Publications

Omics : a journal of integrative biology. 2008-06-01; 12.2: 101-8.
Meeting report: the fourth Genomic Standards Consortium (GSC) workshop
Field D, Glöckner FO, Garrity GM, Gray T, Sterk P, Cochrane G, Vaughan R, Kolker E, Kottmann R, Kyrpides N, Angiuoli S, Dawyndt P, Guralnick R, Goldstein P, Hall N, Hirschman L, Kravitz S, Lister AL, Markowitz V, Thomson N, Whetzel T
PMID: 18564914
Gene. 2008-05-31; 415.1-2: 13-22.
A novel SINE family occurs frequently in both genomic DNA and transcribed sequences in ixodid ticks of the arthropod sub-phylum Chelicerata
Sunter JD, Patel SP, Skilton RA, Githaka N, Knowles DP, Scoles GA, Nene V, de Villiers E, Bishop RP
PMID: 18394826
PLoS pathogens. 2008-05-30; 4.5: e1000076.
The evolutionary genetics and emergence of avian influenza viruses in wild birds
Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, Nolting J, Swayne DE, Runstadler JA, Happ GM, Senne DA, Wang R, Slemons RD, Holmes EC, Taubenberger JK
PMID: 18516303
Nature. 2008-05-29; 453.7195: 615-9.
The genomic and epidemiological dynamics of human influenza A virus
Rambaut A, Pybus OG, Nelson MI, Viboud C, Taubenberger JK, Holmes EC
PMID: 18418375
PloS one. 2008-05-28; 3.5: e2292.
The binary protein interactome of Treponema pallidum--the syphilis spirochete
Titz B, Rajagopala SV, Goll J, Häuser R, McKevitt MT, Palzkill T, Uetz P
PMID: 18509523
Infection and immunity. 2008-05-01; 76.5: 1889-96.
Population diversity and dynamics of Streptococcus mitis, Streptococcus oralis, and Streptococcus infantis in the upper respiratory tracts of adults, determined by a nonculture strategy
Bek-Thomsen M, Tettelin H, Hance I, Nelson KE, Kilian M
PMID: 18316382
BMC genomics. 2008-05-01; 9.204.
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A
Salzberg SL, Sommer DD, Schatz MC, Phillippy AM, Rabinowicz PD, Tsuge S, Furutani A, Ochiai H, Delcher AL, Kelley D, Madupu R, Puiu D, Radune D, Shumway M, Trapnell C, Aparna G, Jha G, Pandey A, Patil PB, Ishihara H, Meyer DF, Szurek B, Verdier V, Koebnik R, Dow JM, Ryan RP, Hirata H, Tsuyumu S, Won Lee S, Seo YS, Sriariyanum M, Ronald PC, Sonti RV, Van Sluys MA, Leach JE, White FF, Bogdanove AJ
PMID: 18452608
Journal of magnetic resonance (San Diego, Calif. : 1997). 2008-05-01; 192.1: 159-66.
NMR bioreactor development for live in-situ microbial functional analysis
Majors PD, McLean JS, Scholten JC
PMID: 18314365
Nature biotechnology. 2008-05-01; 26.5: 541-7.
The minimum information about a genome sequence (MIGS) specification
Field D, Garrity G, Gray T, Morrison N, Selengut J, Sterk P, Tatusova T, Thomson N, Allen MJ, Angiuoli SV, Ashburner M, Axelrod N, Baldauf S, Ballard S, Boore J, Cochrane G, Cole J, Dawyndt P, De Vos P, DePamphilis C, Edwards R, Faruque N, Feldman R, Gilbert J, Gilna P, Glöckner FO, Goldstein P, Guralnick R, Haft D, Hancock D, Hermjakob H, Hertz-Fowler C, Hugenholtz P, Joint I, Kagan L, Kane M, Kennedy J, Kowalchuk G, Kottmann R, Kolker E, Kravitz S, Kyrpides N, Leebens-Mack J, Lewis SE, Li K, Lister AL, Lord P, Maltsev N, Markowitz V, Martiny J, Methe B, Mizrachi I, Moxon R, Nelson K, Parkhill J, Proctor L, White O, Sansone SA, Spiers A, Stevens R, Swift P, Taylor C, Tateno Y, Tett A, Turner S, Ussery D, Vaughan B, Ward N, Whetzel T, San Gil I, Wilson G, Wipat A
PMID: 18464787
Applied and environmental microbiology. 2008-05-01; 74.9: 2646-58.
Genomic insights into Mn(II) oxidation by the marine alphaproteobacterium Aurantimonas sp. strain SI85-9A1
Dick GJ, Podell S, Johnson HA, Rivera-Espinoza Y, Bernier-Latmani R, McCarthy JK, Torpey JW, Clement BG, Gaasterland T, Tebo BM
PMID: 18344346