Publications

Molecular biology and evolution. 2023-10-04; 40.10:

Genus-Wide Transcriptional Landscapes Reveal Correlated Gene Networks Underlying Microevolutionary Divergence in Diatoms

Walworth NG, Espinoza JL, Argyle PA, Hinners J, Levine NM, Doblin MA, Dupont CL, Collins S

PMID: 37874344

Bioinformatics (Oxford, England). 2023-10-03; 39.10:

A cell-level discriminative neural network model for diagnosis of blood cancers

Robles EE, Jin Y, Smyth P, Scheuermann RH, Bui JD, Wang HY, Oak J, Qian Y

PMID: 37756695

Cold Spring Harbor perspectives in biology. 2023-10-03;

Microbial Catalysis for CO₂ Sequestration: A Geobiological Approach

Van Den Berghe M, Walworth NG, Dalvie NC, Dupont CL, Springer M, Andrews MG, Romaniello SJ, Hutchins DA, Montserrat F, Silver PA, Nealson KH

PMID: 37788887

Nature immunology. 2023-10-01; 24.10: 1616-1627.

SARS-CoV-2 reservoir in post-acute sequelae of COVID-19 (PASC)

Proal AD, VanElzakker MB, Aleman S, Bach K, Boribong BP, Buggert M, Cherry S, Chertow DS, Davies HE, Dupont CL, Deeks SG, Eimer W, Ely EW, Fasano A, Freire M, Geng LN, Griffin DE, Henrich TJ, Iwasaki A, Izquierdo-Garcia D, Locci M, Mehandru S, Painter MM, Peluso MJ, Pretorius E, Price DA, Putrino D, Scheuermann RH, Tan GS, Tanzi RE, VanBrocklin HF, Yonker LM, Wherry EJ

PMID: 37667052

Nature immunology. 2023-10-01; 24.10: 1778.

Author Correction: SARS-CoV-2 reservoir in post-acute sequelae of COVID-19 (PASC)

Proal AD, VanElzakker MB, Aleman S, Bach K, Boribong BP, Buggert M, Cherry S, Chertow DS, Davies HE, Dupont CL, Deeks SG, Eimer W, Ely EW, Fasano A, Freire M, Geng LN, Griffin DE, Henrich TJ, Iwasaki A, Izquierdo-Garcia D, Locci M, Mehandru S, Painter MM, Peluso MJ, Pretorius E, Price DA, Putrino D, Scheuermann RH, Tan GS, Tanzi RE, VanBrocklin HF, Yonker LM, Wherry EJ

PMID: 37723351

Nature microbiology. 2023-10-01; 8.10: 1777-1786.

Microbiome ownership for Indigenous peoples

Handsley-Davis M, Anderson MZ, Bader AC, Ehau-Taumaunu H, Fox K, Kowal E, Weyrich LS

PMID: 37770744

Frontiers in microbiology. 2023-09-27; 14.1293129.

Corrigendum: Evidence for the cytoplasmic localization of the L-α-Glycerophosphate oxidase in members of the "Mycoplasma mycoides cluster"

Schumacher M, Nicholson P, Stoffel MH, Chandran S, D'Mello A, Ma L, Vashee S, Jores J, Labroussaa F

PMID: 37829444

Nature communications. 2023-09-22; 14.1: 5918.

Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures

Badrane H, Cheng S, Dupont CL, Hao B, Driscoll E, Morder K, Liu G, Newbrough A, Fleres G, Kaul D, Espinoza JL, Clancy CJ, Nguyen MH

PMID: 37739935

ISME communications. 2023-09-22; 3.1: 99.

Species-specific responses of marine bacteria to environmental perturbation

Peña-Montenegro TD, Kleindienst S, Allen AE, Eren AM, McCrow JP, Sánchez-Calderón JD, Arnold J, Joye SB

PMID: 37736763

Gut pathogens. 2023-09-20; 15.1: 44.

Whole-genome characterization of common rotavirus strains circulating in Vellore, India from 2002 to 2017: emergence of non-classical genomic constellations

Khakha SA, Varghese T, Giri S, Durbin A, Tan GS, Kalaivanan M, Prasad JH, Kang G

PMID: 37730725