JCVI: About / Bios / Harinder Singh
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Harinder Singh, Ph.D.
Post Doctoral Fellow

Research Interests and Accomplishments

Harinder specializes in machine learning approaches, annotation, database development, data mining and statistical analysis for a variety of data types. His main responsibly includes analysis of microbiome dataset using different statistical approaches. Currently, he analysing the microbiome and proteomic data of Type 1 Diabetes project. With his extensive experience in machine learning and database development, he is leading the development of prediction models and database development of forensic microbiome database (FMD).

Harinder earned his Ph.D. in bioinformatics from CSIR-Institute of Microbial Technology, INDIA. He obtained his Master degree in Biotechnology from Thapar University and Bachelor in Science from Panjab University, INDIA.

Select Publications

Singh H, Raghava GP
BLAST-based Structural Annotation of Protein Residues Using Protein Data Bank.

Biology Direct. 2016 Mar 01; 11: 4.[more]

Singh H, Singh S, et al.
In Silico Platform for Predicting and Initiating β-turns in a Protein at Desired Locations.

Proteins. 2015 May 01; 83: 910-21.[more]

Singh H, Kumar R, et al.
Prediction of Anticancer Molecules Using Hybrid Model Developed on Molecules Screened Against NCI-60 Cancer Cell Lines.

BMC Cancer. 2015 Mar 01; 16: 77.[more]

Singh H, Singh S, et al.
QSAR Based Model for Discriminating EGFR Inhibitors and Non-inhibitors Using Random Forest.

Biology Direct. 2015 Mar 01; 10: 10.[more]

Singh S, Singh H, et al.
PEPstrMOD: Structure Prediction of Peptides Containing Natural, Non-natural and Modified Residues.

Biology Direct. 2015 Mar 01; 10: 73.[more]

Singh H, Singh S, et al.
Evaluation of Protein Dihedral Angle Prediction Methods.

PloS One. 2014 Mar 01; 9: e105667.[more]

Yadav IS, Singh H, et al.
EGFRIndb: Epidermal Growth Factor Receptor Inhibitor Database.

Anti-cancer Agents in Medicinal Chemistry. 2014 Mar 01; 14: 928-35.[more]

Singh H, Ansari HR, et al.
Improved Method for Linear B-cell Epitope Prediction Using Antigen's Primary Sequence.

PloS One. 2013 Mar 01; 8: e62216.[more]

Gautam A, Singh H, et al.
CPPsite: a Curated Database of Cell Penetrating Peptides.

Database : the Journal of Biological Databases and Curation. 2012 Mar 01; 2012: bas015.[more]

Singh H, Chauhan JS, et al.
CcPDB: Compilation and Creation of Data Sets from Protein Data Bank.

Nucleic Acids Research. 2012 Jan 01; 40: D486-9.[more]