Publications

Journal of leukocyte biology. 2021-12-01; 110.6: 1225-1239.
Corticosteroid treatment in COVID-19 modulates host inflammatory responses and transcriptional signatures of immune dysregulation
Pinski AN, Steffen TL, Zulu MZ, George SL, Dickson A, Tifrea D, Maroney KJ, Tedeschi N, Zhang Y, Scheuermann RH, Pinto AK, Brien JD, Messaoudi I
PMID: 34730254
Journal of hepatology. 2021-12-01; 75.6: 1465-1475.
Intestinal virome and therapeutic potential of bacteriophages in liver disease
Hsu C, Hsu CL, Duan Y, Fouts DE, Schnabl B
PMID: 34437908
International journal of molecular sciences. 2021-11-07; 22.21:
Multi-Omics Study of Keystone Species in a Cystic Fibrosis Microbiome
Silveira CB, Cobián-Güemes AG, Uranga C, Baker JL, Edlund A, Rohwer F, Conrad D
PMID: 34769481
EBioMedicine. 2021-11-01; 73.103644.
Interactions between fecal gut microbiome, enteric pathogens, and energy regulating hormones among acutely malnourished rural Gambian children
Nabwera HM, Espinoza JL, Worwui A, Betts M, Okoi C, Sesay AK, Bancroft R, Agbla SC, Jarju S, Bradbury RS, Colley M, Jallow AT, Liu J, Houpt ER, Prentice AM, Antonio M, Bernstein RM, Dupont CL, Kwambana-Adams BA
PMID: 34695658
Microbial ecology. 2021-11-01; 82.4: 1074-1079.
Microbial Species that Initially Colonize the Human Gut at Birth or in Early Childhood Can Stay in Human Body for Lifetime
Li W, Nelson KE
PMID: 33410935
Microbial ecology. 2021-11-01; 82.4: 1030-1046.
Oral Microbial Species and Virulence Factors Associated with Oral Squamous Cell Carcinoma
Torralba MG, Aleti G, Li W, Moncera KJ, Lin YH, Yu Y, Masternak MM, Golusinski W, Golusinski P, Lamperska K, Edlund A, Freire M, Nelson KE
PMID: 33155101
Environmental microbiology. 2021-11-01; 23.11: 6734-6748.
Relating sinking and suspended microbial communities in the California Current Ecosystem: digestion resistance and the contributions of phytoplankton taxa to export
Valencia B, Stukel MR, Allen AE, McCrow JP, Rabines A, Palenik B, Landry MR
PMID: 34431195
Microbial ecology. 2021-11-01; 82.4: 1047.
Correction to: Oral Microbial Species and Virulence Factors Associated with Oral Squamous Cell Carcinoma
Torralba MG, Aleti G, Li W, Moncera KJ, Lin YH, Yu Y, Masternak MM, Golusinski W, Golusinski P, Lamperska K, Edlund A, Freire M, Nelson KE
PMID: 33219400
Frontiers in immunology. 2021-10-29; 12.690470.
Machine Learning-Based Single Cell and Integrative Analysis Reveals That Baseline mDC Predisposition Correlates With Hepatitis B Vaccine Antibody Response
Aevermann BD, Shannon CP, Novotny M, Ben-Othman R, Cai B, Zhang Y, Ye JC, Kobor MS, Gladish N, Lee AH, Blimkie TM, Hancock RE, Llibre A, Duffy D, Koff WC, Sadarangani M, Tebbutt SJ, Kollmann TR, Scheuermann RH
PMID: 34777332
Virus research. 2021-10-15; 304.198545.
Novel isoforms of influenza virus PA-X and PB1-F2 indicated by automatic annotation
Burnham AJ, Miller JR, Singh I, Billings EA, Rush MA, Air GM, Bour S
PMID: 34391827

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