Publications

Genome biology. 2007-01-01; 8.3: R264.
Evolution of allostery in the cyclic nucleotide binding module
Kannan N, Wu J, Anand GS, Yooseph S, Neuwald AF, Venter JC, Taylor SS
PMID: 18076763
Genome biology. 2007-01-01; 8.3: R152.
Using comparative genomics to reorder the human genome sequence into a virtual sheep genome
Dalrymple BP, Kirkness EF, Nefedov M, McWilliam S, Ratnakumar A, Barris W, Zhao S, Shetty J, Maddox JF, O'Grady M, Nicholas F, Crawford AM, Smith T, de Jong PJ, McEwan J, Oddy VH, Cockett NE, International Sheep Genomics Consortium
PMID: 17663790
Nucleic acids research. 2007-01-01; 35.Database issue: D224-8.
New developments in the InterPro database
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R, Courcelle E, Das U, Daugherty L, Dibley M, Finn R, Fleischmann W, Gough J, Haft D, Hulo N, Hunter S, Kahn D, Kanapin A, Kejariwal A, Labarga A, Langendijk-Genevaux PS, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Nikolskaya AN, Orchard S, Orengo C, Petryszak R, Selengut JD, Sigrist CJ, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C
PMID: 17202162
Journal of bacteriology. 2007-01-01; 189.1: 388-402.
Regulation of rugosity and biofilm formation in Vibrio cholerae: comparison of VpsT and VpsR regulons and epistasis analysis of vpsT, vpsR, and hapR
Beyhan S, Bilecen K, Salama SR, Casper-Lindley C, Yildiz FH
PMID: 17071756
Methods in molecular biology (Clifton, N.J.). 2007-01-01; 408.113-36.
Plant database resources at The Institute for Genomic Research
Chan AP, Rabinowicz PD, Quackenbush J, Buell CR, Town CD
PMID: 18287690
Breast cancer research : BCR. 2007-01-01; 9.1: R5.
Somatic sequence alterations in twenty-one genes selected by expression profile analysis of breast carcinomas
Chanock SJ, Burdett L, Yeager M, Llaca V, Langerød A, Presswalla S, Kaaresen R, Strausberg RL, Gerhard DS, Kristensen V, Perou CM, Børresen-Dale AL
PMID: 17224074
Nucleic acids research. 2007-01-01; 35.Database issue: D846-51.
The TIGR Plant Transcript Assemblies database
Childs KL, Hamilton JP, Zhu W, Ly E, Cheung F, Wu H, Rabinowicz PD, Town CD, Buell CR, Chan AP
PMID: 17088284
Nucleic acids research. 2007-01-01; 35.Database issue: D883-7.
The TIGR Rice Genome Annotation Resource: improvements and new features
Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR
PMID: 17145706
Nucleic acids research. 2007-01-01; 35.Database issue: e148.
A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip whole-genome resequencing platform
Pandya GA, Holmes MH, Sunkara S, Sparks A, Bai Y, Verratti K, Saeed K, Venepally P, Jarrahi B, Fleischmann RD, Peterson SN
PMID: 18006572
BMC genomics. 2006-12-28; 7.327.
Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis
Campbell MA, Haas BJ, Hamilton JP, Mount SM, Buell CR
PMID: 17194304