD
>gi|553742866|ref/8-224
SDAKPRSWVKWLVVVALAIIIAAAALPRYMY-AQWPWQSPPGVAQIRAIRDLKETGLAIDGWSEDF-QQKISMSGSQW--
-SVQQLTHTSEAT---SEQMVLFLKPQGQANDQPEVEWIDIKGA-----QKWQTSDHRRLRF--------------GTLN
VDAFRAWTSSQTFAVAQWYALPDGGHPAPHHWFWQDQKYQWNRGERL-PWVAVSMLIPMPPLGDVSLVYSDLERLSQLVQ
SSLRE
>gi|515868123|ref/10-233
PSPLPHRWVSLALVLVLAALAVVAIVPAYFS-GQWPWVNTPQVAQIDQLRTLRAEGLALPGWQLTS-TEPIAINGHTWTL
GEYRASSPAAP-----VQQFALLLYPQPWHSDQPQVEWVDLAGA-----QKWRIESRQWLRVAASP--------GAGPVS
AKFFRAWGDRQSFAVVQWYALPGGGNPSPSHWFWANEWSQL-TRRALTPWVAVSVLLPMQSLDAIADYQPQAQQLTALIQ
QQLTD