Publications

G3 (Bethesda, Md.). 2011-11-01; 1.6: 515-22.
Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila
Fass JN, Joshi NA, Couvillion MT, Bowen J, Gorovsky MA, Hamilton EP, Orias E, Hong K, Coyne RS, Eisen JA, Chalker DL, Lin D, Collins K
PMID: 22384362
Molecular microbiology. 2011-11-01; 82.3: 567-77.
Activation of a prophage-encoded tyrosine kinase by a heterologous infecting phage results in a self-inflicted abortive infection
Friedman DI, Mozola CC, Beeri K, Ko CC, Reynolds JL
PMID: 21985444
The Journal of infectious diseases. 2011-11-01; 204 Suppl 3.S904-10.
The Ebola virus VP24 protein prevents hnRNP C1/C2 binding to karyopherin α1 and partially alters its nuclear import
Shabman RS, Gulcicek EE, Stone KL, Basler CF
PMID: 21987768
The ISME journal. 2011-11-01; 5.11: 1784-95.
Archaea in Yellowstone Lake
Kan J, Clingenpeel S, Macur RE, Inskeep WP, Lovalvo D, Varley J, Gorby Y, McDermott TR, Nealson K
PMID: 21544103
The American journal of tropical medicine and hygiene. 2011-11-01; 85.5: 961-3.
Dual infection of novel influenza viruses A/H1N1 and A/H3N2 in a cluster of Cambodian patients
Myers CA, Kasper MR, Yasuda CY, Savuth C, Spiro DJ, Halpin R, Faix DJ, Coon R, Putnam SD, Wierzba TF, Blair PJ
PMID: 22049058
Genetics. 2011-11-01; 189.3: 951-66.
Pervasive recombination and sympatric genome diversification driven by frequency-dependent selection in Borrelia burgdorferi, the Lyme disease bacterium
Haven J, Vargas LC, Mongodin EF, Xue V, Hernandez Y, Pagan P, Fraser-Liggett CM, Schutzer SE, Luft BJ, Casjens SR, Qiu WG
PMID: 21890743
PLoS pathogens. 2011-10-20; 7.10: e1002330.
HacA-independent functions of the ER stress sensor IreA synergize with the canonical UPR to influence virulence traits in Aspergillus fumigatus
Feng X, Krishnan K, Richie DL, Aimanianda V, Hartl L, Grahl N, Powers-Fletcher MV, Zhang M, Fuller KK, Nierman WC, Lu LJ, Latgé JP, Woollett L, Newman SL, Cramer RA, Rhodes JC, Askew DS
PMID: 22028661
Genome biology. 2011-10-17; 12.10: R100.
Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control
Coyne RS, Hannick L, Shanmugam D, Hostetler JB, Brami D, Joardar VS, Johnson J, Radune D, Singh I, Badger JH, Kumar U, Saier M, Wang Y, Cai H, Gu J, Mather MW, Vaidya AB, Wilkes DE, Rajagopalan V, Asai DJ, Pearson CG, Findly RC, Dickerson HW, Wu M, Martens C, Van de Peer Y, Roos DS, Cassidy-Hanley DM, Clark TG
PMID: 22004680
Current opinion in virology. 2011-10-01; 1.4: 280-1.
It's a small world after all-viral genomics and the global dominance of viruses
Ghedin E, Upton C
PMID: 22440784
Journal of bacteriology. 2011-10-01; 193.19: 5450-64.
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp
Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, Patil PB, Van Sluys MA, Ryan RP, Meyer DF, Han SW, Aparna G, Rajaram M, Delcher AL, Phillippy AM, Puiu D, Schatz MC, Shumway M, Sommer DD, Trapnell C, Benahmed F, Dimitrov G, Madupu R, Radune D, Sullivan S, Jha G, Ishihara H, Lee SW, Pandey A, Sharma V, Sriariyanun M, Szurek B, Vera-Cruz CM, Dorman KS, Ronald PC, Verdier V, Dow JM, Sonti RV, Tsuge S, Brendel VP, Rabinowicz PD, Leach JE, White FF, Salzberg SL
PMID: 21784931