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Wu D, Wu M, et al.
Stalking the Fourth Domain in Metagenomic Data: Searching For, Discovering, and Interpreting Novel, Deep Branches in Marker Gene Phylogenetic Trees.

PloS One. 2011 Sep 01; 6: e18011.[more]

Worden AZ, Dupont C, et al.
Genomes of Uncultured Eukaryotes: Sorting FACS from Fiction.

Genome biology. 2011 May 01; 12: 117.[more]

Williamson SJ, Allen LZ, et al.
Metagenomic Exploration of Viruses Throughout the Indian Ocean.

PloS One. 2012 Apr 01; 7: e42047.[more]

Santoro AE, Dupont CL, et al.
Genomic and Proteomic Characterization of "Candidatus Nitrosopelagicus Brevis": an Ammonia-oxidizing Archaeon from the Open Ocean.

Proceedings of the National Academy of Sciences of the United States of America. 2015 Jan 27; 112: 1173-8.[more]

Roitman S, Flores-Uribe J, et al.
Closing the Gaps on the Viral Photosystem-I PsaDCAB Gene Organization.

Environmental Microbiology. 2015 Aug 26;[more]

Tanenbaum DM, Goll J, et al.
The JCVI Standard Operating Procedure for Annotating Prokaryotic Metagenomic Shotgun Sequencing Data

Stand. Genomic Sci.. 2010 Mar 25; 2(2)[more]

Seshadri, R., Kravitz, S. A., et al.
CAMERA: A Community Resource for Metagenomics

PLoS Biol. 2007 Mar 13; 5(3): e75.[more]

Rusch DB, Lombardo MJ, et al.
Draft Genome Sequence of a Single Cell of SAR86 Clade Subgroup IIIa.

Genome Announcements. 2013 Jan 01; 1[more]

Rusch, D. B., Martiny, A. C., et al.
Characterization of Prochlorococcus Clades from Iron-depleted Oceanic Regions

Proc Natl Acad Sci U S A. 2010 Sep 14; 107(37): 16184-9.[more]

Lorenzi HA, Hoover J, et al.
TheViral MetaGenome Annotation Pipeline(VMGAP):an Automated Tool for the Functional Annotation of Viral Metagenomic Shotgun Sequencing Data.

Standards in Genomic Sciences. 2011 Jul 01; 4: 418-29.[more]

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