Publications

Journal of dental research. 2022-10-01; 101.11: 1274-1288.
A Roadmap for the Human Oral and Craniofacial Cell Atlas
Caetano AJ, Human Cell Atlas Oral and Craniofacial Bionetwork, Sequeira I, Byrd KM
PMID: 36154725
PloS one. 2022-09-23; 17.9: e0275070.
Machine learning for cell type classification from single nucleus RNA sequencing data
Le H, Peng B, Uy J, Carrillo D, Zhang Y, Aevermann BD, Scheuermann RH
PMID: 36149937
The journal of physical chemistry. B. 2022-09-15; 126.36: 6820-6834.
Toward the Complete Functional Characterization of a Minimal Bacterial Proteome
Bianchi DM, Pelletier JF, Hutchison CA, Glass JI, Luthey-Schulten Z
PMID: 36048731
Viruses. 2022-09-13; 14.9:
Co-Deletion of A238L and EP402R Genes from a Genotype IX African Swine Fever Virus Results in Partial Attenuation and Protection in Swine
Abkallo HM, Hemmink JD, Oduor B, Khazalwa EM, Svitek N, Assad-Garcia N, Khayumbi J, Fuchs W, Vashee S, Steinaa L
PMID: 36146830
Proceedings of the National Academy of Sciences of the United States of America. 2022-09-13; 119.37: e2200014119.
Microbial functional diversity across biogeochemical provinces in the central Pacific Ocean
Saunders JK, McIlvin MR, Dupont CL, Kaul D, Moran DM, Horner T, Laperriere SM, Webb EA, Bosak T, Santoro AE, Saito MA
PMID: 36067300
Proceedings of the National Academy of Sciences of the United States of America. 2022-09-13; 119.37: e2204717119.
SARS-CoV-2 variant spike and accessory gene mutations alter pathogenesis
McGrath ME, Xue Y, Dillen C, Oldfield L, Assad-Garcia N, Zaveri J, Singh N, Baracco L, Taylor LJ, Vashee S, Frieman MB
PMID: 36040867
mBio. 2022-08-30; 13.4: e0163022.
Metabolite Damage and Damage Control in a Minimal Genome
Haas D, Thamm AM, Sun J, Huang L, Sun L, Beaudoin GAW, Wise KS, Lerma-Ortiz C, Bruner SD, Breuer M, Luthey-Schulten Z, Lin J, Wilson MA, Brown G, Yakunin AF, Kurilyak I, Folz J, Fiehn O, Glass JI, Hanson AD, Henry CS, de Crécy-Lagard V
PMID: 35862786
Journal of fungi (Basel, Switzerland). 2022-08-16; 8.8:
Coccidioides Species: A Review of Basic Research: 2022
Kirkland TN, Stevens DA, Hung CY, Beyhan S, Taylor JW, Shubitz LF, Duttke SH, Heidari A, Johnson RH, Deresinski SC, Lauer A, Fierer J
PMID: 36012847
Journal of virology. 2022-08-10; 96.15: e0083322.
Animal Models of Enterovirus D68 Infection and Disease
Vermillion MS, Dearing J, Zhang Y, Adney DR, Scheuermann RH, Pekosz A, Tarbet EB
PMID: 35852353
Hepatology communications. 2022-08-01; 6.8: 2058-2069.
Intestinal virome in patients with alcohol use disorder and after abstinence
Hsu CL, Zhang X, Jiang L, Lang S, Hartmann P, Pride D, Fouts DE, Stärkel P, Schnabl B
PMID: 35368152

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