Publications

A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing.
Genome research. 2021-10-01; 31.10: 1767-1780.
PMID: 34088715
Kinetic Multi-omic Analysis of Responses to SARS-CoV-2 Infection in a Model of Severe COVID-19.
Journal of virology. 2021-09-27; 95.20: e0101021.
PMID: 34319784
Blockade of endoplasmic reticulum stress-induced cell death by Ureaplasma parvum vacuolating factor.
Cellular microbiology. 2021-09-07; e13392.
PMID: 34490709
Influenza A viruses balance ER stress with host protein synthesis shutoff.
Proceedings of the National Academy of Sciences of the United States of America. 2021-09-07; 118.36:
PMID: 34479996
Pathogenic Vibrio Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes.
mSystems. 2021-08-31; 6.4: e0057121.
PMID: 34227831
Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa.
Frontiers in genetics. 2021-08-30; 12.733674.
PMID: 34527025
Draft Genome Sequence of Desulfurobacterium sp. Strain AV08, a Thermophilic Chemolithoautotroph Isolated from a Deep-Sea Hydrothermal Vent.
Microbiology resource announcements. 2021-08-26; 10.34: e0061521.
PMID: 34435861
Complete Genomes of Clade G6 Saccharibacteria Suggest a Divergent Ecological Niche and Lifestyle.
mSphere. 2021-08-25; 6.4: e0053021.
PMID: 34378983
Relating sinking and suspended microbial communities in the California Current Ecosystem: digestion resistance and the contributions of phytoplankton taxa to export.
Environmental microbiology. 2021-08-25;
PMID: 34431195
Intestinal virome and therapeutic potential of bacteriophages in liver disease.
Journal of hepatology. 2021-08-23;
PMID: 34437908

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