Publications

Journal of computational biology : a journal of computational molecular cell biology. 2005-06-01; 12.5: 497-513.

A tool for analyzing mate pairs in assemblies (TAMPA)

Dew IM, Walenz B, Sutton G

PMID: 15952874

European journal of immunology. 2005-06-01; 35.6: 1859-68.

Immune responses to Plasmodium vivax pre-erythrocytic stage antigens in naturally exposed Duffy-negative humans: a potential model for identification of liver-stage antigens

Wang R, Arevalo-Herrera M, Gardner MJ, Bonelo A, Carlton JM, Gomez A, Vera O, Soto L, Vergara J, Bidwell SL, Domingo A, Fraser CM, Herrera S

PMID: 15864779

Journal of clinical oncology : official journal of the American Society of Clinical Oncology. 2005-05-20; 23.15: 3526-35.

Molecular staging for survival prediction of colorectal cancer patients

Eschrich S, Yang I, Bloom G, Kwong KY, Boulware D, Cantor A, Coppola D, Kruhøffer M, Aaltonen L, Orntoft TF, Quackenbush J, Yeatman TJ

PMID: 15908663

Proceedings of the National Academy of Sciences of the United States of America. 2005-05-17; 102.20: 7315-20.

Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella

Schmidt EW, Nelson JT, Rasko DA, Sudek S, Eisen JA, Haygood MG, Ravel J

PMID: 15883371

Bioinformatics (Oxford, England). 2005-05-01; 21.9: 1782-8.

Efficient implementation of a generalized pair hidden Markov model for comparative gene finding

Majoros WH, Pertea M, Salzberg SL

PMID: 15691859

Journal of bacteriology. 2005-05-01; 187.10: 3339-51.

Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans

Schmid AK, Howell HA, Battista JR, Peterson SN, Lidstrom ME

PMID: 15866918

Nature methods. 2005-05-01; 2.5: 337-44.

Independence and reproducibility across microarray platforms

Larkin JE, Frank BC, Gavras H, Sultana R, Quackenbush J

PMID: 15846360

Plant physiology. 2005-05-01; 138.1: 38-46.

Databases and information integration for the Medicago truncatula genome and transcriptome

Cannon SB, Crow JA, Heuer ML, Wang X, Cannon EK, Dwan C, Lamblin AF, Vasdewani J, Mudge J, Cook A, Gish J, Cheung F, Kenton S, Kunau TM, Brown D, May GD, Kim D, Cook DR, Roe BA, Town CD, Young ND, Retzel EF

PMID: 15888676

Molecular microbiology. 2005-05-01; 56.3: 625-37.

Promoter architecture and response to a positive regulator of archaeal transcription

Ouhammouch M, Langham GE, Hausner W, Simpson AJ, El-Sayed NM, Geiduschek EP

PMID: 15819620

Medical mycology. 2005-05-01; 43 Suppl 1.S313-9.

The ergosterol biosynthesis pathway, transporter genes, and azole resistance in Aspergillus fumigatus

Ferreira ME, Colombo AL, Paulsen I, Ren Q, Wortman J, Huang J, Goldman MH, Goldman GH

PMID: 16110826