Publications

Nature reviews. Microbiology. 2024-02-01; 22.2: 89-104.
The oral microbiome: diversity, biogeography and human health
Baker JL, Mark Welch JL, Kauffman KM, McLean JS, He X
PMID: 37700024
Gut microbes. 2024-02-01; 16.1: 2307586.
Fungal signature differentiates alcohol-associated liver disease from nonalcoholic fatty liver disease
Viebahn G, Hartmann P, Lang S, Demir M, Zhang X, Fouts DE, Stärkel P, Schnabl B
PMID: 38298161
iScience. 2024-01-19; 27.1: 108477.
From TgO/GABA-AT, GABA, and T-263 Mutant to Conception of Toxoplasma
Lykins J, Moschitto MJ, Zhou Y, Filippova EV, Le HV, Tomita T, Fox BA, Bzik DJ, Su C, Rajagopala SV, Flores K, Spano F, Woods S, Roberts CW, Hua C, El Bissati K, Wheeler KM, Dovgin S, Muench SP, McPhillie M, Fishwick CWG, Anderson WF, Lee PJ, Hickman M, Weiss LM, Dubey JP, Lorenzi HA, Silverman RB, McLeod RL
PMID: 38205261
PloS one. 2024-01-18; 19.1: e0285093.
Coordinating virus research: The Virus Infectious Disease Ontology
Beverley J, Babcock S, Carvalho G, Cowell LG, Duesing S, He Y, Hurley R, Merrell E, Scheuermann RH, Smith B
PMID: 38236918
The ISME journal. 2024-01-08; 18.1:
Iron limitation of heterotrophic bacteria in the California Current System tracks relative availability of organic carbon and iron
Manck LE, Coale TH, Stephens BM, Forsch KO, Aluwihare LI, Dupont CL, Allen AE, Barbeau KA
PMID: 38624181
The ISME journal. 2023-12-01; 17.12: 2147-2159.
Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics
Thukral M, Allen AE, Petras D
PMID: 37857709
Nature genetics. 2023-12-01; 55.12: 2189-2199.
Circular extrachromosomal DNA promotes tumor heterogeneity in high-risk medulloblastoma
Chapman OS, Luebeck J, Sridhar S, Wong IT, Dixit D, Wang S, Prasad G, Rajkumar U, Pagadala MS, Larson JD, He BJ, Hung KL, Lange JT, Dehkordi SR, Chandran S, Adam M, Morgan L, Wani S, Tiwari A, Guccione C, Lin Y, Dutta A, Lo YY, Juarez E, Robinson JT, Korshunov A, Michaels JA, Cho YJ, Malicki DM, Coufal NG, Levy ML, Hobbs C, Scheuermann RH, Crawford JR, Pomeroy SL, Rich JN, Zhang X, Chang HY, Dixon JR, Bagchi A, Deshpande AJ, Carter H, Fraenkel E, Mischel PS, Wechsler-Reya RJ, Bafna V, Mesirov JP, Chavez L
PMID: 37945900
The ISME journal. 2023-12-01; 17.12: 2459.
Publisher Correction: Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics
Thukral M, Allen AE, Petras D
PMID: 37993599
Environmental microbiology. 2023-12-01; 25.12: 2761-2775.
Plastics select for distinct early colonizing microbial populations with reproducible traits across environmental gradients
Bos RP, Kaul D, Zettler ER, Hoffman JM, Dupont CL, Amaral-Zettler LA, Mincer TJ
PMID: 37132662
Frontiers in cellular neuroscience. 2023-11-29; 17.1256619.
Cochlear transcriptome analysis of an outbred mouse population (CFW)
Boussaty EC, Tedeschi N, Novotny M, Ninoyu Y, Du E, Draf C, Zhang Y, Manor U, Scheuermann RH, Friedman R
PMID: 38094513

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