Publications

Science (New York, N.Y.). 2003-03-28; 299.5615: 2071-4.
Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis
Paulsen IT, Banerjei L, Myers GS, Nelson KE, Seshadri R, Read TD, Fouts DE, Eisen JA, Gill SR, Heidelberg JF, Tettelin H, Dodson RJ, Umayam L, Brinkac L, Beanan M, Daugherty S, Deboy RT, Durkin S, Kolonay J, Madupu R, Nelson W, Vamathevan J, Tran B, Upton J, Hansen T, Shetty J, Khouri H, Utterback T, Radune D, Ketchum KA, Dougherty BA, Fraser CM
PMID: 12663927
Bioinformatics (Oxford, England). 2003-03-22; 19.5: 651-2.
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
Pertea G, Huang X, Liang F, Antonescu V, Sultana R, Karamycheva S, Lee Y, White J, Cheung F, Parvizi B, Tsai J, Quackenbush J
PMID: 12651724
Proceedings of the National Academy of Sciences of the United States of America. 2003-03-18; 100.6: 3025-6.
The independence of our genome assemblies
Adams MD, Sutton GG, Smith HO, Myers EW, Venter JC
PMID: 16576752
Developmental biology. 2003-03-15; 255.2: 290-302.
Difference in the maternal and zygotic contributions of tumorhead on embryogenesis
Wu CF, Chan AP, Etkin LD
PMID: 12648491
Vaccine. 2003-03-07; 21.11-12: 1205-12.
Immunity to East Coast fever in cattle induced by a polypeptide fragment of the major surface coat protein of Theileria parva sporozoites
Bishop R, Nene V, Staeyert J, Rowlands J, Nyanjui J, Osaso J, Morzaria S, Musoke A
PMID: 12559799
Genome research. 2003-03-01; 13.3: 327-40.
Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray
Kim H, Snesrud EC, Haas B, Cheung F, Town CD, Quackenbush J
PMID: 12618363
Chest. 2003-03-01; 123.3 Suppl: 369S.
The genetics of innate immunity in the lung
Cook DN, Wang S, Howles GP, Speer M, Churchhill G, Quackenbush J, Schwartz DA
PMID: 12628980
EMBO reports. 2003-03-01; 4.3: 257-62.
Segments missing from the draft human genome sequence can be isolated by transformation-associated recombination cloning in yeast
Kouprina N, Leem SH, Solomon G, Ly A, Koriabine M, Otstot J, Pak E, Dutra A, Zhao S, Barrett JC, Larionov V
PMID: 12634842
Genome research. 2003-03-01; 13.3: 358-68.
Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome
Liu G, NISC Comparative Sequencing Program, Zhao S, Bailey JA, Sahinalp SC, Alkan C, Tuzun E, Green ED, Eichler EE
PMID: 12618366
BioTechniques. 2003-03-01; Suppl.45-51.
Open source software for the analysis of microarray data
Dudoit S, Gentleman RC, Quackenbush J
PMID: 12664684

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