Publications

Microbial ecology. 2016-01-01; 71.1: 233-42.
Minimally Invasive Sampling Method Identifies Differences in Taxonomic Richness of Nasal Microbiomes in Young Infants Associated with Mode of Delivery
Shilts MH, Rosas-Salazar C, Tovchigrechko A, Larkin EK, Torralba M, Akopov A, Halpin R, Peebles RS, Moore ML, Anderson LJ, Nelson KE, Hartert TV, Das SR
PMID: 26370110
Cytometry. Part A : the journal of the International Society for Analytical Cytology. 2016-01-01; 89.1: 16-21.
A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes
Aghaeepour N, Chattopadhyay P, Chikina M, Dhaene T, Van Gassen S, Kursa M, Lambrecht BN, Malek M, McLachlan GJ, Qian Y, Qiu P, Saeys Y, Stanton R, Tong D, Vens C, Walkowiak S, Wang K, Finak G, Gottardo R, Mosmann T, Nolan GP, Scheuermann RH, Brinkman RR
PMID: 26447924
Plasmid. 2016-01-01; 83.8-11.
Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids
Losada L, DebRoy C, Radune D, Kim M, Sanka R, Brinkac L, Kariyawasam S, Shelton D, Fratamico PM, Kapur V, Feng PC
PMID: 26746359
PloS one. 2016-01-01; 11.10: e0155757.
Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution
Díez B, Nylander JA, Ininbergs K, Dupont CL, Allen AE, Yooseph S, Rusch DB, Bergman B
PMID: 27196065
Frontiers in bioengineering and biotechnology. 2016-01-01; 4.65.
Refinement of the Diatom Episome Maintenance Sequence and Improvement of Conjugation-Based DNA Delivery Methods
Diner RE, Bielinski VA, Dupont CL, Allen AE, Weyman PD
PMID: 27551676
F1000Research. 2016-01-01; 5.132.
Normalizing sleep quality disturbed by psychiatric polypharmacy: a single patient open trial (SPOT)
Magnuson V, Wang Y, Schork N
PMID: 28781744
PloS one. 2016-01-01; 11.3: e0160929.
Patterns of Transcript Abundance of Eukaryotic Biogeochemically-Relevant Genes in the Amazon River Plume
Zielinski BL, Allen AE, Carpenter EJ, Coles VJ, Crump BC, Doherty M, Foster RA, Goes JI, Gomes HR, Hood RR, McCrow JP, Montoya JP, Moustafa A, Satinsky BM, Sharma S, Smith CB, Yager PL, Paul JH
PMID: 27598790
Frontiers in microbiology. 2016-01-01; 7.1230.
Staphylococcus aureus Shifts toward Commensalism in Response to Corynebacterium Species
Ramsey MM, Freire MO, Gabrilska RA, Rumbaugh KP, Lemon KP
PMID: 27582729
mSphere. 2016-01-01; 1.1:
Isolation and Characterization of a Novel Gammaherpesvirus from a Microbat Cell Line
Shabman RS, Shrivastava S, Tsibane T, Attie O, Jayaprakash A, Mire CE, Dilley KE, Puri V, Stockwell TB, Geisbert TW, Sachidanandam R, Basler CF
PMID: 27303702
PloS one. 2016-01-01; 11.10: e0166202.
High-Throughput Sequencing Reveals Circulating miRNAs as Potential Biomarkers of Kidney Damage in Patients with Systemic Lupus Erythematosus
Navarro-Quiroz E, Pacheco-Lugo L, Lorenzi H, Díaz-Olmos Y, Almendrales L, Rico E, Navarro R, España-Puccini P, Iglesias A, Egea E, Aroca G
PMID: 27835701