JCVI: The Comprehensive Microbial Resource
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Peterson, J. D., Umayam, L. A., Dickinson, T., Hickey, E. K., White, O.

The Comprehensive Microbial Resource

Nucleic Acids Res. 2001 Jan 01; 29(1): 123-5.

PubMed Citation


One challenge presented by large-scale genome sequencing efforts is effective display of uniform information to the scientific community. The Comprehensive Microbial Resource (CMR) contains robust annotation of all complete microbial genomes and allows for a wide variety of data retrievals. The bacterial information has been placed on the Web at www.tigr.org/CMR for retrieval using standard web browsing technology. Retrievals can be based on protein properties such as molecular weight or hydrophobicity, GC-content, functional role assignments and taxonomy. The CMR also has special web-based tools to allow data mining using pre-run homology searches, whole genome dot-plots, batch downloading and traversal across genomes using a variety of datatypes.