Bioinformatics Training April 4 - May 8, 2017

Bioinformatics Training April 4 - May 8, 2017

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Visiting scientist Dr. Naser A Feto from Vaal University of Technology, South Africa attended bioinformatics training at JCVI. JCVI instructors included  Mr. Indresh Singh, Ms. Lauren Brinkac, Mr . Toby Clarke, Dr. Rembert Pieper. The visiting scientists were led through training and hands-on informatics exercises of following topics. 

Training topics

Python/Biopython

Unix/Linux

Sequencing and data QC

Data submission (SRA, GenBank)

Informatics for Assembly, SNP, RNA-sequence analysis

Introduction to R-Programming

Comparative and Phylogenetic analysis (Pangenome, NASP, LOCUST, etc)

Tools for Pathway and Network Analysis of ‘OMICS Data

Molecular docking & protein 3-d visualization tools

Informatics for Proteomics

Bioinformatics for cancer genomics

Genome Wide Association Studies (GWAS) & SNPs

Analyses of demo data involving different tools

CLC Genomics Workbench