Publications

FEMS microbiology letters. 2006-02-01; 255.2: 275-9.
The aflatoxin pathway regulator AflR induces gene transcription inside and outside of the aflatoxin biosynthetic cluster
Price MS, Yu J, Nierman WC, Kim HS, Pritchard B, Jacobus CA, Bhatnagar D, Cleveland TE, Payne GA
PMID: 16448506
Molecular biology and evolution. 2006-02-01; 23.2: 411-20.
The Trypanosoma cruzi L1Tc and NARTc non-LTR retrotransposons show relative site specificity for insertion
Bringaud F, Bartholomeu DC, Blandin G, Delcher A, Baltz T, El-Sayed NM, Ghedin E
PMID: 16267142
Molecular and biochemical parasitology. 2006-02-01; 145.2: 184-94.
The VIPER elements of trypanosomes constitute a novel group of tyrosine recombinase-enconding retrotransposons
Lorenzi HA, Robledo G, Levin MJ
PMID: 16297462
Proceedings of the National Academy of Sciences of the United States of America. 2006-01-31; 103.5: 1528-33.
Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system
Pukatzki S, Ma AT, Sturtevant D, Krastins B, Sarracino D, Nelson WC, Heidelberg JF, Mekalanos JJ
PMID: 16432199
BMC bioinformatics. 2006-01-19; 7.31.
Similarity-based gene detection: using COGs to find evolutionarily-conserved ORFs
Powell BC, Hutchison CA
PMID: 16423288
Proceedings of the National Academy of Sciences of the United States of America. 2006-01-17; 103.3: 732-7.
Molecular analysis of the bacterial microbiota in the human stomach
Bik EM, Eckburg PB, Gill SR, Nelson KE, Purdom EA, Francois F, Perez-Perez G, Blaser MJ, Relman DA
PMID: 16407106
Gene. 2006-01-17; 366.1: 104-8.
Using the transcriptome to annotate the genome revisited: application of massively parallel signature sequencing (MPSS)
Shah T, de Villiers E, Nene V, Hass B, Taracha E, Gardner MJ, Sansom C, Pelle R, Bishop R
PMID: 16303258
Science (New York, N.Y.). 2006-01-13; 311.5758: 239-42.
Herpesviral protein networks and their interaction with the human proteome
Uetz P, Dong YA, Zeretzke C, Atzler C, Baiker A, Berger B, Rajagopala SV, Roupelieva M, Rose D, Fossum E, Haas J
PMID: 16339411
Proceedings of the National Academy of Sciences of the United States of America. 2006-01-10; 103.2: 425-30.
Essential genes of a minimal bacterium
Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA, Smith HO, Venter JC
PMID: 16407165
Nucleic acids research. 2006-01-01; 34.3: 1050-65.
Computational inference and experimental validation of the nitrogen assimilation regulatory network in cyanobacterium Synechococcus sp. WH 8102
Su Z, Mao F, Dam P, Wu H, Olman V, Paulsen IT, Palenik B, Xu Y
PMID: 16473855