HMM Seed Alignment: TIGR04564

Download Alignment

>gi|491897972|ref/15-40
SGGGCSVGAF-SPLLGL--LLVPL-VLLRR--
>gi|491898093|ref/14-40
GGGGC-AVGF-APAAAM--LILPL-TLFKFRR
>gi|491899123|ref/13-40
SGGGCNAVGF-SGGTLS--LLLPLLILLKKR-
>gi|491899129|ref/16-40
SSSGC-NVGF-APMALL--LGLPL-FFLKK--
>gi|491899280|ref/14-40
SGGGC-SVGF-APAALL--LGLPMLALFVRK-
>gi|491899509|ref/14-40
SDGGCSVAGM-EPGWAF--LLLPL-AVLIGR-
>gi|491901128|ref/15-40
GSGGCSVSFF-SVASLL--LLIPL-MVLRR--
>gi|491903755|ref/14-40
GGAGCSIGGI-APAALF--LLLPL-LLFQKK-
>gi|493342899|ref/13-40
SSGGCDAGAFPAVAVLL--VLAPV-AFLRRR-
>gi|493342914|ref/14-40
GGGGCSALGT-PWGLVL--LVLPL-LFLRRR-
>gi|493342971|ref/13-40
GGGGCAALGF-LPLLAL--VVLPL-AALRRRG
>gi|493342973|ref/13-40
GGGGCSGLDL-PTLAAL--ALAPL-VALRGRA
>gi|493342975|ref/14-40
GGGGCSGLGF-APLAVL--ILLPL-LALKRR-
>gi|493343003|ref/13-40
SGGGCSAAAF-SPFALF--LLLPL-LALRWRR
>gi|493343135|ref/12-40
GGGGC-NGGFQGLLLLA--LLLPLLILARNRH
>gi|493343403|ref/15-40
SGGGC-NGGF-GPLCLL---LLPALGVLRRR-
>gi|493343478|ref/11-39
GGGGCEALGL-LPLVAL--LLIPALSLIRRRK
>gi|493343848|ref/13-40
SSGGCSAFGF-APMALL--LLAPL-ALLRKRG
>gi|493345055|ref/13-40
GSSGCSVTGL-APFLLL--LLIPA-LGLRRKR
>gi|493345083|ref/13-40
RSSGCSAFGY-GPLALL--LLAPL-SLLKRRR
>gi|493345237|ref/14-40
GGGGCDAAGL-GWWGLL--LLLPL--VARRRQ
>gi|493345271|ref/13-40
FGGGC-NAGS-APLALL--LGMPLSFLLQKRR
>gi|495984490|ref/14-39
SSGGC-SAGF-AALALI--ALLPL--AMRGKK
>gi|495984494|ref/14-39
SGGGC-SAGY-GLLALL--AIVPA--ALRRKK
>gi|495984496|ref/7-32
SGGGC-NGGV-AVLALI--AAIPL--LYRKKM
>gi|495984511|ref/15-40
SGGGC-TAGI-GALALL--ALAPL--YLRRKR
>gi|495984513|ref/15-40
GGGGC-NAGM-AALALL--ALVPL--ALRRKK
>gi|495984960|ref/15-40
SSSGC-ASGV-GALALL--ALIPL--MLKRKN
>gi|495985247|ref/14-40
SGGGC-NAGA-GALALA--ALIPL-AVRRGKR
>gi|495986296|ref/13-40
SSSGC-NGGF-GALALLAFAVLPF--IRREKR
>gi|495986551|ref/14-40
SSGGC-NAGF-AGLLLL---AVPAMVFVRKKK
>gi|495988026|ref/13-40
SSSGC-NGGY-GALMILAAALLPL--AYRRKK
>gi|495988529|ref/11-39
SSGGCNAMGA-FGMLLL--VTTPVVLVVRKKY
>gi|505369385|ref/13-38
SGGGC-DAGL-SALALM--ALLPV--VGRRRG
>gi|505369419|ref/15-40
GGSGC-DAGF-GWLLLL--AVVPV--ALRRRG
>gi|505369421|ref/14-40
GGGGC-NAGL-GWLLLLA-AAVPV--VLRRRG
>gi|505369423|ref/15-40
GGSGC-DAGF-GWLLLL--AVVPV--ALRRRG
>gi|505369857|ref/9-34
SGGGCGALDL-GGLA----LVLPL-LALRRRS
>gi|505370051|ref/15-40
SGGGC-AAGL-GSVALL--ALVPL--YIRRRR
>gi|589393402|gb|EXG78161.1|/11-38
SSGGCSAAGF-PALAAL--LATAT-MVLPRRK
>gi|589393477|gb|EXG78236.1|/15-40
SSGGC-STGL-AGLMLL--AVIPL--VLKKKK
>gi|589393509|gb|EXG78268.1|/14-39
SSGGC-SAGF-AALALI--VLLPL--AMRGKK
>gi|589393517|gb|EXG78276.1|/14-39
GSGGC-SAGY-GLLALL--AIVPA--ALRRKK
>gi|589393520|gb|EXG78279.1|/14-38
SSGGC-NGGF-AVLALL--AALPL---LRRRG
>gi|589393523|gb|EXG78282.1|/10-36
SSGGC-NAGIPTALMAI--ALIPL--LIRGKR
>gi|589393995|gb|EXG78754.1|/13-40
SSSGC-NGGF-GALALLALAVLPF--IRREKR
>gi|649574517|ref/12-40
SGGGCNAGGG-TLPAIA--LLVPAFFLFRRKG
>gi|656216576|ref/15-40
GSSGC-NTGF-APLALL--LLAPLAVLLKK--
>gi|656216963|ref/15-40
GGGGC-DMGM-APGLVL--LLLPV-ALFLKK-
>gi|656217436|ref/16-40
SGGGC-SLGV-SPLALF--LLVPV-WLLKR--
>gi|659515972|gb|KEJ91621.1|/13-39
GGSGCSAAPCGAALA----AVIPL-IILRRKK
>gi|659516002|gb|KEJ91651.1|/12-39
GGGGC-NGGL-GVLALV--ALLPLLVAKRGKK
>gi|659516729|gb|KEJ92325.1|/15-40
GGGGC-NAGL-GALSLL--ALLPL--ALRRKK
>gi|659516731|gb|KEJ92327.1|/15-40
SSGGC-NAGL-GAIALL--ALAPL--ALRRKK
>gi|659516733|gb|KEJ92329.1|/15-40
SSSGC-NAGA-GALALL--ALAPL--ALRRKK
>gi|659517303|gb|KEJ92817.1|/9-36
HGGGC-SAGA-APFALA--ALAPLALFIRKSK