Publications

Nucleic acids research. 2005-01-01; 33.Database issue: 5503-11.
Analysis of the transcriptome of the protozoan Theileria parva using MPSS reveals that the majority of genes are transcriptionally active in the schizont stage
Bishop R, Shah T, Pelle R, Hoyle D, Pearson T, Haines L, Brass A, Hulme H, Graham SP, Taracha EL, Kanga S, Lu C, Hass B, Wortman J, White O, Gardner MJ, Nene V, de Villiers EP
PMID: 16186131
Nucleic acids research. 2005-01-01; 33.Database issue: D71-4.
The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes
Lee Y, Tsai J, Sunkara S, Karamycheva S, Pertea G, Sultana R, Antonescu V, Chan A, Cheung F, Quackenbush J
PMID: 15608288
PLoS biology. 2005-01-01; 3.1: e13.
Sorghum genome sequencing by methylation filtration
Bedell JA, Budiman MA, Nunberg A, Citek RW, Robbins D, Jones J, Flick E, Rholfing T, Fries J, Bradford K, McMenamy J, Smith M, Holeman H, Roe BA, Wiley G, Korf IF, Rabinowicz PD, Lakey N, McCombie WR, Jeddeloh JA, Martienssen RA
PMID: 15660154
Genome biology. 2005-01-01; 6.1: 341.
The first decade of microbial genomics: what have we learned and where are we going next?
Rasko DA, Mongodin EF
PMID: 16168094
Genome biology. 2005-01-01; 6.1: 310.
Ways to get from plant genomes to phenomes: via yeast
Rabinowicz PD, Rensink W
PMID: 15774037
Genome biology. 2005-01-01; 6.1: R23.
Serendipitous discovery of Wolbachia genomes in multiple Drosophila species
Salzberg SL, Dunning Hotopp JC, Delcher AL, Pop M, Smith DR, Eisen MB, Nelson WC
PMID: 15774024
Journal of bacteriology. 2005-01-01; 187.1: 366-75.
Identification of a Dichelobacter nodosus ferric uptake regulator and determination of its regulatory targets
Parker D, Kennan RM, Myers GS, Paulsen IT, Rood JI
PMID: 15601721
Nucleic acids research. 2005-01-01; 33.Database issue: D201-5.
InterPro, progress and status in 2005
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bork P, Bucher P, Cerutti L, Copley R, Courcelle E, Das U, Durbin R, Fleischmann W, Gough J, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McDowall J, Mitchell A, Nikolskaya AN, Orchard S, Pagni M, Ponting CP, Quevillon E, Selengut J, Sigrist CJ, Silventoinen V, Studholme DJ, Vaughan R, Wu CH
PMID: 15608177
Genome biology. 2005-01-01; 6.1: 347.
Microbial metagenomics
Mongodin EF, Emerson JB, Nelson KE
PMID: 16207365
Nucleic acids research. 2005-01-01; 33.Database issue: 6688-93.
The genetic map and comparative analysis with the physical map of Trypanosoma brucei
Macleod A, Tweedie A, McLellan S, Taylor S, Hall N, Berriman M, El-Sayed NM, Hope M, Turner CM, Tait A
PMID: 16314301