GCID Publications

PloS one. 2012-05-22; 7.5: e37585.
Twelve positions in a β-lactamase that can expand its substrate spectrum with a single amino acid substitution
Yi H, Cho KH, Cho YS, Kim K, Nierman WC, Kim HS
PMID: 22629423
Metabolic engineering. 2012-05-01; 14.3: 196-204.
Methods and applications for assembling large DNA constructs
Merryman C, Gibson DG
PMID: 22629570
Proteome science. 2012-04-30; 10.1: 30.
Development stage-specific proteomic profiling uncovers small, lineage specific proteins most abundant in the Aspergillus Fumigatus conidial proteome
Suh MJ, Fedorova ND, Cagas SE, Hastings S, Fleischmann RD, Peterson SN, Perlin DS, Nierman WC, Pieper R, Momany M
PMID: 22545825
Journal of bacteriology. 2012-04-01; 194.8: 1885-96.
Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage
Kyle JL, Cummings CA, Parker CT, Quiñones B, Vatta P, Newton E, Huynh S, Swimley M, Degoricija L, Barker M, Fontanoz S, Nguyen K, Patel R, Fang R, Tebbs R, Petrauskene O, Furtado M, Mandrell RE
PMID: 22328665
BMC bioinformatics. 2012-03-19; 13.42.
Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community
Krampis K, Booth T, Chapman B, Tiwari B, Bicak M, Field D, Nelson KE
PMID: 22429538
Journal of bacteriology. 2012-01-01; 194.2: 545-6.
Whole-genome sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii
Schutzer SE, Fraser-Liggett CM, Qiu WG, Kraiczy P, Mongodin EF, Dunn JJ, Luft BJ, Casjens SR
PMID: 22207749
PloS one. 2012-01-01; 7.6: e29044.
A case study for large-scale human microbiome analysis using JCVI's metagenomics reports (METAREP)
Goll J, Thiagarajan M, Abubucker S, Huttenhower C, Yooseph S, Methé BA
PMID: 22719821
PloS one. 2012-01-01; 7.3: e31839.
Multifunctional adaptive NS1 mutations are selected upon human influenza virus evolution in the mouse
Forbes NE, Ping J, Dankar SK, Jia JJ, Selman M, Keleta L, Zhou Y, Brown EG
PMID: 22363747
PloS one. 2012-01-01; 7.3: e32911.
Novel plasmids and resistance phenotypes in Yersinia pestis: unique plasmid inventory of strain Java 9 mediates high levels of arsenic resistance
Eppinger M, Radnedge L, Andersen G, Vietri N, Severson G, Mou S, Ravel J, Worsham PL
PMID: 22479347
Methods in molecular biology (Clifton, N.J.). 2012-01-01; 944.23-45.
Bioinformatics approaches and software for detection of secondary metabolic gene clusters
Fedorova ND, Moktali V, Medema MH
PMID: 23065606

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