GCID Publications

Genetics. 2011-11-01; 189.3: 951-66.
Pervasive recombination and sympatric genome diversification driven by frequency-dependent selection in Borrelia burgdorferi, the Lyme disease bacterium
Haven J, Vargas LC, Mongodin EF, Xue V, Hernandez Y, Pagan P, Fraser-Liggett CM, Schutzer SE, Luft BJ, Casjens SR, Qiu WG
PMID: 21890743
PLoS pathogens. 2011-10-01; 7.10: e1002330.
HacA-independent functions of the ER stress sensor IreA synergize with the canonical UPR to influence virulence traits in Aspergillus fumigatus
Feng X, Krishnan K, Richie DL, Aimanianda V, Hartl L, Grahl N, Powers-Fletcher MV, Zhang M, Fuller KK, Nierman WC, Lu LJ, Latgé JP, Woollett L, Newman SL, Cramer RA, Rhodes JC, Askew DS
PMID: 22028661
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 2011-10-01; 11.7: 1586-94.
Intra-genotypic diversity of archival G4P[8] human rotaviruses from Washington, DC
McDonald SM, Davis K, McAllen JK, Spiro DJ, Patton JT
PMID: 21712102
PLoS neglected tropical diseases. 2011-09-01; 5.9: e1319.
Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar
Vogler AJ, Chan F, Wagner DM, Roumagnac P, Lee J, Nera R, Eppinger M, Ravel J, Rahalison L, Rasoamanana BW, Beckstrom-Sternberg SM, Achtman M, Chanteau S, Keim P
PMID: 21931876
Journal of clinical microbiology. 2011-08-01; 49.8: 2818-26.
Extensive horizontal gene transfer in ureaplasmas from humans questions the utility of serotyping for diagnostic purposes
Xiao L, Paralanov V, Glass JI, Duffy LB, Robertson JA, Cassell GH, Chen Y, Waites KB
PMID: 21697330
Vaccine. 2011-07-22; 29 Suppl 2.B56-62.
Surveillance of illness associated with pandemic (H1N1) 2009 virus infection among adults using a global clinical site network approach: the INSIGHT FLU 002 and FLU 003 studies
Dwyer DE, Davey RT, INSIGHT Influenza Study Group, Losso MH, Lynfield R, Cozzi-Lepri A, Gey D, Herman-Lamin K, Hoppe A, Lane HC, Lundgren JD, Neaton JD, Pett SL, Standridge B, Uyeki TM, Wentworth D, Munroe D, Rappoport C, Schwarze S, Aagaard B, Adzic D, Grarup J, Herrero P, Jansson P, Kjær J, Jakobsen ML, Jensen B, Jensen KB, Juncher H, Lopez P, Mocroft A, Pearson M, Portas B, Sabin C, Tillmann K, Babiker A, Braimah N, Collaco-Moraes Y, Hudson F, Kummeling I, Pacciarini F, Paton N, DuChene A, George M, Harrison M, Krum E, Larson G, Nelson R, Quan K, Quan SF, Reilly C, Schultz T, Thompson G, Wyman N, Avihingsanon A, Cassar L, Charoentonpuban K, Emery S, Laohajinda K, Jupimai T, Lanusse I, Moricz A, Otegui I, Ruxrungtham K, Robson R, Finley E, Gordin F, Sanchez A, Vjecha M, Baxter J, Brown S, Ghedin E, Halpin R, Hoover M, Baseler B, Metcalf JA, Cox N, Gubareva L, Hancock K, Katz J, Klimov A, Shaw M, Rubinson L, Barcan L, Alberto Corral J, Omar David D, Laplume HE, Beatriz Lasala M, Lopardo GD, Losso MH, Lupo S, Warley E, Bloch M, Moore R, Roth N, Soo TM, Vlahakis E, Burgmann H, Clumeck N, De Wit S, Florence E, Kabeya K, Weckx J, Perez C, Wolff MJ, Gerstoft J, Østergaard L, Zilmer K, Bogner JR, Brockmeyer NH, Faetkenheuer G, Klinker H, Plettenberg A, Rockstroh J, Stephan C, Antoniadou A, Koratzanis G, Koulouris N, Polixronopoulos V, Sambatakou H, Vasilopoulos N, Caplinskas S, La Rosa A, Mendo F, Salazar R, Valencia J, Bakowska E, Horban A, Knysz B, Antunes F, Doroana M, Padayatchi N, Dalmau D, Fernandez-Cruz E, Gatell JM, Sanz Sanz J, Soriano V, Chetchotisakd P, Suwanpimolkul G, Leen CL, Cohen C, Cohn DL, DeHovitz JA, El-Sadr W, Glesby M, Gordin FM, Hodder S, Markowitz N, Novak RM, Schooley R, Simon GL, Tedaldi EM, Temesgen Z, Timpone J, Uslan DZ, Heeter B, Elliott J, Konecny P, McBride J, Jorens P, Chiu T, Wu, Mathiesen L, Nielsen H, Ostergaard L, Stenvang S, Pedersen, Bergmann F, Maagaard A, Estrada V, Knobel H, Freud, Blazquez Garrido RM, Sanz Moreno J, Pano-Pardo JR, Angus BJ, Chadwick DR, Dockrell D, Newport M, Wilkins E, Anderson H, Baker JV, Freiberg MS, Gulick R, Gurka D, Paez A, Patil N, Reboli A, Sands M, Heeter Wade B
PMID: 21757105
Journal of virology. 2011-07-01; 85.14: 6923-9.
Extensive geographical mixing of 2009 human H1N1 influenza A virus in a single university community
Holmes EC, Ghedin E, Halpin RA, Stockwell TB, Zhang XQ, Fleming R, Davey R, Benson CA, Mehta S, Taplitz R, Liu YT, Brouwer KC, Wentworth DE, Lin X, Schooley RT, INSIGHT FLU002 Study Group
PMID: 21593168
Journal of bacteriology. 2011-07-01; 193.14: 3556-68.
Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution
Fricke WF, Mammel MK, McDermott PF, Tartera C, White DG, Leclerc JE, Ravel J, Cebula TA
PMID: 21602358
BMC genomics. 2011-06-06; 12.294.
Comparative genomic analysis of Vibrio parahaemolyticus: serotype conversion and virulence
Chen Y, Stine OC, Badger JH, Gil AI, Nair GB, Nishibuchi M, Fouts DE
PMID: 21645368
The Journal of general virology. 2011-06-01; 92.Pt 6: 1369-79.
Molecular characterization of a new species in the genus Alphacoronavirus associated with mink epizootic catarrhal gastroenteritis
Vlasova AN, Halpin R, Wang S, Ghedin E, Spiro DJ, Saif LJ
PMID: 21346029

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