Publications

Archives of virology. 2011-01-01; 156.1: 25-35.

Clostridium perfringens bacteriophages ΦCP39O and ΦCP26F: genomic organization and proteomic analysis of the virions

Seal BS, Fouts DE, Simmons M, Garrish JK, Kuntz RL, Woolsey R, Schegg KM, Kropinski AM, Ackermann HW, Siragusa GR

PMID: 20963614

PloS one. 2011-01-01; 6.6: e21740.

Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse

Ping J, Keleta L, Forbes NE, Dankar S, Stecho W, Tyler S, Zhou Y, Babiuk L, Weingartl H, Halpin RA, Boyne A, Bera J, Hostetler J, Fedorova NB, Proudfoot K, Katzel DA, Stockwell TB, Ghedin E, Spiro DJ, Brown EG

PMID: 21738783

Methods in enzymology. 2011-01-01; 498.349-61.

Enzymatic assembly of overlapping DNA fragments

Gibson DG

PMID: 21601685

Journal of virology. 2011-01-01; 85.1: 357-65.

PB2 residue 158 is a pathogenic determinant of pandemic H1N1 and H5 influenza a viruses in mice

Zhou B, Li Y, Halpin R, Hine E, Spiro DJ, Wentworth DE

PMID: 20962098

PloS one. 2011-01-01; 6.12: e20388.

Going deeper: metagenome of a hadopelagic microbial community

Eloe EA, Fadrosh DW, Novotny M, Zeigler Allen L, Kim M, Lombardo MJ, Yee-Greenbaum J, Yooseph S, Allen EE, Lasken R, Williamson SJ, Bartlett DH

PMID: 21629664

Nature protocols. 2011-01-01; 6.1: 89-96.

Isolation of circular yeast artificial chromosomes for synthetic biology and functional genomics studies

Noskov VN, Chuang RY, Gibson DG, Leem SH, Larionov V, Kouprina N

PMID: 21212778

PloS one. 2011-01-01; 6.12: e28886.

GlyGly-CTERM and rhombosortase: a C-terminal protein processing signal in a many-to-one pairing with a rhomboid family intramembrane serine protease

Haft DH, Varghese N

PMID: 22194940

Journal of bacteriology. 2011-01-01; 193.2: 551-62.

Genome annotation and intraviral interactome for the Streptococcus pneumoniae virulent phage Dp-1

Sabri M, Häuser R, Ouellette M, Liu J, Dehbi M, Moeck G, García E, Titz B, Uetz P, Moineau S

PMID: 21097633

PloS one. 2011-01-01; 6.12: e26554.

Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies

Pieper R, Zhang Q, Clark DJ, Huang ST, Suh MJ, Braisted JC, Payne SH, Fleischmann RD, Peterson SN, Tzipori S

PMID: 22087229

Genome biology. 2011-01-01; 12.1: R4.

Strong functional patterns in the evolution of eukaryotic genomes revealed by the reconstruction of ancestral protein domain repertoires

Zmasek CM, Godzik A

PMID: 21241503