Publications

Database : the journal of biological databases and curation. 2012-01-01; 2012.bas003.
AntiFam: a tool to help identify spurious ORFs in protein annotation
Eberhardt RY, Haft DH, Punta M, Martin M, O'Donovan C, Bateman A
PMID: 22434837
PloS one. 2012-01-01; 7.5: e34064.
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity
Ziemert N, Podell S, Penn K, Badger JH, Allen E, Jensen PR
PMID: 22479523
Frontiers in plant science. 2012-01-01; 3.172.
Unleashing the genome of brassica rapa
Tang H, Lyons E
PMID: 22866056
PloS one. 2012-01-01; 7.3: e33903.
Comparative omics-driven genome annotation refinement: application across Yersiniae
Schrimpe-Rutledge AC, Jones MB, Chauhan S, Purvine SO, Sanford JA, Monroe ME, Brewer HM, Payne SH, Ansong C, Frank BC, Smith RD, Peterson SN, Motin VL, Adkins JN
PMID: 22479471
Frontiers in microbiology. 2012-01-01; 3.375.
Influence of vitamin B auxotrophy on nitrogen metabolism in eukaryotic phytoplankton
Bertrand EM, Allen AE
PMID: 23091473
Proceedings of the National Academy of Sciences of the United States of America. 2011-12-20; 108.51: E1417-22.
Fitness costs limit influenza A virus hemagglutinin glycosylation as an immune evasion strategy
Das SR, Hensley SE, David A, Schmidt L, Gibbs JS, Puigbò P, Ince WL, Bennink JR, Yewdell JW
PMID: 22106257
The Plant cell. 2011-12-01; 23.12: 4241-53.
Different gene families in Arabidopsis thaliana transposed in different epochs and at different frequencies throughout the rosids
Woodhouse MR, Tang H, Freeling M
PMID: 22180627
Molecular microbiology. 2011-12-01; 82.6: 1545-62.
Competition among Hfq-binding small RNAs in Escherichia coli
Moon K, Gottesman S
PMID: 22040174
Molecular and biochemical parasitology. 2011-12-01; 180.2: 106-11.
Analysis of transcriptional regulation of tetracycline responsive genes in Brugia malayi
Liu C, Kelen PV, Ghedin E, Lustigman S, Unnasch TR
PMID: 21944995
PLoS neglected tropical diseases. 2011-12-01; 5.12: e1409.
A deep sequencing approach to comparatively analyze the transcriptome of lifecycle stages of the filarial worm, Brugia malayi
Choi YJ, Ghedin E, Berriman M, McQuillan J, Holroyd N, Mayhew GF, Christensen BM, Michalski ML
PMID: 22180794

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